RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 CCDC28BQ9BUN5 200 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 EPS8L2Q9H6S3 715 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 LRRC19Q9H756 370 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 ZDHHC4Q9NPG8 344 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 NINJ2Q9NZG7 142 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 ZNF215Q9UL58 517 aaPredicted RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 GOLGA8KD6RF30 607 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 SERPINB7O75635 380 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 RGS19P49795 217 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 PPP5CP53041 499 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 CYP4F2P78329 520 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 AMPD2Q01433 879 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 CYP4F3Q08477 520 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 GRIK4Q16099 956 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 ACCSLQ4AC99 568 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 PDCD4Q53EL6 469 aaKnown RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 SYDE2Q5VT97 1194 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 IQSEC1Q6DN90 963 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 R3HCC1LQ7Z5L2 792 aaKnown RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 SESTD1Q86VW0 696 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 PSTKQ8IV42 348 aaKnown RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 BANPQ8N9N5 519 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 SEPT8Q92599 483 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 ZNF669Q96BR6 464 aaPredicted RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 PPP1R16BQ96T49 567 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 AP5M1Q9H0R1 490 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 COX16Q9P0S2 106 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 DENND2AQ9ULE3 1009 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 DERAQ9Y315 318 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 UBR2Q8IWV8 1755 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 USP17L5A8MUK1 530 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 B4E1Z4 1266 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 BACH1O14867 736 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 PCDH17O14917 1159 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 HGSO14964 777 aaPredicted RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 SYNCRIPO60506 623 aaKnown RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 RECQL4O94761 1208 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 CCNDBP1O95273 360 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 CFBP00751 764 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 M6PRP20645 277 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 DSG3P32926 999 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 BMI1P35226 326 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 CEBPZQ03701 1054 aaKnown RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 KCNH2Q12809 1159 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 XRCC4Q13426 336 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 PEX6Q13608 980 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 SLC9A5Q14940 896 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 EZH2Q15910 746 aaKnown RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 MCMDC2Q4G0Z9 681 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 PERM1Q5SV97 790 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 IFIT1BQ5T764 474 aaKnown RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 YOD1Q5VVQ6 348 aaPredicted RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 CXorf57Q6NSI4 855 aaKnown RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 C4orf22Q6V702 233 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 C16orf59Q7L2K0 433 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 VSIG10LQ86VR7 867 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 LRRC6Q86X45 466 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 MPP5Q8N3R9 675 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 GPR156Q8NFN8 814 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 RIN3Q8TB24 985 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 SH3RF3Q8TEJ3 882 aaPredicted RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 GATAD2BQ8WXI9 593 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 PTP4A1Q93096 173 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 TMX3Q96JJ7 454 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 RIPOR3Q96MK2 946 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 UHRF1Q96T88 793 aaPredicted RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 TXN2Q99757 166 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 TRIM2Q9C040 744 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 ARHGAP39Q9C0H5 1083 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 TLR7Q9NYK1 1049 aaKnown RBP6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 ATP6V1HQ9UI12 483 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 GGA2Q9UJY4 613 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 SPATA2Q9UM82 520 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 AP3M1Q9Y2T2 418 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 COMMD3-BMI1R4GMX3 469 aa6.06□□□□□ -1.44
COL4A3BP-207ENST00000604926 DDX60Q8IY21 1712 aaKnown RBP6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 DPPA5A6NC42 116 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 SMCO2A6NFE2 343 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 HSBP1L1C9JCN9 74 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 H0YIV9 168 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 FPGTO14772 594 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 ZBTB24O43167 697 aaPredicted RBP6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 RASSF9O75901 435 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 FARP2O94887 1054 aaPredicted RBP6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 LRG1P02750 347 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 ASNSP08243 561 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 TIMP2P16035 220 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 PTPN2P17706 415 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 DPP6P42658 865 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 GATMP50440 423 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 IFI35P80217 286 aaPredicted RBP6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 S100A12P80511 92 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 RHAGQ02094 409 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 FKBP4Q02790 459 aaKnown RBP eCLIP6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 PPIL2Q13356 520 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 PTPAQ15257 358 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 LLGL1Q15334 1064 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 PARP6Q2NL67 630 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 PKDCCQ504Y2 493 aa6.05□□□□□ -1.44
COL4A3BP-207ENST00000604926 GPR158Q5T848 1215 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms