RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 SLC24A1O60721 1099 aa11.45□□□□□ -0.58
COL4A3BP-207ENST00000604926 CCDC180Q9P1Z9 1646 aa11.09□□□□□ -0.63
COL4A3BP-207ENST00000604926 NISCHQ9Y2I1 1504 aa10.99□□□□□ -0.65
COL4A3BP-207ENST00000604926 MYT1Q01538 1121 aa10.76□□□□□ -0.69
COL4A3BP-207ENST00000604926 PELP1Q8IZL8 1130 aaKnown RBP10.69□□□□□ -0.7
COL4A3BP-207ENST00000604926 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.71
COL4A3BP-207ENST00000604926 SHROOM4Q9ULL8 1493 aa10.59□□□□□ -0.71
COL4A3BP-207ENST00000604926 TTBK1Q5TCY1 1321 aaPredicted RBP10.59□□□□□ -0.71
COL4A3BP-207ENST00000604926 DAXXQ9UER7 740 aaPredicted RBP10.56□□□□□ -0.72
COL4A3BP-207ENST00000604926 MYO15BQ96JP2 1530 aa10.49□□□□□ -0.73
COL4A3BP-207ENST00000604926 APLP2Q06481 763 aa10.48□□□□□ -0.73
COL4A3BP-207ENST00000604926 ERICH6Q7L0X2 663 aa10.38□□□□□ -0.75
COL4A3BP-207ENST00000604926 EHMT2Q96KQ7 1210 aa10.21□□□□□ -0.78
COL4A3BP-207ENST00000604926 PLPPR3Q6T4P5 718 aa10.19□□□□□ -0.78
COL4A3BP-207ENST00000604926 NCBP3Q53F19 620 aaKnown RBP10.09□□□□□ -0.79
COL4A3BP-207ENST00000604926 RTN4Q9NQC3 1192 aaKnown RBP10.09□□□□□ -0.79
COL4A3BP-207ENST00000604926 DCAF1Q9Y4B6 1507 aa10.06□□□□□ -0.8
COL4A3BP-207ENST00000604926 NACADO15069 1562 aa10.01□□□□□ -0.81
COL4A3BP-207ENST00000604926 UNC13AQ9UPW8 1703 aa10□□□□□ -0.81
COL4A3BP-207ENST00000604926 RB1CC1Q8TDY2 1594 aa9.95□□□□□ -0.82
COL4A3BP-207ENST00000604926 EIF5BO60841 1220 aaKnown RBP9.91□□□□□ -0.82
COL4A3BP-207ENST00000604926 TIMELESSQ9UNS1 1208 aa9.8□□□□□ -0.84
COL4A3BP-207ENST00000604926 BCL11AQ9H165 835 aa9.77□□□□□ -0.85
COL4A3BP-207ENST00000604926 ARXQ96QS3 562 aa9.76□□□□□ -0.85
COL4A3BP-207ENST00000604926 PLEKHG5O94827 1062 aa9.75□□□□□ -0.85
COL4A3BP-207ENST00000604926 KLHL34Q8N239 644 aa9.7□□□□□ -0.86
COL4A3BP-207ENST00000604926 CUX2O14529 1486 aa9.68□□□□□ -0.86
COL4A3BP-207ENST00000604926 RANGAP1P46060 587 aaPredicted RBP9.66□□□□□ -0.86
COL4A3BP-207ENST00000604926 BICRAQ9NZM4 1560 aa9.64□□□□□ -0.87
COL4A3BP-207ENST00000604926 AMER1Q5JTC6 1135 aaPredicted RBP9.61□□□□□ -0.87
COL4A3BP-207ENST00000604926 FAM9AQ8IZU1 332 aaPredicted RBP9.61□□□□□ -0.87
COL4A3BP-207ENST00000604926 TULP1O00294 542 aaPredicted RBP9.6□□□□□ -0.87
COL4A3BP-207ENST00000604926 KCNA4P22459 653 aa9.52□□□□□ -0.88
COL4A3BP-207ENST00000604926 HOMEZQ8IX15 550 aa9.46□□□□□ -0.9
COL4A3BP-207ENST00000604926 PODXL2Q9NZ53 605 aa9.46□□□□□ -0.9
COL4A3BP-207ENST00000604926 TAOK2Q9UL54 1235 aa9.4□□□□□ -0.9
COL4A3BP-207ENST00000604926 PEG3Q9GZU2 1588 aa9.4□□□□□ -0.9
COL4A3BP-207ENST00000604926 DNAJC5Q9H3Z4 198 aa9.39□□□□□ -0.91
COL4A3BP-207ENST00000604926 SMARCA2P51531 1590 aa9.38□□□□□ -0.91
COL4A3BP-207ENST00000604926 CHIC1Q5VXU3 224 aa9.37□□□□□ -0.91
COL4A3BP-207ENST00000604926 ABCC9O60706 1549 aa9.37□□□□□ -0.91
COL4A3BP-207ENST00000604926 PRDM2Q13029 1718 aa9.35□□□□□ -0.91
COL4A3BP-207ENST00000604926 AEBP2Q6ZN18 517 aaPredicted RBP9.33□□□□□ -0.92
COL4A3BP-207ENST00000604926 CSRNP3Q8WYN3 585 aa9.3□□□□□ -0.92
COL4A3BP-207ENST00000604926 TPRNQ4KMQ1 711 aa9.28□□□□□ -0.92
COL4A3BP-207ENST00000604926 ZCCHC6Q5VYS8 1495 aaKnown RBP9.27□□□□□ -0.93
COL4A3BP-207ENST00000604926 CC2D2AQ9P2K1 1620 aa9.26□□□□□ -0.93
COL4A3BP-207ENST00000604926 HMGXB3Q12766 1538 aa9.25□□□□□ -0.93
COL4A3BP-207ENST00000604926 WDR97A6NE52 1622 aa9.23□□□□□ -0.93
COL4A3BP-207ENST00000604926 NPM2Q86SE8 214 aaKnown RBP9.23□□□□□ -0.93
COL4A3BP-207ENST00000604926 EIF4G1Q04637 1599 aaKnown RBP9.22□□□□□ -0.93
COL4A3BP-207ENST00000604926 UBE2Q2Q8WVN8 375 aa9.19□□□□□ -0.94
COL4A3BP-207ENST00000604926 PDIA4P13667 645 aaKnown RBP9.19□□□□□ -0.94
COL4A3BP-207ENST00000604926 THOC2Q8NI27 1593 aaKnown RBP9.16□□□□□ -0.94
COL4A3BP-207ENST00000604926 C14orf37Q86TY3 774 aa9.16□□□□□ -0.94
COL4A3BP-207ENST00000604926 GTF3C3Q9Y5Q9 886 aa9.14□□□□□ -0.95
COL4A3BP-207ENST00000604926 BCANQ96GW7 911 aa9.13□□□□□ -0.95
COL4A3BP-207ENST00000604926 BAZ1BQ9UIG0 1483 aaKnown RBP9.1□□□□□ -0.95
COL4A3BP-207ENST00000604926 LOC105371045A0A1W2PR82 267 aa9.1□□□□□ -0.95
COL4A3BP-207ENST00000604926 HRCP23327 699 aa9.08□□□□□ -0.96
COL4A3BP-207ENST00000604926 DNAJC5BQ9UF47 199 aa9.08□□□□□ -0.96
COL4A3BP-207ENST00000604926 PDE4CQ08493 712 aa9.07□□□□□ -0.96
COL4A3BP-207ENST00000604926 SCAF1Q9H7N4 1312 aaKnown RBP9.05□□□□□ -0.96
COL4A3BP-207ENST00000604926 HAP1P54257 671 aaPredicted RBP9.04□□□□□ -0.96
COL4A3BP-207ENST00000604926 PKNOX2Q96KN3 472 aa9.04□□□□□ -0.96
COL4A3BP-207ENST00000604926 CHMP4AQ9BY43 222 aa9.03□□□□□ -0.96
COL4A3BP-207ENST00000604926 LAMC3Q9Y6N6 1575 aa9.02□□□□□ -0.97
COL4A3BP-207ENST00000604926 TRIM26Q12899 539 aaPredicted RBP9.01□□□□□ -0.97
COL4A3BP-207ENST00000604926 DHX37Q8IY37 1157 aaKnown RBP8.99□□□□□ -0.97
COL4A3BP-207ENST00000604926 ANO8Q9HCE9 1232 aaPredicted RBP8.99□□□□□ -0.97
COL4A3BP-207ENST00000604926 CECR2Q9BXF3 1484 aa8.99□□□□□ -0.97
COL4A3BP-207ENST00000604926 CENPBP07199 599 aaPredicted RBP8.97□□□□□ -0.97
COL4A3BP-207ENST00000604926 NCAPD3P42695 1498 aa8.95□□□□□ -0.98
COL4A3BP-207ENST00000604926 NEFLP07196 543 aa8.95□□□□□ -0.98
COL4A3BP-207ENST00000604926 TMEM132AQ24JP5 1023 aa8.93□□□□□ -0.98
COL4A3BP-207ENST00000604926 SAMD1Q6SPF0 538 aaPredicted RBP8.93□□□□□ -0.98
COL4A3BP-207ENST00000604926 PLCB2Q00722 1185 aa8.92□□□□□ -0.98
COL4A3BP-207ENST00000604926 BCL11BQ9C0K0 894 aaPredicted RBP8.92□□□□□ -0.98
COL4A3BP-207ENST00000604926 WDR62O43379 1518 aa8.92□□□□□ -0.98
COL4A3BP-207ENST00000604926 FBXO3Q9UK99 471 aa8.92□□□□□ -0.98
COL4A3BP-207ENST00000604926 SUPT5HO00267 1087 aaKnown RBP8.87□□□□□ -0.99
COL4A3BP-207ENST00000604926 TAF7LQ5H9L4 462 aa8.87□□□□□ -0.99
COL4A3BP-207ENST00000604926 UBTFP17480 764 aaKnown RBP8.84□□□□□ -0.99
COL4A3BP-207ENST00000604926 BRD2P25440 801 aaKnown RBP8.82□□□□□ -1
COL4A3BP-207ENST00000604926 FGD1P98174 961 aa8.82□□□□□ -1
COL4A3BP-207ENST00000604926 SMARCA4P51532 1647 aa8.79□□□□□ -1
COL4A3BP-207ENST00000604926 DCAF8L2P0C7V8 631 aa8.78□□□□□ -1
COL4A3BP-207ENST00000604926 CDK11BP21127 795 aaKnown RBP8.78□□□□□ -1
COL4A3BP-207ENST00000604926 CNKSR2Q8WXI2 1034 aa8.78□□□□□ -1
COL4A3BP-207ENST00000604926 CDK11AQ9UQ88 783 aaPredicted RBP8.78□□□□□ -1
COL4A3BP-207ENST00000604926 ANP32EQ9BTT0 268 aa8.77□□□□□ -1.01
COL4A3BP-207ENST00000604926 PPP6R1Q9UPN7 881 aa8.77□□□□□ -1.01
COL4A3BP-207ENST00000604926 CCDC136Q96JN2 1154 aa8.74□□□□□ -1.01
COL4A3BP-207ENST00000604926 IGSF3O75054 1194 aa8.72□□□□□ -1.01
COL4A3BP-207ENST00000604926 BAZ1AQ9NRL2 1556 aaPredicted RBP8.71□□□□□ -1.01
COL4A3BP-207ENST00000604926 A0A0U1RQG5 324 aaPredicted RBP8.67□□□□□ -1.02
COL4A3BP-207ENST00000604926 KIF21AQ7Z4S6 1674 aa8.67□□□□□ -1.02
COL4A3BP-207ENST00000604926 IRX6P78412 446 aaPredicted RBP8.65□□□□□ -1.02
COL4A3BP-207ENST00000604926 PAXIP1Q6ZW49 1069 aaPredicted RBP8.65□□□□□ -1.02
COL4A3BP-207ENST00000604926 CFAP44Q96MT7 982 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms