RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 DPH5Q9H2P9 285 aa20.3■□□□□ 0.84
RPAIN-210ENST00000571613 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.3■□□□□ 0.84
RPAIN-210ENST00000571613 TANC1Q9C0D5 1861 aa20.3■□□□□ 0.84
RPAIN-210ENST00000571613 TTC3P53804 2025 aa20.3■□□□□ 0.84
RPAIN-210ENST00000571613 SF3B1O75533 1304 aaKnown RBP eCLIP20.3■□□□□ 0.84
RPAIN-210ENST00000571613 B4GALT3O60512 393 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 CLTBP09497 229 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 CYP2C18P33260 490 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 KCNJ1P48048 391 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 DAOAP59103 153 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 SNX1Q13596 522 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 PTK6Q13882 451 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 BYSLQ13895 437 aaKnown RBP20.29■□□□□ 0.84
RPAIN-210ENST00000571613 CCDC142Q17RM4 750 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 ERMARDQ5T6L9 678 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 ZNF365Q70YC5 407 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 DEFB106AQ8N104 65 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 BBOF1Q8ND07 529 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 ZMIZ2Q8NF64 920 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 PEBP4Q96S96 227 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 ULBP1Q9BZM6 244 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 ZCWPW1Q9H0M4 648 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 C11orf49Q9H6J7 331 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 PRDM16Q9HAZ2 1276 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 TMEM51Q9NW97 253 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 DNAJB4Q9UDY4 337 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 MTRF1LQ9UGC7 380 aaKnown RBP20.29■□□□□ 0.84
RPAIN-210ENST00000571613 ATP11BQ9Y2G3 1177 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 TSC2P49815 1807 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 OR6C75A6NL08 312 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 HHLA1C9JL84 531 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 CAPN9O14815 690 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 LIASO43766 372 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 ZBED1O96006 694 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 BDNFP23560 247 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 ARSEP51690 589 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 KRT17Q04695 432 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 CALCOCO2Q13137 446 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 SH3PXD2AQ5TCZ1 1133 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 ALS2CLQ60I27 953 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 ANKS1BQ7Z6G8 1248 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 ATG4AQ8WYN0 398 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 NKD2Q969F2 451 aaPredicted RBP20.29■□□□□ 0.84
RPAIN-210ENST00000571613 NT5C3BQ969T7 300 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 FMO2Q99518 471 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 ZNF670Q9BS34 389 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 CALN1Q9BXU9 219 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 TSPYL1Q9H0U9 437 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 WHRNQ9P202 907 aa20.29■□□□□ 0.84
RPAIN-210ENST00000571613 R3HDM2Q9Y2K5 976 aaKnown RBP20.29■□□□□ 0.84
RPAIN-210ENST00000571613 CARNS1A5YM72 827 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 TBKBP1A7MCY6 615 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 CST8O60676 142 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 ITIH2P19823 946 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 ECHS1P30084 290 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 SULT1E1P49888 294 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 AIF1P55008 147 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 CAV1Q03135 178 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 SMARCB1Q12824 385 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 DCAF6Q58WW2 860 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 PM20D1Q6GTS8 502 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 ZNF280DQ6N043 979 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 VSTM1Q6UX27 236 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 CYP4V2Q6ZWL3 525 aaPredicted RBP20.28■□□□□ 0.84
RPAIN-210ENST00000571613 BEND5Q7L4P6 421 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 RFX6Q8HWS3 928 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 FAM71BQ8TC56 605 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.28■□□□□ 0.84
RPAIN-210ENST00000571613 ACSF2Q96CM8 615 aaPredicted RBP20.28■□□□□ 0.84
RPAIN-210ENST00000571613 PKNOX2Q96KN3 472 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 KCNK16Q96T55 309 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 SLC9A7Q96T83 725 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 TRIM31Q9BZY9 425 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 HPCAL4Q9UM19 191 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 SNX24Q9Y343 169 aa20.28■□□□□ 0.84
RPAIN-210ENST00000571613 H7C4K7 107 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 APOC4-APOC2K7ER74 178 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 EFCAB14O75071 495 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 APOC2P02655 101 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 ITGAVP06756 1048 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 VCPP55072 806 aaKnown RBP20.27■□□□□ 0.84
RPAIN-210ENST00000571613 C1QTNF8P60827 252 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 MTMR3Q13615 1198 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 TRADDQ15628 312 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 HSP90B2PQ58FF3 399 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 SPDYCQ5MJ68 293 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 VARS2Q5ST30 1063 aaKnown RBP20.27■□□□□ 0.84
RPAIN-210ENST00000571613 DEFB128Q7Z7B8 93 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 LRRTM3Q86VH5 581 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 DDX42Q86XP3 938 aaKnown RBP eCLIP20.27■□□□□ 0.84
RPAIN-210ENST00000571613 NPY6RQ99463 290 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 SNRNP25Q9BV90 132 aaKnown RBP20.27■□□□□ 0.84
RPAIN-210ENST00000571613 ASIC3Q9UHC3 531 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 ZNF148Q9UQR1 794 aa20.27■□□□□ 0.84
RPAIN-210ENST00000571613 ABHD14A-ACY1A0A1B0GW23 586 aa20.26■□□□□ 0.83
RPAIN-210ENST00000571613 F8W810 466 aa20.26■□□□□ 0.83
RPAIN-210ENST00000571613 F9P00740 461 aa20.26■□□□□ 0.83
RPAIN-210ENST00000571613 LTFP02788 710 aa20.26■□□□□ 0.83
RPAIN-210ENST00000571613 HSPA8P11142 646 aaKnown RBP20.26■□□□□ 0.83
RPAIN-210ENST00000571613 ZFXP17010 805 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms