RNA–Protein interactions for RNA: YPR038W

IRC16, Transcript of Dubious open reading frame, yeast

Gene IRC16, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC16	YPR038W	ALG14	P38242	237 aa		4.94	□□□□□ -1.62
IRC16	YPR038W	HEH2	Q03281	663 aa		4.94	□□□□□ -1.62
IRC16	YPR038W	NHA1	Q99271	985 aa		4.94	□□□□□ -1.62
IRC16	YPR038W	NCL1	P38205	684 aa	Known RBP	4.93	□□□□□ -1.62
IRC16	YPR038W	CWH41	P53008	833 aa		4.93	□□□□□ -1.62
IRC16	YPR038W	ROM1	P53046	1155 aa		4.93	□□□□□ -1.62
IRC16	YPR038W	ECM23	Q02710	187 aa		4.93	□□□□□ -1.62
IRC16	YPR038W	TRS33	Q99394	268 aa		4.93	□□□□□ -1.62
IRC16	YPR038W	MAC1	P35192	417 aa		4.92	□□□□□ -1.62
IRC16	YPR038W	PGM2	P37012	569 aa	Known RBP	4.92	□□□□□ -1.62
IRC16	YPR038W	TPS3	P38426	1054 aa	Known RBP	4.92	□□□□□ -1.62
IRC16	YPR038W	PUP1	P25043	261 aa		4.91	□□□□□ -1.62
IRC16	YPR038W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
IRC16	YPR038W	NGR1	P32831	672 aa	Known RBP	4.91	□□□□□ -1.62
IRC16	YPR038W	SCD5	P34758	872 aa		4.91	□□□□□ -1.62
IRC16	YPR038W	UBX7	P38349	436 aa		4.91	□□□□□ -1.62
IRC16	YPR038W	YPL034W	Q03083	165 aa		4.91	□□□□□ -1.62
IRC16	YPR038W	PUF6	Q04373	656 aa	Known RBP	4.91	□□□□□ -1.62
IRC16	YPR038W	UTP4	Q06679	776 aa	Known RBP	4.91	□□□□□ -1.62
IRC16	YPR038W	KAP122	P32767	1081 aa		4.89	□□□□□ -1.63
IRC16	YPR038W	PRK1	P40494	810 aa		4.89	□□□□□ -1.63
IRC16	YPR038W	CUS1	Q02554	436 aa	Predicted RBP	4.89	□□□□□ -1.63
IRC16	YPR038W	ALO1	P54783	526 aa	Known RBP	4.88	□□□□□ -1.63
IRC16	YPR038W	APM2	P38700	605 aa		4.87	□□□□□ -1.63
IRC16	YPR038W	SKP1	P52286	194 aa		4.87	□□□□□ -1.63
IRC16	YPR038W	BUD9	P53226	547 aa		4.87	□□□□□ -1.63
IRC16	YPR038W	NAR1	P23503	491 aa	Known RBP	4.86	□□□□□ -1.63
IRC16	YPR038W	SUB2	Q07478	446 aa	Known RBP	4.86	□□□□□ -1.63
IRC16	YPR038W	NOB1	Q08444	459 aa	Known RBP	4.86	□□□□□ -1.63
IRC16	YPR038W	OMA1	P36163	345 aa		4.85	□□□□□ -1.63
IRC16	YPR038W	HXT5	P38695	592 aa		4.85	□□□□□ -1.63
IRC16	YPR038W	YNR040W	P53736	256 aa		4.85	□□□□□ -1.63
IRC16	YPR038W	GIS4	Q04233	774 aa		4.85	□□□□□ -1.63
IRC16	YPR038W	GLT1	Q12680	2145 aa	Known RBP	4.85	□□□□□ -1.63
IRC16	YPR038W	SRS2	P12954	1174 aa		4.84	□□□□□ -1.63
IRC16	YPR038W	RRM3	P38766	723 aa		4.84	□□□□□ -1.63
IRC16	YPR038W	QDR2	P40474	542 aa		4.84	□□□□□ -1.63
IRC16	YPR038W	PUN1	Q06991	263 aa		4.84	□□□□□ -1.63
IRC16	YPR038W	ALD4	P46367	519 aa	Known RBP	4.83	□□□□□ -1.64
IRC16	YPR038W	YML083C	Q04526	418 aa		4.83	□□□□□ -1.64
IRC16	YPR038W	GAS5	Q08193	484 aa		4.83	□□□□□ -1.64
IRC16	YPR038W	SAC7	P17121	654 aa		4.82	□□□□□ -1.64
IRC16	YPR038W	SUV3	P32580	737 aa		4.82	□□□□□ -1.64
IRC16	YPR038W	CWC15	Q03772	175 aa	Known RBP	4.82	□□□□□ -1.64
IRC16	YPR038W	CAB1	Q04430	367 aa		4.82	□□□□□ -1.64
IRC16	YPR038W	AI3	P03877	415 aa		4.81	□□□□□ -1.64
IRC16	YPR038W	RPC31	P17890	251 aa		4.81	□□□□□ -1.64
IRC16	YPR038W	MRPL33	P20084	86 aa		4.8	□□□□□ -1.64
IRC16	YPR038W	YBR197C	P38306	217 aa		4.8	□□□□□ -1.64
IRC16	YPR038W	DYS1	P38791	387 aa		4.8	□□□□□ -1.64
IRC16	YPR038W	RPL34A	P87262	121 aa	Predicted RBP	4.8	□□□□□ -1.64
IRC16	YPR038W	FOX2	Q02207	900 aa	Known RBP	4.8	□□□□□ -1.64
IRC16	YPR038W	TAF7	Q05021	590 aa		4.8	□□□□□ -1.64
IRC16	YPR038W	SSA1	P10591	642 aa	Known RBP	4.79	□□□□□ -1.64
IRC16	YPR038W	COQ2	P32378	372 aa		4.79	□□□□□ -1.64
IRC16	YPR038W	RRN6	P32786	894 aa		4.79	□□□□□ -1.64
IRC16	YPR038W	ARI1	P53111	347 aa	Known RBP	4.79	□□□□□ -1.64
IRC16	YPR038W	MRP10	O75012	95 aa		4.78	□□□□□ -1.64
IRC16	YPR038W	IDI1	P15496	288 aa		4.78	□□□□□ -1.64
IRC16	YPR038W	ISC10	P32645	267 aa		4.78	□□□□□ -1.64
IRC16	YPR038W	LDH1	P38139	375 aa		4.78	□□□□□ -1.64
IRC16	YPR038W	PNP1	Q05788	311 aa		4.78	□□□□□ -1.64
IRC16	YPR038W	VMA3	P25515	160 aa		4.77	□□□□□ -1.65
IRC16	YPR038W	SFA1	P32771	386 aa		4.77	□□□□□ -1.65
IRC16	YPR038W	YBR287W	P38355	427 aa		4.77	□□□□□ -1.65
IRC16	YPR038W	INP52	P50942	1183 aa		4.77	□□□□□ -1.65
IRC16	YPR038W	ITC1	P53125	1264 aa		4.77	□□□□□ -1.65
IRC16	YPR038W	SLP1	Q12232	587 aa		4.77	□□□□□ -1.65
IRC16	YPR038W	RSC6	P25632	483 aa		4.76	□□□□□ -1.65
IRC16	YPR038W	YOR296W	Q08748	1289 aa		4.76	□□□□□ -1.65
IRC16	YPR038W	FUR4	P05316	633 aa	Known RBP	4.75	□□□□□ -1.65
IRC16	YPR038W	KAE1	P36132	386 aa		4.75	□□□□□ -1.65
IRC16	YPR038W	ISW1	P38144	1129 aa		4.75	□□□□□ -1.65
IRC16	YPR038W	GIP1	P38229	639 aa		4.75	□□□□□ -1.65
IRC16	YPR038W	YER156C	P40093	338 aa	Known RBP	4.75	□□□□□ -1.65
IRC16	YPR038W	PGM1	P33401	570 aa	Known RBP	4.74	□□□□□ -1.65
IRC16	YPR038W	FIR1	P40020	876 aa		4.74	□□□□□ -1.65
IRC16	YPR038W	GIP2	P40036	548 aa		4.74	□□□□□ -1.65
IRC16	YPR038W	TED1	P40533	473 aa		4.74	□□□□□ -1.65
IRC16	YPR038W	YJL181W	P46987	611 aa		4.74	□□□□□ -1.65
IRC16	YPR038W	SOK2	P53438	785 aa	Predicted RBP	4.74	□□□□□ -1.65
IRC16	YPR038W	RSC2	Q06488	889 aa		4.74	□□□□□ -1.65
IRC16	YPR038W	MED7	Q08278	222 aa		4.74	□□□□□ -1.65
IRC16	YPR038W	LSO1	Q3E827	93 aa		4.74	□□□□□ -1.65
IRC16	YPR038W	TY4B-P	A0A0B7P3V8	1104 aa		4.73	□□□□□ -1.65
IRC16	YPR038W	BSD2	P38356	321 aa		4.73	□□□□□ -1.65
IRC16	YPR038W	IRC24	P40580	263 aa		4.73	□□□□□ -1.65
IRC16	YPR038W	APC11	Q12157	165 aa		4.73	□□□□□ -1.65
IRC16	YPR038W	TY4A-H	Q6Q5P6	413 aa		4.73	□□□□□ -1.65
IRC16	YPR038W	LIP5	P32875	414 aa		4.72	□□□□□ -1.65
IRC16	YPR038W	GEF1	P37020	779 aa		4.72	□□□□□ -1.65
IRC16	YPR038W	HXT8	P40886	569 aa		4.72	□□□□□ -1.65
IRC16	YPR038W	DSE4	P53753	1117 aa		4.72	□□□□□ -1.65
IRC16	YPR038W	TRP3	P00937	484 aa		4.71	□□□□□ -1.66
IRC16	YPR038W	CHS2	P14180	963 aa		4.71	□□□□□ -1.66
IRC16	YPR038W	MSN1	P22148	382 aa		4.71	□□□□□ -1.66
IRC16	YPR038W	CDC3	P32457	520 aa	Known RBP	4.71	□□□□□ -1.66
IRC16	YPR038W	SMC1	P32908	1225 aa		4.71	□□□□□ -1.66
IRC16	YPR038W	AVT1	P47082	602 aa		4.7	□□□□□ -1.66
IRC16	YPR038W	PPT1	P53043	513 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms