RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	AI1	P03875	834 aa		5.74	□□□□□ -1.49
TSR4	YOL022C	RPP1A	P05318	106 aa	Predicted RBP	5.74	□□□□□ -1.49
TSR4	YOL022C	PDC5	P16467	563 aa	Known RBP	5.74	□□□□□ -1.49
TSR4	YOL022C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
TSR4	YOL022C	BOI1	P38041	980 aa	Known RBP	5.74	□□□□□ -1.49
TSR4	YOL022C	YNR040W	P53736	256 aa		5.74	□□□□□ -1.49
TSR4	YOL022C	PNP1	Q05788	311 aa		5.74	□□□□□ -1.49
TSR4	YOL022C	KNS1	P32350	737 aa	Predicted RBP	5.73	□□□□□ -1.49
TSR4	YOL022C	KTR2	P33550	425 aa		5.73	□□□□□ -1.49
TSR4	YOL022C	MDJ1	P35191	511 aa		5.73	□□□□□ -1.49
TSR4	YOL022C	PRK1	P40494	810 aa		5.72	□□□□□ -1.49
TSR4	YOL022C	SBE2	P42223	864 aa	Known RBP	5.72	□□□□□ -1.49
TSR4	YOL022C	HEH2	Q03281	663 aa		5.72	□□□□□ -1.49
TSR4	YOL022C	APC11	Q12157	165 aa		5.72	□□□□□ -1.49
TSR4	YOL022C	NCL1	P38205	684 aa	Known RBP	5.71	□□□□□ -1.5
TSR4	YOL022C	BSD2	P38356	321 aa		5.71	□□□□□ -1.5
TSR4	YOL022C	APM2	P38700	605 aa		5.71	□□□□□ -1.5
TSR4	YOL022C	DYS1	P38791	387 aa		5.71	□□□□□ -1.5
TSR4	YOL022C	BOL3	P39724	118 aa		5.71	□□□□□ -1.5
TSR4	YOL022C	ITC1	P53125	1264 aa		5.71	□□□□□ -1.5
TSR4	YOL022C	YOR296W	Q08748	1289 aa		5.71	□□□□□ -1.5
TSR4	YOL022C	PHM7	Q12252	991 aa		5.71	□□□□□ -1.5
TSR4	YOL022C	THI72	Q08579	599 aa		5.7	□□□□□ -1.5
TSR4	YOL022C	LSO1	Q3E827	93 aa		5.7	□□□□□ -1.5
TSR4	YOL022C	LDH1	P38139	375 aa		5.69	□□□□□ -1.5
TSR4	YOL022C	ICP55	P40051	511 aa		5.69	□□□□□ -1.5
TSR4	YOL022C	NSG2	P53898	299 aa		5.69	□□□□□ -1.5
TSR4	YOL022C	SSA1	P10591	642 aa	Known RBP	5.68	□□□□□ -1.5
TSR4	YOL022C	IDI1	P15496	288 aa		5.68	□□□□□ -1.5
TSR4	YOL022C	MSN1	P22148	382 aa		5.68	□□□□□ -1.5
TSR4	YOL022C	YER156C	P40093	338 aa	Known RBP	5.68	□□□□□ -1.5
TSR4	YOL022C	RPB10	P22139	70 aa		5.67	□□□□□ -1.5
TSR4	YOL022C	GIP1	P38229	639 aa		5.67	□□□□□ -1.5
TSR4	YOL022C	MRP10	O75012	95 aa		5.66	□□□□□ -1.5
TSR4	YOL022C	RRN6	P32786	894 aa		5.66	□□□□□ -1.5
TSR4	YOL022C	TDA6	Q06466	467 aa		5.66	□□□□□ -1.5
TSR4	YOL022C	ISW1	P38144	1129 aa		5.65	□□□□□ -1.5
TSR4	YOL022C	MCX1	P38323	520 aa	Predicted RBP	5.65	□□□□□ -1.5
TSR4	YOL022C	HXT8	P40886	569 aa		5.65	□□□□□ -1.5
TSR4	YOL022C	RPL34A	P87262	121 aa	Predicted RBP	5.65	□□□□□ -1.5
TSR4	YOL022C	RGD2	P43556	714 aa		5.64	□□□□□ -1.51
TSR4	YOL022C	PUS1	Q12211	544 aa	Known RBP	5.64	□□□□□ -1.51
TSR4	YOL022C	FUR4	P05316	633 aa	Known RBP	5.63	□□□□□ -1.51
TSR4	YOL022C	GEF1	P37020	779 aa		5.63	□□□□□ -1.51
TSR4	YOL022C	YIL165C	P40446	119 aa		5.63	□□□□□ -1.51
TSR4	YOL022C	YNR014W	P53719	212 aa		5.63	□□□□□ -1.51
TSR4	YOL022C	MTC5	Q03897	1148 aa		5.63	□□□□□ -1.51
TSR4	YOL022C	GIS4	Q04233	774 aa		5.63	□□□□□ -1.51
TSR4	YOL022C	NAR1	P23503	491 aa	Known RBP	5.62	□□□□□ -1.51
TSR4	YOL022C	BOI2	P39969	1040 aa		5.62	□□□□□ -1.51
TSR4	YOL022C	SUT1	P53032	299 aa	Known RBP	5.62	□□□□□ -1.51
TSR4	YOL022C	EMG1	Q06287	252 aa	Known RBP	5.62	□□□□□ -1.51
TSR4	YOL022C	YPR053C	Q6Q5F3	151 aa		5.62	□□□□□ -1.51
TSR4	YOL022C	YCK2	P23292	546 aa	Known RBP	5.61	□□□□□ -1.51
TSR4	YOL022C	MET1	P36150	593 aa		5.61	□□□□□ -1.51
TSR4	YOL022C	PGM2	P37012	569 aa	Known RBP	5.61	□□□□□ -1.51
TSR4	YOL022C	NTA1	P40354	457 aa		5.61	□□□□□ -1.51
TSR4	YOL022C	KAR5	Q04746	504 aa		5.61	□□□□□ -1.51
TSR4	YOL022C	SKN7	P38889	622 aa		5.6	□□□□□ -1.51
TSR4	YOL022C	ATG1	P53104	897 aa		5.6	□□□□□ -1.51
TSR4	YOL022C	YDR215C	Q12240	137 aa		5.6	□□□□□ -1.51
TSR4	YOL022C	CDC3	P32457	520 aa	Known RBP	5.59	□□□□□ -1.51
TSR4	YOL022C	ALG14	P38242	237 aa		5.59	□□□□□ -1.51
TSR4	YOL022C	PPT1	P53043	513 aa		5.59	□□□□□ -1.51
TSR4	YOL022C	TIF6	Q12522	245 aa	Known RBP	5.59	□□□□□ -1.51
TSR4	YOL022C	TRL1	P09880	827 aa	Known RBP	5.58	□□□□□ -1.52
TSR4	YOL022C	GLO3	P38682	493 aa	Known RBP	5.58	□□□□□ -1.52
TSR4	YOL022C	RAD55	P38953	406 aa		5.58	□□□□□ -1.52
TSR4	YOL022C	QDR1	P40475	563 aa		5.58	□□□□□ -1.52
TSR4	YOL022C	CCT8	P47079	568 aa	Known RBP	5.58	□□□□□ -1.52
TSR4	YOL022C	YMR187C	Q03236	431 aa		5.58	□□□□□ -1.52
TSR4	YOL022C	RSC2	Q06488	889 aa		5.58	□□□□□ -1.52
TSR4	YOL022C	NHA1	Q99271	985 aa		5.58	□□□□□ -1.52
TSR4	YOL022C	SMC1	P32908	1225 aa		5.57	□□□□□ -1.52
TSR4	YOL022C	AIM46	P38885	310 aa		5.57	□□□□□ -1.52
TSR4	YOL022C	FIR1	P40020	876 aa		5.57	□□□□□ -1.52
TSR4	YOL022C	IRS4	P36115	615 aa	Known RBP	5.56	□□□□□ -1.52
TSR4	YOL022C	SLN1	P39928	1220 aa	Predicted RBP	5.56	□□□□□ -1.52
TSR4	YOL022C	PSY2	P40164	858 aa		5.56	□□□□□ -1.52
TSR4	YOL022C	LSB3	P43603	459 aa	Known RBP	5.56	□□□□□ -1.52
TSR4	YOL022C	TFA2	P36145	328 aa		5.55	□□□□□ -1.52
TSR4	YOL022C	YBR287W	P38355	427 aa		5.55	□□□□□ -1.52
TSR4	YOL022C	ACF4	P47129	309 aa		5.55	□□□□□ -1.52
TSR4	YOL022C	ALD3	P54114	506 aa		5.55	□□□□□ -1.52
TSR4	YOL022C	ERP5	P38819	212 aa		5.54	□□□□□ -1.52
TSR4	YOL022C	INP51	P40559	946 aa	Known RBP	5.54	□□□□□ -1.52
TSR4	YOL022C	MDJ2	P42834	146 aa		5.54	□□□□□ -1.52
TSR4	YOL022C	YJL181W	P46987	611 aa		5.54	□□□□□ -1.52
TSR4	YOL022C	BUD9	P53226	547 aa		5.54	□□□□□ -1.52
TSR4	YOL022C	MNL2	Q12205	849 aa		5.54	□□□□□ -1.52
TSR4	YOL022C	SLP1	Q12232	587 aa		5.54	□□□□□ -1.52
TSR4	YOL022C	AMN1	P38285	549 aa	Predicted RBP	5.53	□□□□□ -1.52
TSR4	YOL022C	PRY1	P47032	299 aa		5.53	□□□□□ -1.52
TSR4	YOL022C	BIO5	P53744	561 aa	Known RBP	5.53	□□□□□ -1.52
TSR4	YOL022C	UFD2	P54860	961 aa		5.53	□□□□□ -1.52
TSR4	YOL022C	SOG2	Q08817	791 aa		5.53	□□□□□ -1.52
TSR4	YOL022C	FUS1	P11710	512 aa		5.52	□□□□□ -1.53
TSR4	YOL022C	CTR9	P89105	1077 aa		5.52	□□□□□ -1.53
TSR4	YOL022C	RSC4	Q02206	625 aa		5.52	□□□□□ -1.53
TSR4	YOL022C	TRS120	Q04183	1289 aa		5.52	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms