RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W JJJ2P46997 583 aa5.41□□□□□ -1.54
TRM112YNR046W OXR1Q08952 273 aa5.41□□□□□ -1.54
TRM112YNR046W DAL1P32375 460 aa5.4□□□□□ -1.54
TRM112YNR046W KAP122P32767 1081 aa5.4□□□□□ -1.54
TRM112YNR046W RPT1P33299 467 aaKnown RBP5.4□□□□□ -1.54
TRM112YNR046W MET1P36150 593 aa5.4□□□□□ -1.54
TRM112YNR046W CIC1P38779 376 aaKnown RBP5.4□□□□□ -1.54
TRM112YNR046W RAD55P38953 406 aa5.4□□□□□ -1.54
TRM112YNR046W QDR2P40474 542 aa5.4□□□□□ -1.54
TRM112YNR046W AIR1P40507 360 aaKnown RBP5.4□□□□□ -1.54
TRM112YNR046W PTK2P47116 818 aaKnown RBP5.4□□□□□ -1.54
TRM112YNR046W YNL165WP53891 406 aa5.4□□□□□ -1.54
TRM112YNR046W RSC4Q02206 625 aa5.4□□□□□ -1.54
TRM112YNR046W IRE1P32361 1115 aa5.39□□□□□ -1.55
TRM112YNR046W NTA1P40354 457 aa5.39□□□□□ -1.55
TRM112YNR046W NOC3Q07896 663 aaPredicted RBP5.39□□□□□ -1.55
TRM112YNR046W MSN1P22148 382 aa5.38□□□□□ -1.55
TRM112YNR046W KTR2P33550 425 aa5.38□□□□□ -1.55
TRM112YNR046W ISW1P38144 1129 aa5.38□□□□□ -1.55
TRM112YNR046W DAK2P43550 591 aa5.38□□□□□ -1.55
TRM112YNR046W NUP85P46673 744 aa5.38□□□□□ -1.55
TRM112YNR046W VTC4P47075 721 aa5.38□□□□□ -1.55
TRM112YNR046W LSC2P53312 427 aa5.38□□□□□ -1.55
TRM112YNR046W RMD1Q03441 430 aa5.38□□□□□ -1.55
TRM112YNR046W BSC2Q05611 235 aa5.38□□□□□ -1.55
TRM112YNR046W RPS31P05759 152 aaKnown RBP5.37□□□□□ -1.55
TRM112YNR046W IRS4P36115 615 aaKnown RBP5.37□□□□□ -1.55
TRM112YNR046W YJR115WP47152 169 aa5.37□□□□□ -1.55
TRM112YNR046W MTO1P53070 669 aa5.37□□□□□ -1.55
TRM112YNR046W JIP5Q06214 492 aaPredicted RBP5.37□□□□□ -1.55
TRM112YNR046W DPS1P04802 557 aaKnown RBP5.36□□□□□ -1.55
TRM112YNR046W DLD1P32891 587 aa5.36□□□□□ -1.55
TRM112YNR046W SHM1P37292 490 aaPredicted RBP5.36□□□□□ -1.55
TRM112YNR046W GIP1P38229 639 aa5.36□□□□□ -1.55
TRM112YNR046W PEP7P32609 515 aa5.35□□□□□ -1.55
TRM112YNR046W SLA1P32790 1244 aa5.35□□□□□ -1.55
TRM112YNR046W PSY2P40164 858 aa5.35□□□□□ -1.55
TRM112YNR046W FYV10P40492 516 aa5.35□□□□□ -1.55
TRM112YNR046W RGD2P43556 714 aa5.35□□□□□ -1.55
TRM112YNR046W YJR098CP47139 656 aa5.35□□□□□ -1.55
TRM112YNR046W ORC1P54784 914 aaPredicted RBP5.35□□□□□ -1.55
TRM112YNR046W YOR296WQ08748 1289 aa5.35□□□□□ -1.55
TRM112YNR046W LEU1P07264 779 aaKnown RBP5.34□□□□□ -1.55
TRM112YNR046W RPC31P17890 251 aa5.34□□□□□ -1.55
TRM112YNR046W PDC6P26263 563 aaKnown RBP5.34□□□□□ -1.55
TRM112YNR046W MCM2P29469 868 aa5.34□□□□□ -1.55
TRM112YNR046W ECM2P38241 364 aaKnown RBP5.34□□□□□ -1.55
TRM112YNR046W TIF6Q12522 245 aaKnown RBP5.34□□□□□ -1.55
TRM112YNR046W YHL008CP38750 627 aa5.33□□□□□ -1.56
TRM112YNR046W AIM46P38885 310 aa5.33□□□□□ -1.56
TRM112YNR046W RPS26AP39938 119 aaKnown RBP5.33□□□□□ -1.56
TRM112YNR046W RPS26BP39939 119 aaKnown RBP5.33□□□□□ -1.56
TRM112YNR046W MAD1P40957 749 aa5.33□□□□□ -1.56
TRM112YNR046W NNF1P47149 201 aa5.33□□□□□ -1.56
TRM112YNR046W YGR122WP53272 402 aa5.33□□□□□ -1.56
TRM112YNR046W UBP2Q01476 1272 aa5.33□□□□□ -1.56
TRM112YNR046W SPR28Q04921 423 aa5.33□□□□□ -1.56
TRM112YNR046W YLR346CQ06139 101 aa5.33□□□□□ -1.56
TRM112YNR046W ESF1Q06344 628 aaKnown RBP5.33□□□□□ -1.56
TRM112YNR046W PSH1Q12161 406 aa5.33□□□□□ -1.56
TRM112YNR046W RPP1AP05318 106 aaPredicted RBP5.32□□□□□ -1.56
TRM112YNR046W CLN2P20438 545 aa5.32□□□□□ -1.56
TRM112YNR046W UBP15P50101 1230 aa5.32□□□□□ -1.56
TRM112YNR046W YCS4Q06156 1176 aa5.32□□□□□ -1.56
TRM112YNR046W INP54Q08227 384 aaKnown RBP5.32□□□□□ -1.56
TRM112YNR046W TY1A-DR3Q12441 440 aa5.32□□□□□ -1.56
TRM112YNR046W TCB1Q12466 1186 aa5.32□□□□□ -1.56
TRM112YNR046W KAR2P16474 682 aaKnown RBP5.31□□□□□ -1.56
TRM112YNR046W RGP1P16664 663 aa5.31□□□□□ -1.56
TRM112YNR046W BSD2P38356 321 aa5.31□□□□□ -1.56
TRM112YNR046W SKP1P52286 194 aa5.31□□□□□ -1.56
TRM112YNR046W GCR2Q01722 534 aa5.31□□□□□ -1.56
TRM112YNR046W CUS1Q02554 436 aaPredicted RBP5.31□□□□□ -1.56
TRM112YNR046W FLP1P03870 423 aa5.3□□□□□ -1.56
TRM112YNR046W HXK1P04806 485 aaKnown RBP5.3□□□□□ -1.56
TRM112YNR046W CYC8P14922 966 aa5.3□□□□□ -1.56
TRM112YNR046W MNR2P35724 969 aa5.3□□□□□ -1.56
TRM112YNR046W MRPS18P42847 217 aa5.3□□□□□ -1.56
TRM112YNR046W DAL4Q04895 635 aa5.3□□□□□ -1.56
TRM112YNR046W RAD2P07276 1031 aa5.29□□□□□ -1.56
TRM112YNR046W TRK1P12685 1235 aa5.29□□□□□ -1.56
TRM112YNR046W APM2P38700 605 aa5.29□□□□□ -1.56
TRM112YNR046W EMG1Q06287 252 aaKnown RBP5.29□□□□□ -1.56
TRM112YNR046W MAG2Q06436 670 aaKnown RBP5.29□□□□□ -1.56
TRM112YNR046W MCD1Q12158 566 aa5.29□□□□□ -1.56
TRM112YNR046W NAB2P32505 525 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
TRM112YNR046W PRP40P33203 583 aaKnown RBP5.28□□□□□ -1.56
TRM112YNR046W NCL1P38205 684 aaKnown RBP5.28□□□□□ -1.56
TRM112YNR046W OCA5P38738 679 aa5.28□□□□□ -1.56
TRM112YNR046W YIL165CP40446 119 aa5.28□□□□□ -1.56
TRM112YNR046W PIN2Q12057 282 aa5.28□□□□□ -1.56
TRM112YNR046W PET112P33893 541 aa5.27□□□□□ -1.57
TRM112YNR046W RVS167P39743 482 aaKnown RBP5.27□□□□□ -1.57
TRM112YNR046W VPS16Q03308 798 aa5.27□□□□□ -1.57
TRM112YNR046W YTA7P40340 1379 aa5.27□□□□□ -1.57
TRM112YNR046W PRE9P23638 258 aaKnown RBP5.26□□□□□ -1.57
TRM112YNR046W MRPL16P38064 232 aa5.26□□□□□ -1.57
TRM112YNR046W OSH7P38755 437 aa5.26□□□□□ -1.57
TRM112YNR046W FAA3P39002 694 aa5.26□□□□□ -1.57
TRM112YNR046W ITC1P53125 1264 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms