RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C KAP122P32767 1081 aa5.65□□□□□ -1.5
ATG3YNR007C NCL1P38205 684 aaKnown RBP5.65□□□□□ -1.5
ATG3YNR007C CWH41P53008 833 aa5.64□□□□□ -1.51
ATG3YNR007C ECM23Q02710 187 aa5.64□□□□□ -1.51
ATG3YNR007C YCK2P23292 546 aaKnown RBP5.63□□□□□ -1.51
ATG3YNR007C CUS1Q02554 436 aaPredicted RBP5.63□□□□□ -1.51
ATG3YNR007C YDR215CQ12240 137 aa5.63□□□□□ -1.51
ATG3YNR007C TRS33Q99394 268 aa5.63□□□□□ -1.51
ATG3YNR007C RPC31P17890 251 aa5.61□□□□□ -1.51
ATG3YNR007C APM2P38700 605 aa5.61□□□□□ -1.51
ATG3YNR007C SLN1P39928 1220 aaPredicted RBP5.61□□□□□ -1.51
ATG3YNR007C PRK1P40494 810 aa5.61□□□□□ -1.51
ATG3YNR007C SBP1P10080 294 aaKnown RBP5.6□□□□□ -1.51
ATG3YNR007C QDR2P40474 542 aa5.6□□□□□ -1.51
ATG3YNR007C NHA1Q99271 985 aa5.6□□□□□ -1.51
ATG3YNR007C SUV3P32580 737 aa5.59□□□□□ -1.51
ATG3YNR007C TAT1P38085 619 aa5.59□□□□□ -1.51
ATG3YNR007C ALG14P38242 237 aa5.59□□□□□ -1.51
ATG3YNR007C UBX7P38349 436 aa5.59□□□□□ -1.51
ATG3YNR007C CAB1Q04430 367 aa5.59□□□□□ -1.51
ATG3YNR007C CPS1P27614 576 aa5.58□□□□□ -1.52
ATG3YNR007C PGM2P37012 569 aaKnown RBP5.58□□□□□ -1.52
ATG3YNR007C TPS3P38426 1054 aaKnown RBP5.58□□□□□ -1.52
ATG3YNR007C YNR040WP53736 256 aa5.58□□□□□ -1.52
ATG3YNR007C AMN1P38285 549 aaPredicted RBP5.57□□□□□ -1.52
ATG3YNR007C MRPL33P20084 86 aa5.56□□□□□ -1.52
ATG3YNR007C PUP1P25043 261 aa5.56□□□□□ -1.52
ATG3YNR007C LSB6P42951 607 aa5.56□□□□□ -1.52
ATG3YNR007C MCA1Q08601 432 aa5.56□□□□□ -1.52
ATG3YNR007C NAR1P23503 491 aaKnown RBP5.55□□□□□ -1.52
ATG3YNR007C VMA3P25515 160 aa5.55□□□□□ -1.52
ATG3YNR007C YBR197CP38306 217 aa5.55□□□□□ -1.52
ATG3YNR007C DYS1P38791 387 aa5.55□□□□□ -1.52
ATG3YNR007C PRY1P47032 299 aa5.55□□□□□ -1.52
ATG3YNR007C GIS4Q04233 774 aa5.55□□□□□ -1.52
ATG3YNR007C PUF6Q04373 656 aaKnown RBP5.55□□□□□ -1.52
ATG3YNR007C NRD1P53617 575 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
ATG3YNR007C FOX2Q02207 900 aaKnown RBP5.54□□□□□ -1.52
ATG3YNR007C YOR296WQ08748 1289 aa5.54□□□□□ -1.52
ATG3YNR007C IDI1P15496 288 aa5.53□□□□□ -1.52
ATG3YNR007C YER156CP40093 338 aaKnown RBP5.53□□□□□ -1.52
ATG3YNR007C ALD4P46367 519 aaKnown RBP5.53□□□□□ -1.52
ATG3YNR007C ITC1P53125 1264 aa5.53□□□□□ -1.52
ATG3YNR007C BUD9P53226 547 aa5.53□□□□□ -1.52
ATG3YNR007C LDH1P38139 375 aa5.52□□□□□ -1.53
ATG3YNR007C GIP1P38229 639 aa5.52□□□□□ -1.53
ATG3YNR007C YPL034WQ03083 165 aa5.52□□□□□ -1.53
ATG3YNR007C SSA4P22202 642 aaKnown RBP5.51□□□□□ -1.53
ATG3YNR007C NAB2P32505 525 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
ATG3YNR007C PUN1Q06991 263 aa5.51□□□□□ -1.53
ATG3YNR007C MRP10O75012 95 aa5.5□□□□□ -1.53
ATG3YNR007C SRS2P12954 1174 aa5.5□□□□□ -1.53
ATG3YNR007C ISC10P32645 267 aa5.5□□□□□ -1.53
ATG3YNR007C SLP1Q12232 587 aa5.5□□□□□ -1.53
ATG3YNR007C ISW1P38144 1129 aa5.49□□□□□ -1.53
ATG3YNR007C BSD2P38356 321 aa5.49□□□□□ -1.53
ATG3YNR007C RSC2Q06488 889 aa5.49□□□□□ -1.53
ATG3YNR007C AI3P03877 415 aa5.48□□□□□ -1.53
ATG3YNR007C RRM3P38766 723 aa5.48□□□□□ -1.53
ATG3YNR007C SAC7P17121 654 aa5.47□□□□□ -1.53
ATG3YNR007C YBR287WP38355 427 aa5.47□□□□□ -1.53
ATG3YNR007C CWC15Q03772 175 aaKnown RBP5.47□□□□□ -1.53
ATG3YNR007C MSN1P22148 382 aa5.46□□□□□ -1.54
ATG3YNR007C SFA1P32771 386 aa5.46□□□□□ -1.54
ATG3YNR007C YIL165CP40446 119 aa5.46□□□□□ -1.54
ATG3YNR007C YML083CQ04526 418 aa5.46□□□□□ -1.54
ATG3YNR007C GAS5Q08193 484 aa5.46□□□□□ -1.54
ATG3YNR007C NOB1Q08444 459 aaKnown RBP5.46□□□□□ -1.54
ATG3YNR007C ARI1P53111 347 aaKnown RBP5.45□□□□□ -1.54
ATG3YNR007C FIR1P40020 876 aa5.44□□□□□ -1.54
ATG3YNR007C GIP2P40036 548 aa5.44□□□□□ -1.54
ATG3YNR007C PPT1P53043 513 aa5.44□□□□□ -1.54
ATG3YNR007C TY4B-PA0A0B7P3V8 1104 aa5.43□□□□□ -1.54
ATG3YNR007C RRN6P32786 894 aa5.43□□□□□ -1.54
ATG3YNR007C PGM1P33401 570 aaKnown RBP5.43□□□□□ -1.54
ATG3YNR007C HXT8P40886 569 aa5.43□□□□□ -1.54
ATG3YNR007C PNP1Q05788 311 aa5.43□□□□□ -1.54
ATG3YNR007C TY4A-HQ6Q5P6 413 aa5.43□□□□□ -1.54
ATG3YNR007C TED1P40533 473 aa5.42□□□□□ -1.54
ATG3YNR007C YJL181WP46987 611 aa5.42□□□□□ -1.54
ATG3YNR007C SOK2P53438 785 aaPredicted RBP5.42□□□□□ -1.54
ATG3YNR007C EMG1Q06287 252 aaKnown RBP5.42□□□□□ -1.54
ATG3YNR007C RSC6P25632 483 aa5.41□□□□□ -1.54
ATG3YNR007C MAC1P35192 417 aa5.41□□□□□ -1.54
ATG3YNR007C INP51P40559 946 aaKnown RBP5.4□□□□□ -1.54
ATG3YNR007C DSE4P53753 1117 aa5.4□□□□□ -1.54
ATG3YNR007C ALO1P54783 526 aaKnown RBP5.4□□□□□ -1.54
ATG3YNR007C APC11Q12157 165 aa5.4□□□□□ -1.54
ATG3YNR007C AIM46P38885 310 aa5.39□□□□□ -1.55
ATG3YNR007C LEM3P42838 414 aa5.39□□□□□ -1.55
ATG3YNR007C GUP1P53154 560 aa5.39□□□□□ -1.55
ATG3YNR007C COQ2P32378 372 aa5.38□□□□□ -1.55
ATG3YNR007C OMA1P36163 345 aa5.38□□□□□ -1.55
ATG3YNR007C RGD2P43556 714 aa5.38□□□□□ -1.55
ATG3YNR007C BIO5P53744 561 aaKnown RBP5.38□□□□□ -1.55
ATG3YNR007C TY1A-NL1Q12391 440 aaKnown RBP5.38□□□□□ -1.55
ATG3YNR007C LSO1Q3E827 93 aa5.38□□□□□ -1.55
ATG3YNR007C KTR2P33550 425 aa5.37□□□□□ -1.55
ATG3YNR007C BOI1P38041 980 aaKnown RBP5.37□□□□□ -1.55
ATG3YNR007C NTA1P40354 457 aa5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 77.1 ms