RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W HEM3P28789 327 aa5.38□□□□□ -1.55
SRP1YNL189W GLY1P37303 387 aaKnown RBP5.38□□□□□ -1.55
SRP1YNL189W LDH1P38139 375 aa5.38□□□□□ -1.55
SRP1YNL189W YTA6P40328 754 aa5.38□□□□□ -1.55
SRP1YNL189W HXT8P40886 569 aa5.38□□□□□ -1.55
SRP1YNL189W THI12P42883 340 aa5.38□□□□□ -1.55
SRP1YNL189W THI5P43534 340 aa5.38□□□□□ -1.55
SRP1YNL189W THI11P47183 340 aa5.38□□□□□ -1.55
SRP1YNL189W THI13Q07748 340 aa5.38□□□□□ -1.55
SRP1YNL189W ATE1P16639 503 aa5.37□□□□□ -1.55
SRP1YNL189W MSN1P22148 382 aa5.37□□□□□ -1.55
SRP1YNL189W BSD2P38356 321 aa5.37□□□□□ -1.55
SRP1YNL189W PPX1P38698 397 aa5.37□□□□□ -1.55
SRP1YNL189W UBP15P50101 1230 aa5.37□□□□□ -1.55
SRP1YNL189W YLR346CQ06139 101 aa5.37□□□□□ -1.55
SRP1YNL189W LCB5Q06147 687 aaKnown RBP5.37□□□□□ -1.55
SRP1YNL189W RPC31P17890 251 aa5.37□□□□□ -1.55
SRP1YNL189W GBP2P25555 427 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SRP1YNL189W SEC20P28791 383 aa5.37□□□□□ -1.55
SRP1YNL189W MET4P32389 672 aa5.37□□□□□ -1.55
SRP1YNL189W SPR3P41901 512 aa5.37□□□□□ -1.55
SRP1YNL189W RGD2P43556 714 aa5.37□□□□□ -1.55
SRP1YNL189W DYS1P38791 387 aa5.36□□□□□ -1.55
SRP1YNL189W SCW11P53189 542 aa5.36□□□□□ -1.55
SRP1YNL189W RGP1P16664 663 aa5.35□□□□□ -1.55
SRP1YNL189W YNR040WP53736 256 aa5.35□□□□□ -1.55
SRP1YNL189W CUS1Q02554 436 aaPredicted RBP5.35□□□□□ -1.55
SRP1YNL189W MRPL16P38064 232 aa5.34□□□□□ -1.55
SRP1YNL189W STB3Q12427 513 aa5.34□□□□□ -1.55
SRP1YNL189W UFD2P54860 961 aa5.34□□□□□ -1.56
SRP1YNL189W RRP15Q06511 250 aaPredicted RBP5.34□□□□□ -1.56
SRP1YNL189W YOR296WQ08748 1289 aa5.34□□□□□ -1.56
SRP1YNL189W TIF6Q12522 245 aaKnown RBP5.34□□□□□ -1.56
SRP1YNL189W RAD55P38953 406 aa5.33□□□□□ -1.56
SRP1YNL189W ROG3P43602 733 aa5.33□□□□□ -1.56
SRP1YNL189W POL32P47110 350 aa5.33□□□□□ -1.56
SRP1YNL189W CCP1P00431 361 aa5.32□□□□□ -1.56
SRP1YNL189W SMC1P32908 1225 aa5.32□□□□□ -1.56
SRP1YNL189W GIP1P38229 639 aa5.32□□□□□ -1.56
SRP1YNL189W YIR007WP40566 764 aa5.32□□□□□ -1.56
SRP1YNL189W SKP1P52286 194 aa5.32□□□□□ -1.56
SRP1YNL189W ITC1P53125 1264 aa5.32□□□□□ -1.56
SRP1YNL189W TY1A-MR1Q04215 440 aa5.32□□□□□ -1.56
SRP1YNL189W NTA1P40354 457 aa5.31□□□□□ -1.56
SRP1YNL189W YNL011CP53980 444 aa5.31□□□□□ -1.56
SRP1YNL189W PHO4P07270 312 aaKnown RBP5.3□□□□□ -1.56
SRP1YNL189W ISW1P38144 1129 aa5.3□□□□□ -1.56
SRP1YNL189W FIR1P40020 876 aa5.3□□□□□ -1.56
SRP1YNL189W PSY2P40164 858 aa5.3□□□□□ -1.56
SRP1YNL189W CAF120P53836 1060 aa5.3□□□□□ -1.56
SRP1YNL189W CUZ1P53899 274 aa5.3□□□□□ -1.56
SRP1YNL189W RSC4Q02206 625 aa5.3□□□□□ -1.56
SRP1YNL189W YPL062WQ02781 134 aa5.3□□□□□ -1.56
SRP1YNL189W EMG1Q06287 252 aaKnown RBP5.3□□□□□ -1.56
SRP1YNL189W IRS4P36115 615 aaKnown RBP5.29□□□□□ -1.56
SRP1YNL189W ACO2P39533 789 aa5.29□□□□□ -1.56
SRP1YNL189W CDC55Q00362 526 aa5.29□□□□□ -1.56
SRP1YNL189W TOS4Q06266 489 aa5.29□□□□□ -1.56
SRP1YNL189W DIT1P21623 536 aa5.28□□□□□ -1.56
SRP1YNL189W APM2P38700 605 aa5.28□□□□□ -1.56
SRP1YNL189W YMR265CQ03508 461 aaKnown RBP5.28□□□□□ -1.56
SRP1YNL189W SEC8P32855 1065 aa5.27□□□□□ -1.57
SRP1YNL189W MSC7P38694 644 aa5.27□□□□□ -1.57
SRP1YNL189W AIM46P38885 310 aa5.27□□□□□ -1.57
SRP1YNL189W YIL165CP40446 119 aa5.27□□□□□ -1.57
SRP1YNL189W DAK2P43550 591 aa5.27□□□□□ -1.57
SRP1YNL189W KRE33P53914 1056 aaKnown RBP5.27□□□□□ -1.57
SRP1YNL189W CTR9P89105 1077 aa5.27□□□□□ -1.57
SRP1YNL189W YDL176WQ12027 708 aa5.27□□□□□ -1.57
SRP1YNL189W COBP00163 385 aa5.26□□□□□ -1.57
SRP1YNL189W MCM2P29469 868 aa5.26□□□□□ -1.57
SRP1YNL189W RPT1P33299 467 aaKnown RBP5.26□□□□□ -1.57
SRP1YNL189W DUR3P33413 735 aa5.26□□□□□ -1.57
SRP1YNL189W BSC2Q05611 235 aa5.26□□□□□ -1.57
SRP1YNL189W MRP10O75012 95 aa5.25□□□□□ -1.57
SRP1YNL189W NCL1P38205 684 aaKnown RBP5.25□□□□□ -1.57
SRP1YNL189W ADE12P80210 433 aaKnown RBP5.25□□□□□ -1.57
SRP1YNL189W OYE2Q03558 400 aaKnown RBP5.25□□□□□ -1.57
SRP1YNL189W INP54Q08227 384 aaKnown RBP5.25□□□□□ -1.57
SRP1YNL189W IDI1P15496 288 aa5.24□□□□□ -1.57
SRP1YNL189W FYV10P40492 516 aa5.24□□□□□ -1.57
SRP1YNL189W PYC2P32327 1180 aaKnown RBP5.23□□□□□ -1.57
SRP1YNL189W YJR107WP47145 328 aa5.23□□□□□ -1.57
SRP1YNL189W TY1A-DR2Q03964 440 aaKnown RBP5.23□□□□□ -1.57
SRP1YNL189W NOC3Q07896 663 aaPredicted RBP5.23□□□□□ -1.57
SRP1YNL189W FLP1P03870 423 aa5.23□□□□□ -1.57
SRP1YNL189W FPS1P23900 669 aa5.23□□□□□ -1.57
SRP1YNL189W MET1P36150 593 aa5.23□□□□□ -1.57
SRP1YNL189W YHL008CP38750 627 aa5.23□□□□□ -1.57
SRP1YNL189W SAM37P50110 327 aa5.23□□□□□ -1.57
SRP1YNL189W SPR28Q04921 423 aa5.23□□□□□ -1.57
SRP1YNL189W SYT1Q06836 1226 aa5.23□□□□□ -1.57
SRP1YNL189W ASF1P32447 279 aa5.22□□□□□ -1.57
SRP1YNL189W VPS35P34110 944 aa5.22□□□□□ -1.57
SRP1YNL189W PAM1P37304 830 aaKnown RBP5.22□□□□□ -1.57
SRP1YNL189W MGE1P38523 228 aa5.22□□□□□ -1.57
SRP1YNL189W PRK1P40494 810 aa5.22□□□□□ -1.57
SRP1YNL189W YJL181WP46987 611 aa5.22□□□□□ -1.57
SRP1YNL189W PPT1P53043 513 aa5.22□□□□□ -1.57
SRP1YNL189W SNU71P53207 620 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms