RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W CST6P40535 587 aa9.49□□□□□ -0.89
PRE5YMR314W IRC4Q03036 179 aa9.49□□□□□ -0.89
PRE5YMR314W EAR1Q03212 550 aa9.49□□□□□ -0.89
PRE5YMR314W LCB1P25045 558 aaKnown RBP9.48□□□□□ -0.89
PRE5YMR314W RTR1P40084 226 aaPredicted RBP9.48□□□□□ -0.89
PRE5YMR314W PSF3Q12146 194 aa9.48□□□□□ -0.89
PRE5YMR314W ADR1P07248 1323 aa9.48□□□□□ -0.89
PRE5YMR314W PFK2P16862 959 aaKnown RBP RIP-Chip data9.47□□□□□ -0.89not detected
PRE5YMR314W DLD1P32891 587 aa9.47□□□□□ -0.89
PRE5YMR314W YBR287WP38355 427 aa9.47□□□□□ -0.89
PRE5YMR314W SET1P38827 1080 aaKnown RBP9.47□□□□□ -0.89
PRE5YMR314W PPM2Q08282 695 aa9.47□□□□□ -0.89
PRE5YMR314W WRS1Q12109 432 aaKnown RBP9.47□□□□□ -0.89
PRE5YMR314W FLO1P32768 1537 aa9.46□□□□□ -0.89
PRE5YMR314W JJJ2P46997 583 aa9.46□□□□□ -0.9
PRE5YMR314W ITC1P53125 1264 aa9.46□□□□□ -0.9
PRE5YMR314W PEX29Q03370 554 aa9.46□□□□□ -0.9
PRE5YMR314W ERG7P38604 731 aa9.45□□□□□ -0.9
PRE5YMR314W AAD16Q02895 342 aa9.45□□□□□ -0.9
PRE5YMR314W SRC1Q03707 834 aa9.45□□□□□ -0.9
PRE5YMR314W YDR306CQ06640 478 aa9.45□□□□□ -0.9
PRE5YMR314W NUP133P36161 1157 aa9.44□□□□□ -0.9
PRE5YMR314W LDH1P38139 375 aa9.44□□□□□ -0.9
PRE5YMR314W TPS3P38426 1054 aaKnown RBP9.44□□□□□ -0.9
PRE5YMR314W NUG1P40010 520 aaKnown RBP9.44□□□□□ -0.9
PRE5YMR314W GYP7P48365 746 aa9.44□□□□□ -0.9
PRE5YMR314W VPS62P53285 467 aa9.44□□□□□ -0.9
PRE5YMR314W NET1P47035 1189 aa9.43□□□□□ -0.9
PRE5YMR314W MTC5Q03897 1148 aa9.43□□□□□ -0.9
PRE5YMR314W PSH1Q12161 406 aa9.43□□□□□ -0.9
PRE5YMR314W ATG1P53104 897 aa9.42□□□□□ -0.9
PRE5YMR314W KEL1P38853 1164 aaKnown RBP9.41□□□□□ -0.9
PRE5YMR314W RAD53P22216 821 aa9.4□□□□□ -0.9
PRE5YMR314W WHI3P34761 661 aaKnown RBP9.4□□□□□ -0.9
PRE5YMR314W FIR1P40020 876 aa9.4□□□□□ -0.9
PRE5YMR314W IOC4Q04213 475 aa9.4□□□□□ -0.9
PRE5YMR314W ECM30Q06673 1274 aa9.4□□□□□ -0.9
PRE5YMR314W TY3A-GQ12173 290 aa9.4□□□□□ -0.9
PRE5YMR314W TY3A-IQ99219 290 aa9.4□□□□□ -0.9
PRE5YMR314W SUP35P05453 685 aaKnown RBP9.39□□□□□ -0.91
PRE5YMR314W IXR1P33417 597 aa9.39□□□□□ -0.91
PRE5YMR314W PUS6P53294 404 aa9.39□□□□□ -0.91
PRE5YMR314W FAP1P53971 965 aa9.39□□□□□ -0.91
PRE5YMR314W MRP7P12687 371 aa9.38□□□□□ -0.91
PRE5YMR314W THI22Q06490 572 aa9.38□□□□□ -0.91
PRE5YMR314W YFL040WP43562 540 aa9.37□□□□□ -0.91
PRE5YMR314W YFH7P43591 353 aa9.37□□□□□ -0.91
PRE5YMR314W RTT109Q07794 436 aa9.37□□□□□ -0.91
PRE5YMR314W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.37□□□□□ -0.91not detected
PRE5YMR314W YMR084WA2P2R3 262 aa9.36□□□□□ -0.91
PRE5YMR314W CDC60P26637 1090 aaKnown RBP9.36□□□□□ -0.91
PRE5YMR314W OCT1P35999 772 aa9.36□□□□□ -0.91
PRE5YMR314W SRT1Q03175 343 aa9.36□□□□□ -0.91
PRE5YMR314W CFT2Q12102 859 aaPredicted RBP9.36□□□□□ -0.91
PRE5YMR314W PMA1P05030 918 aaKnown RBP9.35□□□□□ -0.91
PRE5YMR314W ICL2Q12031 575 aa9.35□□□□□ -0.91
PRE5YMR314W MCD4P36051 919 aa9.34□□□□□ -0.91
PRE5YMR314W APL6P46682 809 aa9.34□□□□□ -0.91
PRE5YMR314W SNU66Q12420 587 aaPredicted RBP9.34□□□□□ -0.91
PRE5YMR314W TOR2P32600 2474 aaKnown RBP9.33□□□□□ -0.92
PRE5YMR314W ADP1P25371 1049 aa9.33□□□□□ -0.92
PRE5YMR314W YPL034WQ03083 165 aa9.33□□□□□ -0.92
PRE5YMR314W TOR1P35169 2470 aa9.32□□□□□ -0.92
PRE5YMR314W RPT3P33298 428 aaKnown RBP9.32□□□□□ -0.92
PRE5YMR314W VAB2P40003 282 aa9.32□□□□□ -0.92
PRE5YMR314W FMP30Q02883 468 aa9.32□□□□□ -0.92
PRE5YMR314W YDJ1P25491 409 aaKnown RBP9.31□□□□□ -0.92
PRE5YMR314W AIM21P40563 679 aa9.31□□□□□ -0.92
PRE5YMR314W LYS14P40971 790 aa9.31□□□□□ -0.92
PRE5YMR314W UBP12P39538 1254 aa9.3□□□□□ -0.92
PRE5YMR314W ACA1P39970 489 aa9.3□□□□□ -0.92
PRE5YMR314W YOR131CQ12486 218 aa9.3□□□□□ -0.92
PRE5YMR314W SNF3P10870 884 aa9.29□□□□□ -0.92
PRE5YMR314W HEF3P53978 1044 aaKnown RBP9.29□□□□□ -0.92
PRE5YMR314W DIT2P21595 489 aa9.28□□□□□ -0.92
PRE5YMR314W UIP5P36137 443 aa9.28□□□□□ -0.92
PRE5YMR314W MXR1P40029 184 aa9.28□□□□□ -0.92
PRE5YMR314W HXT10P43581 546 aa9.28□□□□□ -0.92
PRE5YMR314W PRY3P47033 881 aa9.28□□□□□ -0.92
PRE5YMR314W AHC1Q12433 566 aa9.28□□□□□ -0.92
PRE5YMR314W ECM29P38737 1868 aa9.28□□□□□ -0.92
PRE5YMR314W SRS2P12954 1174 aa9.27□□□□□ -0.93
PRE5YMR314W SUT2Q12286 268 aa9.27□□□□□ -0.93
PRE5YMR314W NOP2P40991 618 aaKnown RBP9.26□□□□□ -0.93
PRE5YMR314W YJL007CP47080 104 aa9.26□□□□□ -0.93
PRE5YMR314W MPP10P47083 593 aaKnown RBP9.26□□□□□ -0.93
PRE5YMR314W YGR122WP53272 402 aa9.26□□□□□ -0.93
PRE5YMR314W PCL8Q08966 492 aa9.26□□□□□ -0.93
PRE5YMR314W MDM20Q12387 796 aaKnown RBP9.26□□□□□ -0.93
PRE5YMR314W TUB2P02557 457 aaKnown RBP9.25□□□□□ -0.93
PRE5YMR314W SWC3P31376 625 aa9.25□□□□□ -0.93
PRE5YMR314W PTK1P36002 662 aaPredicted RBP9.25□□□□□ -0.93
PRE5YMR314W YBL028CP38202 106 aa9.25□□□□□ -0.93
PRE5YMR314W GLO3P38682 493 aaKnown RBP9.25□□□□□ -0.93
PRE5YMR314W MSC7P38694 644 aa9.25□□□□□ -0.93
PRE5YMR314W MSH4P40965 878 aaPredicted RBP9.25□□□□□ -0.93
PRE5YMR314W SUB2Q07478 446 aaKnown RBP9.25□□□□□ -0.93
PRE5YMR314W TUS1Q06412 1307 aa9.25□□□□□ -0.93
PRE5YMR314W KIN1P13185 1064 aa9.24□□□□□ -0.93
PRE5YMR314W TPD3P31383 635 aa9.24□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms