RNA–Protein interactions for RNA: YLR455W

PDP3, Transcript of Component of the NuA3b histone acetyltransferase complex, yeast

Gene PDP3, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDP3	YLR455W	MET1	P36150	593 aa		5.07	□□□□□ -1.6
PDP3	YLR455W	MCX1	P38323	520 aa	Predicted RBP	5.07	□□□□□ -1.6
PDP3	YLR455W	CCT8	P47079	568 aa	Known RBP	5.07	□□□□□ -1.6
PDP3	YLR455W	SKP1	P52286	194 aa		5.07	□□□□□ -1.6
PDP3	YLR455W	HEH2	Q03281	663 aa		5.07	□□□□□ -1.6
PDP3	YLR455W	SUV3	P32580	737 aa		5.06	□□□□□ -1.6
PDP3	YLR455W	NCL1	P38205	684 aa	Known RBP	5.06	□□□□□ -1.6
PDP3	YLR455W	SKN7	P38889	622 aa		5.06	□□□□□ -1.6
PDP3	YLR455W	CUS1	Q02554	436 aa	Predicted RBP	5.06	□□□□□ -1.6
PDP3	YLR455W	QDR2	P40474	542 aa		5.05	□□□□□ -1.6
PDP3	YLR455W	CAB1	Q04430	367 aa		5.05	□□□□□ -1.6
PDP3	YLR455W	SSA1	P10591	642 aa	Known RBP	5.04	□□□□□ -1.6
PDP3	YLR455W	RPC31	P17890	251 aa		5.04	□□□□□ -1.6
PDP3	YLR455W	APM2	P38700	605 aa		5.04	□□□□□ -1.6
PDP3	YLR455W	PUF6	Q04373	656 aa	Known RBP	5.04	□□□□□ -1.6
PDP3	YLR455W	YCK2	P23292	546 aa	Known RBP	5.03	□□□□□ -1.6
PDP3	YLR455W	PRK1	P40494	810 aa		5.03	□□□□□ -1.6
PDP3	YLR455W	YNR040W	P53736	256 aa		5.03	□□□□□ -1.6
PDP3	YLR455W	FOX2	Q02207	900 aa	Known RBP	5.03	□□□□□ -1.6
PDP3	YLR455W	MRPL33	P20084	86 aa		5.02	□□□□□ -1.61
PDP3	YLR455W	CWC15	Q03772	175 aa	Known RBP	5.02	□□□□□ -1.61
PDP3	YLR455W	YML083C	Q04526	418 aa		5.02	□□□□□ -1.61
PDP3	YLR455W	YDR215C	Q12240	137 aa		5.02	□□□□□ -1.61
PDP3	YLR455W	VMA3	P25515	160 aa		5.01	□□□□□ -1.61
PDP3	YLR455W	YBR197C	P38306	217 aa		5.01	□□□□□ -1.61
PDP3	YLR455W	ALD4	P46367	519 aa	Known RBP	5.01	□□□□□ -1.61
PDP3	YLR455W	PGM2	P37012	569 aa	Known RBP	5	□□□□□ -1.61
PDP3	YLR455W	GEF1	P37020	779 aa		5	□□□□□ -1.61
PDP3	YLR455W	ALG14	P38242	237 aa		5	□□□□□ -1.61
PDP3	YLR455W	SLN1	P39928	1220 aa	Predicted RBP	5	□□□□□ -1.61
PDP3	YLR455W	PUN1	Q06991	263 aa		5	□□□□□ -1.61
PDP3	YLR455W	NHA1	Q99271	985 aa		5	□□□□□ -1.61
PDP3	YLR455W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	RIP-Chip
PDP3	YLR455W	DYS1	P38791	387 aa		4.99	□□□□□ -1.61
PDP3	YLR455W	NAR1	P23503	491 aa	Known RBP	4.98	□□□□□ -1.61
PDP3	YLR455W	ISC10	P32645	267 aa		4.98	□□□□□ -1.61
PDP3	YLR455W	TAT1	P38085	619 aa		4.98	□□□□□ -1.61
PDP3	YLR455W	LDH1	P38139	375 aa		4.98	□□□□□ -1.61
PDP3	YLR455W	PRY1	P47032	299 aa		4.98	□□□□□ -1.61
PDP3	YLR455W	ITC1	P53125	1264 aa		4.98	□□□□□ -1.61
PDP3	YLR455W	YOR296W	Q08748	1289 aa		4.98	□□□□□ -1.61
PDP3	YLR455W	GLT1	Q12680	2145 aa	Known RBP	4.98	□□□□□ -1.61
PDP3	YLR455W	SRS2	P12954	1174 aa		4.97	□□□□□ -1.61
PDP3	YLR455W	IDI1	P15496	288 aa		4.97	□□□□□ -1.61
PDP3	YLR455W	GIP1	P38229	639 aa		4.97	□□□□□ -1.61
PDP3	YLR455W	TPS3	P38426	1054 aa	Known RBP	4.97	□□□□□ -1.61
PDP3	YLR455W	GIS4	Q04233	774 aa		4.97	□□□□□ -1.61
PDP3	YLR455W	MCA1	Q08601	432 aa		4.97	□□□□□ -1.61
PDP3	YLR455W	SBP1	P10080	294 aa	Known RBP	4.96	□□□□□ -1.62
PDP3	YLR455W	BSD2	P38356	321 aa		4.96	□□□□□ -1.62
PDP3	YLR455W	YER156C	P40093	338 aa	Known RBP	4.96	□□□□□ -1.62
PDP3	YLR455W	MRP10	O75012	95 aa		4.95	□□□□□ -1.62
PDP3	YLR455W	AMN1	P38285	549 aa	Predicted RBP	4.95	□□□□□ -1.62
PDP3	YLR455W	RPL34A	P87262	121 aa	Predicted RBP	4.95	□□□□□ -1.62
PDP3	YLR455W	CDC3	P32457	520 aa	Known RBP	4.94	□□□□□ -1.62
PDP3	YLR455W	ISW1	P38144	1129 aa		4.94	□□□□□ -1.62
PDP3	YLR455W	LSB6	P42951	607 aa		4.94	□□□□□ -1.62
PDP3	YLR455W	BUD9	P53226	547 aa		4.94	□□□□□ -1.62
PDP3	YLR455W	MSN1	P22148	382 aa		4.93	□□□□□ -1.62
PDP3	YLR455W	PNP1	Q05788	311 aa		4.93	□□□□□ -1.62
PDP3	YLR455W	LSO1	Q3E827	93 aa		4.92	□□□□□ -1.62
PDP3	YLR455W	RRN6	P32786	894 aa		4.91	□□□□□ -1.62
PDP3	YLR455W	RRM3	P38766	723 aa		4.91	□□□□□ -1.62
PDP3	YLR455W	YIL165C	P40446	119 aa		4.91	□□□□□ -1.62
PDP3	YLR455W	YPL034W	Q03083	165 aa		4.91	□□□□□ -1.62
PDP3	YLR455W	RSC2	Q06488	889 aa		4.91	□□□□□ -1.62
PDP3	YLR455W	FIR1	P40020	876 aa		4.9	□□□□□ -1.63
PDP3	YLR455W	HXT8	P40886	569 aa		4.9	□□□□□ -1.63
PDP3	YLR455W	GAS5	Q08193	484 aa		4.9	□□□□□ -1.63
PDP3	YLR455W	SLP1	Q12232	587 aa		4.9	□□□□□ -1.63
PDP3	YLR455W	AI3	P03877	415 aa		4.89	□□□□□ -1.63
PDP3	YLR455W	YBR287W	P38355	427 aa		4.89	□□□□□ -1.63
PDP3	YLR455W	YJL181W	P46987	611 aa		4.89	□□□□□ -1.63
PDP3	YLR455W	PPT1	P53043	513 aa		4.89	□□□□□ -1.63
PDP3	YLR455W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
PDP3	YLR455W	EMG1	Q06287	252 aa	Known RBP	4.89	□□□□□ -1.63
PDP3	YLR455W	APC11	Q12157	165 aa		4.89	□□□□□ -1.63
PDP3	YLR455W	SAC7	P17121	654 aa		4.88	□□□□□ -1.63
PDP3	YLR455W	BOI1	P38041	980 aa	Known RBP	4.88	□□□□□ -1.63
PDP3	YLR455W	SUT1	P53032	299 aa	Known RBP	4.88	□□□□□ -1.63
PDP3	YLR455W	TY4B-P	A0A0B7P3V8	1104 aa		4.87	□□□□□ -1.63
PDP3	YLR455W	TRL1	P09880	827 aa	Known RBP	4.87	□□□□□ -1.63
PDP3	YLR455W	KTR2	P33550	425 aa		4.87	□□□□□ -1.63
PDP3	YLR455W	AIM46	P38885	310 aa		4.87	□□□□□ -1.63
PDP3	YLR455W	GIP2	P40036	548 aa		4.87	□□□□□ -1.63
PDP3	YLR455W	TED1	P40533	473 aa		4.87	□□□□□ -1.63
PDP3	YLR455W	SOK2	P53438	785 aa	Predicted RBP	4.87	□□□□□ -1.63
PDP3	YLR455W	TY4A-H	Q6Q5P6	413 aa		4.87	□□□□□ -1.63
PDP3	YLR455W	FUR4	P05316	633 aa	Known RBP	4.86	□□□□□ -1.63
PDP3	YLR455W	SFA1	P32771	386 aa		4.86	□□□□□ -1.63
PDP3	YLR455W	BOL3	P39724	118 aa		4.86	□□□□□ -1.63
PDP3	YLR455W	INP51	P40559	946 aa	Known RBP	4.86	□□□□□ -1.63
PDP3	YLR455W	RGD2	P43556	714 aa		4.86	□□□□□ -1.63
PDP3	YLR455W	ACF4	P47129	309 aa		4.86	□□□□□ -1.63
PDP3	YLR455W	ATG1	P53104	897 aa		4.86	□□□□□ -1.63
PDP3	YLR455W	RPB10	P22139	70 aa		4.85	□□□□□ -1.63
PDP3	YLR455W	NTA1	P40354	457 aa		4.85	□□□□□ -1.63
PDP3	YLR455W	ARI1	P53111	347 aa	Known RBP	4.85	□□□□□ -1.63
PDP3	YLR455W	BIO5	P53744	561 aa	Known RBP	4.84	□□□□□ -1.63
PDP3	YLR455W	KAR5	Q04746	504 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms