RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C ADE12P80210 433 aaKnown RBP8.35□□□□□ -1.07
NMD4YLR363C SYT1Q06836 1226 aa8.35□□□□□ -1.07
NMD4YLR363C HSL1P34244 1518 aa8.34□□□□□ -1.07
NMD4YLR363C SPT6P23615 1451 aaKnown RBP8.34□□□□□ -1.07
NMD4YLR363C VMA3P25515 160 aa8.34□□□□□ -1.07
NMD4YLR363C QDR2P40474 542 aa8.34□□□□□ -1.07
NMD4YLR363C FUR4P05316 633 aaKnown RBP8.33□□□□□ -1.08
NMD4YLR363C FPS1P23900 669 aa8.33□□□□□ -1.08
NMD4YLR363C DYS1P38791 387 aa8.32□□□□□ -1.08
NMD4YLR363C SKP1P52286 194 aa8.32□□□□□ -1.08
NMD4YLR363C LDH1P38139 375 aa8.31□□□□□ -1.08
NMD4YLR363C JJJ3P47138 172 aa8.31□□□□□ -1.08
NMD4YLR363C RPC31P17890 251 aa8.3□□□□□ -1.08
NMD4YLR363C CUS1Q02554 436 aaPredicted RBP8.3□□□□□ -1.08
NMD4YLR363C KAR5Q04746 504 aa8.3□□□□□ -1.08
NMD4YLR363C LSO1Q3E827 93 aa8.3□□□□□ -1.08
NMD4YLR363C TRK2P28584 889 aa8.29□□□□□ -1.08
NMD4YLR363C BOL3P39724 118 aa8.29□□□□□ -1.08
NMD4YLR363C SPA2P23201 1466 aaKnown RBP8.29□□□□□ -1.08
NMD4YLR363C NCL1P38205 684 aaKnown RBP8.27□□□□□ -1.09
NMD4YLR363C APC11Q12157 165 aa8.27□□□□□ -1.09
NMD4YLR363C BOI1P38041 980 aaKnown RBP8.26□□□□□ -1.09
NMD4YLR363C APM2P38700 605 aa8.26□□□□□ -1.09
NMD4YLR363C HEH2Q03281 663 aa8.26□□□□□ -1.09
NMD4YLR363C YOR296WQ08748 1289 aa8.25□□□□□ -1.09
NMD4YLR363C HXT8P40886 569 aa8.24□□□□□ -1.09
NMD4YLR363C GIP1P38229 639 aa8.23□□□□□ -1.09
NMD4YLR363C MSC7P38694 644 aa8.23□□□□□ -1.09
NMD4YLR363C TY1A-DR2Q03964 440 aaKnown RBP8.23□□□□□ -1.09
NMD4YLR363C ISW1P38144 1129 aa8.22□□□□□ -1.09
NMD4YLR363C YBR287WP38355 427 aa8.22□□□□□ -1.09
NMD4YLR363C GLO3P38682 493 aaKnown RBP8.22□□□□□ -1.09
NMD4YLR363C SUT1P53032 299 aaKnown RBP8.22□□□□□ -1.09
NMD4YLR363C ATG1P53104 897 aa8.22□□□□□ -1.09
NMD4YLR363C HAT1Q12341 374 aa8.22□□□□□ -1.09
NMD4YLR363C MSN1P22148 382 aa8.21□□□□□ -1.1
NMD4YLR363C FIR1P40020 876 aa8.21□□□□□ -1.1
NMD4YLR363C YNR040WP53736 256 aa8.21□□□□□ -1.1
NMD4YLR363C GPM1P00950 247 aaKnown RBP8.2□□□□□ -1.1
NMD4YLR363C BSD2P38356 321 aa8.2□□□□□ -1.1
NMD4YLR363C QDR1P40475 563 aa8.2□□□□□ -1.1
NMD4YLR363C RPB10P22139 70 aa8.19□□□□□ -1.1
NMD4YLR363C NAB2P32505 525 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
NMD4YLR363C ITC1P53125 1264 aa8.19□□□□□ -1.1
NMD4YLR363C SMC1P32908 1225 aa8.18□□□□□ -1.1
NMD4YLR363C KTR2P33550 425 aa8.18□□□□□ -1.1
NMD4YLR363C ACF4P47129 309 aa8.18□□□□□ -1.1
NMD4YLR363C TRL1P09880 827 aaKnown RBP8.17□□□□□ -1.1
NMD4YLR363C KNS1P32350 737 aaPredicted RBP8.17□□□□□ -1.1
NMD4YLR363C YBL113CQ7M4S9 792 aa8.17□□□□□ -1.1
NMD4YLR363C AI1P03875 834 aa8.16□□□□□ -1.1
NMD4YLR363C ERP5P38819 212 aa8.16□□□□□ -1.1
NMD4YLR363C HIR3P47171 1648 aa8.15□□□□□ -1.1
NMD4YLR363C ECM5Q03214 1411 aa8.15□□□□□ -1.1
NMD4YLR363C PDC5P16467 563 aaKnown RBP8.15□□□□□ -1.1
NMD4YLR363C YER156CP40093 338 aaKnown RBP8.15□□□□□ -1.1
NMD4YLR363C NTA1P40354 457 aa8.15□□□□□ -1.1
NMD4YLR363C PRK1P40494 810 aa8.15□□□□□ -1.1
NMD4YLR363C RAD55P38953 406 aa8.14□□□□□ -1.11
NMD4YLR363C YIL165CP40446 119 aa8.14□□□□□ -1.11
NMD4YLR363C RGD2P43556 714 aa8.14□□□□□ -1.11
NMD4YLR363C UFD2P54860 961 aa8.14□□□□□ -1.11
NMD4YLR363C BUD4P47136 1447 aa8.13□□□□□ -1.11
NMD4YLR363C IDI1P15496 288 aa8.13□□□□□ -1.11
NMD4YLR363C GRS1P38088 690 aaKnown RBP8.13□□□□□ -1.11
NMD4YLR363C AIM46P38885 310 aa8.12□□□□□ -1.11
NMD4YLR363C EMG1Q06287 252 aaKnown RBP8.12□□□□□ -1.11
NMD4YLR363C RSC2Q06488 889 aa8.12□□□□□ -1.11
NMD4YLR363C THO2P53552 1597 aaKnown RBP8.11□□□□□ -1.11
NMD4YLR363C IRS4P36115 615 aaKnown RBP8.11□□□□□ -1.11
NMD4YLR363C SSF1P38789 453 aaPredicted RBP8.11□□□□□ -1.11
NMD4YLR363C MDJ2P42834 146 aa8.11□□□□□ -1.11
NMD4YLR363C MET1P36150 593 aa8.1□□□□□ -1.11
NMD4YLR363C TRS120Q04183 1289 aa8.1□□□□□ -1.11
NMD4YLR363C THI72Q08579 599 aa8.1□□□□□ -1.11
NMD4YLR363C PSY2P40164 858 aa8.09□□□□□ -1.11
NMD4YLR363C TIF6Q12522 245 aaKnown RBP8.09□□□□□ -1.11
NMD4YLR363C PPT1P53043 513 aa8.07□□□□□ -1.12
NMD4YLR363C NSG2P53898 299 aa8.07□□□□□ -1.12
NMD4YLR363C YFL066CP43538 392 aa8.06□□□□□ -1.12
NMD4YLR363C YNR014WP53719 212 aa8.06□□□□□ -1.12
NMD4YLR363C PHM7Q12252 991 aa8.06□□□□□ -1.12
NMD4YLR363C MDJ1P35191 511 aa8.05□□□□□ -1.12
NMD4YLR363C STM1P39015 273 aaKnown RBP8.05□□□□□ -1.12
NMD4YLR363C ICP55P40051 511 aa8.05□□□□□ -1.12
NMD4YLR363C SBE2P42223 864 aaKnown RBP8.05□□□□□ -1.12
NMD4YLR363C RSC4Q02206 625 aa8.05□□□□□ -1.12
NMD4YLR363C BOI2P39969 1040 aa8.04□□□□□ -1.12
NMD4YLR363C NUT2Q06213 157 aa8.04□□□□□ -1.12
NMD4YLR363C MRP10O75012 95 aa8.03□□□□□ -1.12
NMD4YLR363C PGM2P37012 569 aaKnown RBP8.03□□□□□ -1.12
NMD4YLR363C ALG14P38242 237 aa8.03□□□□□ -1.12
NMD4YLR363C YHL050CP38721 697 aa8.03□□□□□ -1.12
NMD4YLR363C YHR219WP38900 624 aa8.03□□□□□ -1.12
NMD4YLR363C YNL011CP53980 444 aa8.03□□□□□ -1.12
NMD4YLR363C MDS3P53094 1487 aa8.02□□□□□ -1.13
NMD4YLR363C NAR1P23503 491 aaKnown RBP8.02□□□□□ -1.13
NMD4YLR363C YJL181WP46987 611 aa8.02□□□□□ -1.13
NMD4YLR363C GIS4Q04233 774 aa8.02□□□□□ -1.13
NMD4YLR363C MNL2Q12205 849 aa8.02□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms