RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C SPR3P41901 512 aa3.4□□□□□ -1.86
SGD1YLR336C MTO1P53070 669 aa3.4□□□□□ -1.86
SGD1YLR336C CDC19P00549 500 aaKnown RBP3.4□□□□□ -1.87
SGD1YLR336C MSN1P22148 382 aa3.4□□□□□ -1.87
SGD1YLR336C KAP122P32767 1081 aa3.4□□□□□ -1.87
SGD1YLR336C LDH1P38139 375 aa3.4□□□□□ -1.87
SGD1YLR336C THI12P42883 340 aa3.4□□□□□ -1.87
SGD1YLR336C THI5P43534 340 aa3.4□□□□□ -1.87
SGD1YLR336C THI11P47183 340 aa3.4□□□□□ -1.87
SGD1YLR336C RRP15Q06511 250 aaPredicted RBP3.4□□□□□ -1.87
SGD1YLR336C THI13Q07748 340 aa3.4□□□□□ -1.87
SGD1YLR336C RPC31P17890 251 aa3.39□□□□□ -1.87
SGD1YLR336C UBP2Q01476 1272 aa3.39□□□□□ -1.87
SGD1YLR336C LEU1P07264 779 aaKnown RBP3.39□□□□□ -1.87
SGD1YLR336C BSD2P38356 321 aa3.39□□□□□ -1.87
SGD1YLR336C OSH7P38755 437 aa3.39□□□□□ -1.87
SGD1YLR336C DYS1P38791 387 aa3.39□□□□□ -1.87
SGD1YLR336C YTA6P40328 754 aa3.39□□□□□ -1.87
SGD1YLR336C RGD2P43556 714 aa3.39□□□□□ -1.87
SGD1YLR336C NAM8Q00539 523 aaKnown RBP3.39□□□□□ -1.87
SGD1YLR336C TY1A-BLQ12266 440 aa3.39□□□□□ -1.87
SGD1YLR336C POL32P47110 350 aa3.38□□□□□ -1.87
SGD1YLR336C UFD2P54860 961 aa3.38□□□□□ -1.87
SGD1YLR336C YDR444WQ04093 687 aa3.38□□□□□ -1.87
SGD1YLR336C UBP15P50101 1230 aa3.38□□□□□ -1.87
SGD1YLR336C GLY1P37303 387 aaKnown RBP3.37□□□□□ -1.87
SGD1YLR336C CUS1Q02554 436 aaPredicted RBP3.37□□□□□ -1.87
SGD1YLR336C YLR346CQ06139 101 aa3.37□□□□□ -1.87
SGD1YLR336C RGP1P16664 663 aa3.37□□□□□ -1.87
SGD1YLR336C PHO4P07270 312 aaKnown RBP3.36□□□□□ -1.87
SGD1YLR336C SMC1P32908 1225 aa3.36□□□□□ -1.87
SGD1YLR336C GIP1P38229 639 aa3.36□□□□□ -1.87
SGD1YLR336C RAD55P38953 406 aa3.36□□□□□ -1.87
SGD1YLR336C SCW11P53189 542 aa3.36□□□□□ -1.87
SGD1YLR336C YNL011CP53980 444 aa3.36□□□□□ -1.87
SGD1YLR336C LCB5Q06147 687 aaKnown RBP3.36□□□□□ -1.87
SGD1YLR336C YOR296WQ08748 1289 aa3.36□□□□□ -1.87
SGD1YLR336C TIF6Q12522 245 aaKnown RBP3.36□□□□□ -1.87
SGD1YLR336C MRPL16P38064 232 aa3.36□□□□□ -1.87
SGD1YLR336C NTA1P40354 457 aa3.36□□□□□ -1.87
SGD1YLR336C SKP1P52286 194 aa3.36□□□□□ -1.87
SGD1YLR336C YNR040WP53736 256 aa3.36□□□□□ -1.87
SGD1YLR336C RSC4Q02206 625 aa3.36□□□□□ -1.87
SGD1YLR336C ISW1P38144 1129 aa3.35□□□□□ -1.87
SGD1YLR336C FIR1P40020 876 aa3.35□□□□□ -1.87
SGD1YLR336C CDC55Q00362 526 aa3.35□□□□□ -1.87
SGD1YLR336C STB3Q12427 513 aa3.35□□□□□ -1.87
SGD1YLR336C PSY2P40164 858 aa3.35□□□□□ -1.87
SGD1YLR336C DAK2P43550 591 aa3.35□□□□□ -1.87
SGD1YLR336C ITC1P53125 1264 aa3.35□□□□□ -1.87
SGD1YLR336C SEC8P32855 1065 aa3.35□□□□□ -1.87
SGD1YLR336C TOS4Q06266 489 aa3.35□□□□□ -1.87
SGD1YLR336C EMG1Q06287 252 aaKnown RBP3.35□□□□□ -1.87
SGD1YLR336C IRS4P36115 615 aaKnown RBP3.34□□□□□ -1.87
SGD1YLR336C ROG3P43602 733 aa3.34□□□□□ -1.87
SGD1YLR336C CCP1P00431 361 aa3.34□□□□□ -1.88
SGD1YLR336C ASF1P32447 279 aa3.34□□□□□ -1.88
SGD1YLR336C RPT1P33299 467 aaKnown RBP3.34□□□□□ -1.88
SGD1YLR336C APM2P38700 605 aa3.34□□□□□ -1.88
SGD1YLR336C CTR9P89105 1077 aa3.34□□□□□ -1.88
SGD1YLR336C TY1A-MR1Q04215 440 aa3.34□□□□□ -1.88
SGD1YLR336C BSC2Q05611 235 aa3.34□□□□□ -1.88
SGD1YLR336C YIL165CP40446 119 aa3.33□□□□□ -1.88
SGD1YLR336C YJR107WP47145 328 aa3.33□□□□□ -1.88
SGD1YLR336C SNU71P53207 620 aaKnown RBP3.33□□□□□ -1.88
SGD1YLR336C CUZ1P53899 274 aa3.33□□□□□ -1.88
SGD1YLR336C PAM1P37304 830 aaKnown RBP3.33□□□□□ -1.88
SGD1YLR336C OYE2Q03558 400 aaKnown RBP3.33□□□□□ -1.88
SGD1YLR336C COBP00163 385 aa3.32□□□□□ -1.88
SGD1YLR336C DIT1P21623 536 aa3.32□□□□□ -1.88
SGD1YLR336C MSC7P38694 644 aa3.32□□□□□ -1.88
SGD1YLR336C AIM46P38885 310 aa3.32□□□□□ -1.88
SGD1YLR336C FYV10P40492 516 aa3.32□□□□□ -1.88
SGD1YLR336C YIR007WP40566 764 aa3.32□□□□□ -1.88
SGD1YLR336C MCM2P29469 868 aa3.32□□□□□ -1.88
SGD1YLR336C MET1P36150 593 aa3.32□□□□□ -1.88
SGD1YLR336C MGE1P38523 228 aa3.32□□□□□ -1.88
SGD1YLR336C ACO2P39533 789 aa3.32□□□□□ -1.88
SGD1YLR336C NOC3Q07896 663 aaPredicted RBP3.32□□□□□ -1.88
SGD1YLR336C INP54Q08227 384 aaKnown RBP3.32□□□□□ -1.88
SGD1YLR336C DUR3P33413 735 aa3.31□□□□□ -1.88
SGD1YLR336C SAM37P50110 327 aa3.31□□□□□ -1.88
SGD1YLR336C CAF120P53836 1060 aa3.31□□□□□ -1.88
SGD1YLR336C SPR28Q04921 423 aa3.31□□□□□ -1.88
SGD1YLR336C NCL1P38205 684 aaKnown RBP3.31□□□□□ -1.88
SGD1YLR336C KRE33P53914 1056 aaKnown RBP3.31□□□□□ -1.88
SGD1YLR336C YMR265CQ03508 461 aaKnown RBP3.31□□□□□ -1.88
SGD1YLR336C IDI1P15496 288 aa3.3□□□□□ -1.88
SGD1YLR336C GCD6P32501 712 aaKnown RBP3.3□□□□□ -1.88
SGD1YLR336C VPS35P34110 944 aa3.3□□□□□ -1.88
SGD1YLR336C YHL008CP38750 627 aa3.3□□□□□ -1.88
SGD1YLR336C YDL176WQ12027 708 aa3.3□□□□□ -1.88
SGD1YLR336C MRP10O75012 95 aa3.3□□□□□ -1.88
SGD1YLR336C FLP1P03870 423 aa3.3□□□□□ -1.88
SGD1YLR336C PYC2P32327 1180 aaKnown RBP3.3□□□□□ -1.88
SGD1YLR336C ADE12P80210 433 aaKnown RBP3.3□□□□□ -1.88
SGD1YLR336C YBR287WP38355 427 aa3.29□□□□□ -1.88
SGD1YLR336C YER156CP40093 338 aaKnown RBP3.29□□□□□ -1.88
SGD1YLR336C FPS1P23900 669 aa3.29□□□□□ -1.88
SGD1YLR336C UGA4P32837 571 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms