RNA–Protein interactions for RNA: YLR320W

MMS22, Transcript of Subunit of E3 ubiquitin ligase complex involved in replication repair, yeast

Gene MMS22, Length 4,365 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MMS22	YLR320W	YDL129W	Q07555	291 aa		3.13	□□□□□ -1.91
MMS22	YLR320W	OXR1	Q08952	273 aa		3.13	□□□□□ -1.91
MMS22	YLR320W	IOC2	Q12072	812 aa		3.13	□□□□□ -1.91
MMS22	YLR320W	GAP1	P19145	602 aa	Predicted RBP	3.13	□□□□□ -1.91
MMS22	YLR320W	XKS1	P42826	600 aa		3.12	□□□□□ -1.91
MMS22	YLR320W	FOL1	P53848	824 aa		3.12	□□□□□ -1.91
MMS22	YLR320W	DNM1	P54861	757 aa		3.12	□□□□□ -1.91
MMS22	YLR320W	GAS4	Q08271	471 aa		3.12	□□□□□ -1.91
MMS22	YLR320W	MCM5	P29496	775 aa	Known RBP	3.12	□□□□□ -1.91
MMS22	YLR320W	HXT10	P43581	546 aa		3.12	□□□□□ -1.91
MMS22	YLR320W	NYV1	Q12255	253 aa		3.12	□□□□□ -1.91
MMS22	YLR320W	YNL035C	P53962	389 aa	Known RBP	3.12	□□□□□ -1.91
MMS22	YLR320W	SFP1	P32432	683 aa		3.12	□□□□□ -1.91
MMS22	YLR320W	SEC61	P32915	480 aa		3.12	□□□□□ -1.91
MMS22	YLR320W	XDJ1	P39102	459 aa		3.12	□□□□□ -1.91
MMS22	YLR320W	FIR1	P40020	876 aa		3.12	□□□□□ -1.91
MMS22	YLR320W	YPR097W	Q06839	1073 aa		3.12	□□□□□ -1.91
MMS22	YLR320W	FRA1	Q07825	749 aa		3.12	□□□□□ -1.91
MMS22	YLR320W	CRP1	P38845	465 aa	Known RBP	3.11	□□□□□ -1.91
MMS22	YLR320W	NIT1	P40447	199 aa		3.11	□□□□□ -1.91
MMS22	YLR320W	DAS1	P47005	663 aa		3.11	□□□□□ -1.91
MMS22	YLR320W	PHO8	P11491	566 aa		3.11	□□□□□ -1.91
MMS22	YLR320W	ASF1	P32447	279 aa		3.11	□□□□□ -1.91
MMS22	YLR320W	QDR2	P40474	542 aa		3.11	□□□□□ -1.91
MMS22	YLR320W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
MMS22	YLR320W	RPA14	P50106	137 aa		3.11	□□□□□ -1.91
MMS22	YLR320W	SEC23	P15303	768 aa	Known RBP	3.1	□□□□□ -1.91
MMS22	YLR320W	ERT1	P38140	529 aa		3.1	□□□□□ -1.91
MMS22	YLR320W	OCA5	P38738	679 aa		3.1	□□□□□ -1.91
MMS22	YLR320W	NUG1	P40010	520 aa	Known RBP	3.1	□□□□□ -1.91
MMS22	YLR320W	HLJ1	P48353	224 aa		3.1	□□□□□ -1.91
MMS22	YLR320W	ATG1	P53104	897 aa		3.1	□□□□□ -1.91
MMS22	YLR320W	VPS16	Q03308	798 aa		3.1	□□□□□ -1.91
MMS22	YLR320W	SPT5	P27692	1063 aa	Known RBP	3.1	□□□□□ -1.91
MMS22	YLR320W	TOM20	P35180	183 aa		3.1	□□□□□ -1.91
MMS22	YLR320W	YJL171C	P46992	396 aa		3.1	□□□□□ -1.91
MMS22	YLR320W	YNL165W	P53891	406 aa		3.1	□□□□□ -1.91
MMS22	YLR320W	TRS120	Q04183	1289 aa		3.1	□□□□□ -1.91
MMS22	YLR320W	SQT1	P35184	431 aa		3.1	□□□□□ -1.91
MMS22	YLR320W	ATG3	P40344	310 aa		3.1	□□□□□ -1.91
MMS22	YLR320W	ALR2	P43553	858 aa		3.1	□□□□□ -1.91
MMS22	YLR320W	CCP1	P00431	361 aa		3.09	□□□□□ -1.91
MMS22	YLR320W	DLD3	P39976	496 aa	Known RBP	3.09	□□□□□ -1.91
MMS22	YLR320W	RAD55	P38953	406 aa		3.09	□□□□□ -1.91
MMS22	YLR320W	OSH2	Q12451	1283 aa		3.09	□□□□□ -1.91
MMS22	YLR320W	MPD2	Q99316	277 aa		3.09	□□□□□ -1.91
MMS22	YLR320W	MLF3	P32047	452 aa		3.09	□□□□□ -1.91
MMS22	YLR320W	RRP15	Q06511	250 aa	Predicted RBP	3.09	□□□□□ -1.91
MMS22	YLR320W	YBR184W	P38299	523 aa		3.09	□□□□□ -1.92
MMS22	YLR320W	SRF1	Q12516	437 aa		3.09	□□□□□ -1.92
MMS22	YLR320W	MBP1	P39678	833 aa		3.08	□□□□□ -1.92
MMS22	YLR320W	PAN5	P38787	379 aa		3.08	□□□□□ -1.92
MMS22	YLR320W	YAF9	P53930	226 aa		3.08	□□□□□ -1.92
MMS22	YLR320W	YPR071W	Q12346	211 aa		3.08	□□□□□ -1.92
MMS22	YLR320W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
MMS22	YLR320W	SSF2	Q12153	453 aa	Predicted RBP	3.08	□□□□□ -1.92
MMS22	YLR320W	WTM2	Q12206	467 aa		3.08	□□□□□ -1.92
MMS22	YLR320W	SIS2	P36024	562 aa		3.07	□□□□□ -1.92
MMS22	YLR320W	CAB1	Q04430	367 aa		3.07	□□□□□ -1.92
MMS22	YLR320W	AIR1	P40507	360 aa	Known RBP	3.07	□□□□□ -1.92
MMS22	YLR320W	POB3	Q04636	552 aa	Known RBP	3.07	□□□□□ -1.92
MMS22	YLR320W	YPR084W	Q06821	456 aa		3.07	□□□□□ -1.92
MMS22	YLR320W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
MMS22	YLR320W	FKH1	P40466	484 aa		3.07	□□□□□ -1.92
MMS22	YLR320W	PHO4	P07270	312 aa	Known RBP	3.06	□□□□□ -1.92
MMS22	YLR320W	YTA6	P40328	754 aa		3.06	□□□□□ -1.92
MMS22	YLR320W	MRPS18	P42847	217 aa		3.06	□□□□□ -1.92
MMS22	YLR320W	CCC2	P38995	1004 aa		3.06	□□□□□ -1.92
MMS22	YLR320W	EAF1	Q06337	982 aa		3.06	□□□□□ -1.92
MMS22	YLR320W	UGA3	P26370	528 aa		3.06	□□□□□ -1.92
MMS22	YLR320W	NSE3	Q05541	303 aa		3.06	□□□□□ -1.92
MMS22	YLR320W	HIM1	Q06674	414 aa		3.06	□□□□□ -1.92
MMS22	YLR320W	RAD18	P10862	487 aa		3.05	□□□□□ -1.92
MMS22	YLR320W	CLN2	P20438	545 aa		3.05	□□□□□ -1.92
MMS22	YLR320W	LDH1	P38139	375 aa		3.05	□□□□□ -1.92
MMS22	YLR320W	PPH3	P32345	308 aa		3.05	□□□□□ -1.92
MMS22	YLR320W	SAH1	P39954	449 aa	Known RBP	3.05	□□□□□ -1.92
MMS22	YLR320W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected
MMS22	YLR320W	SND1	Q04007	877 aa		3.05	□□□□□ -1.92
MMS22	YLR320W	GCR1	P07261	785 aa		3.05	□□□□□ -1.92
MMS22	YLR320W	PER1	P25625	357 aa		3.05	□□□□□ -1.92
MMS22	YLR320W	OPI10	Q08202	246 aa		3.05	□□□□□ -1.92
MMS22	YLR320W	RAD2	P07276	1031 aa		3.05	□□□□□ -1.92
MMS22	YLR320W	TOM70	P07213	617 aa	Known RBP	3.04	□□□□□ -1.92
MMS22	YLR320W	ATG14	P38270	344 aa		3.04	□□□□□ -1.92
MMS22	YLR320W	YJR115W	P47152	169 aa		3.04	□□□□□ -1.92
MMS22	YLR320W	URN1	Q06525	465 aa	Known RBP	3.04	□□□□□ -1.92
MMS22	YLR320W	FLC1	Q08967	793 aa		3.04	□□□□□ -1.92
MMS22	YLR320W	CYC8	P14922	966 aa		3.04	□□□□□ -1.92
MMS22	YLR320W	VMA3	P25515	160 aa		3.04	□□□□□ -1.92
MMS22	YLR320W	YDR306C	Q06640	478 aa		3.04	□□□□□ -1.92
MMS22	YLR320W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.04	□□□□□ -1.92	not detected
MMS22	YLR320W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.04	□□□□□ -1.92	not detected
MMS22	YLR320W	PRP40	P33203	583 aa	Known RBP	3.04	□□□□□ -1.92
MMS22	YLR320W	RTF1	P53064	558 aa		3.04	□□□□□ -1.92
MMS22	YLR320W	TFC4	P33339	1025 aa		3.03	□□□□□ -1.92
MMS22	YLR320W	TFB2	Q02939	513 aa		3.03	□□□□□ -1.92
MMS22	YLR320W	HVG1	P0CE11	249 aa		3.03	□□□□□ -1.92
MMS22	YLR320W	SIS1	P25294	352 aa	Known RBP	3.03	□□□□□ -1.92
MMS22	YLR320W	DAL3	P32459	195 aa		3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms