RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C APC11Q12157 165 aa6.9□□□□□ -1.3
SMD3YLR147C DPH6Q12429 685 aa6.9□□□□□ -1.3
SMD3YLR147C NAB2P32505 525 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
SMD3YLR147C CUS1Q02554 436 aaPredicted RBP6.89□□□□□ -1.31
SMD3YLR147C TRK2P28584 889 aa6.88□□□□□ -1.31
SMD3YLR147C KTR2P33550 425 aa6.88□□□□□ -1.31
SMD3YLR147C MSC7P38694 644 aa6.88□□□□□ -1.31
SMD3YLR147C KAR5Q04746 504 aa6.88□□□□□ -1.31
SMD3YLR147C FUR4P05316 633 aaKnown RBP6.87□□□□□ -1.31
SMD3YLR147C FPS1P23900 669 aa6.87□□□□□ -1.31
SMD3YLR147C LDH1P38139 375 aa6.87□□□□□ -1.31
SMD3YLR147C DYS1P38791 387 aa6.87□□□□□ -1.31
SMD3YLR147C YNR040WP53736 256 aa6.87□□□□□ -1.31
SMD3YLR147C TY1A-DR2Q03964 440 aaKnown RBP6.86□□□□□ -1.31
SMD3YLR147C TRL1P09880 827 aaKnown RBP6.84□□□□□ -1.31
SMD3YLR147C RPB10P22139 70 aa6.84□□□□□ -1.31
SMD3YLR147C BSD2P38356 321 aa6.84□□□□□ -1.31
SMD3YLR147C APM2P38700 605 aa6.84□□□□□ -1.31
SMD3YLR147C ITC1P53125 1264 aa6.84□□□□□ -1.31
SMD3YLR147C YOR296WQ08748 1289 aa6.84□□□□□ -1.31
SMD3YLR147C HAT1Q12341 374 aa6.84□□□□□ -1.31
SMD3YLR147C RPP1AP05318 106 aaPredicted RBP6.83□□□□□ -1.32
SMD3YLR147C MSN1P22148 382 aa6.83□□□□□ -1.32
SMD3YLR147C HXT8P40886 569 aa6.83□□□□□ -1.32
SMD3YLR147C ATG1P53104 897 aa6.83□□□□□ -1.32
SMD3YLR147C NCL1P38205 684 aaKnown RBP6.82□□□□□ -1.32
SMD3YLR147C GIP1P38229 639 aa6.82□□□□□ -1.32
SMD3YLR147C GLO3P38682 493 aaKnown RBP6.82□□□□□ -1.32
SMD3YLR147C QDR1P40475 563 aa6.82□□□□□ -1.32
SMD3YLR147C SUT1P53032 299 aaKnown RBP6.82□□□□□ -1.32
SMD3YLR147C HEH2Q03281 663 aa6.82□□□□□ -1.32
SMD3YLR147C ERP5P38819 212 aa6.81□□□□□ -1.32
SMD3YLR147C GPM1P00950 247 aaKnown RBP6.8□□□□□ -1.32
SMD3YLR147C ISW1P38144 1129 aa6.8□□□□□ -1.32
SMD3YLR147C YBL113CQ7M4S9 792 aa6.8□□□□□ -1.32
SMD3YLR147C PRK1P40494 810 aa6.79□□□□□ -1.32
SMD3YLR147C MDJ2P42834 146 aa6.79□□□□□ -1.32
SMD3YLR147C RGD2P43556 714 aa6.79□□□□□ -1.32
SMD3YLR147C ACF4P47129 309 aa6.79□□□□□ -1.32
SMD3YLR147C PDC5P16467 563 aaKnown RBP6.77□□□□□ -1.33
SMD3YLR147C YER156CP40093 338 aaKnown RBP6.77□□□□□ -1.33
SMD3YLR147C NTA1P40354 457 aa6.77□□□□□ -1.33
SMD3YLR147C YIL165CP40446 119 aa6.77□□□□□ -1.33
SMD3YLR147C IDI1P15496 288 aa6.76□□□□□ -1.33
SMD3YLR147C KNS1P32350 737 aaPredicted RBP6.76□□□□□ -1.33
SMD3YLR147C GRS1P38088 690 aaKnown RBP6.76□□□□□ -1.33
SMD3YLR147C FIR1P40020 876 aa6.76□□□□□ -1.33
SMD3YLR147C EMG1Q06287 252 aaKnown RBP6.76□□□□□ -1.33
SMD3YLR147C SMC1P32908 1225 aa6.75□□□□□ -1.33
SMD3YLR147C SSF1P38789 453 aaPredicted RBP6.75□□□□□ -1.33
SMD3YLR147C YFL066CP43538 392 aa6.75□□□□□ -1.33
SMD3YLR147C MRP10O75012 95 aa6.74□□□□□ -1.33
SMD3YLR147C RAD55P38953 406 aa6.74□□□□□ -1.33
SMD3YLR147C TIF6Q12522 245 aaKnown RBP6.74□□□□□ -1.33
SMD3YLR147C AI1P03875 834 aa6.73□□□□□ -1.33
SMD3YLR147C TRS120Q04183 1289 aa6.73□□□□□ -1.33
SMD3YLR147C MNL2Q12205 849 aa6.73□□□□□ -1.33
SMD3YLR147C MDJ1P35191 511 aa6.72□□□□□ -1.33
SMD3YLR147C IRS4P36115 615 aaKnown RBP6.72□□□□□ -1.33
SMD3YLR147C YBR287WP38355 427 aa6.72□□□□□ -1.33
SMD3YLR147C AIM46P38885 310 aa6.72□□□□□ -1.33
SMD3YLR147C UFD2P54860 961 aa6.72□□□□□ -1.33
SMD3YLR147C FRT1Q99332 602 aa6.72□□□□□ -1.33
SMD3YLR147C PSY2P40164 858 aa6.71□□□□□ -1.34
SMD3YLR147C SBE2P42223 864 aaKnown RBP6.71□□□□□ -1.34
SMD3YLR147C NUT2Q06213 157 aa6.71□□□□□ -1.34
SMD3YLR147C THI72Q08579 599 aa6.71□□□□□ -1.34
SMD3YLR147C PPT1P53043 513 aa6.7□□□□□ -1.34
SMD3YLR147C RSC4Q02206 625 aa6.7□□□□□ -1.34
SMD3YLR147C RSC2Q06488 889 aa6.68□□□□□ -1.34
SMD3YLR147C GPI13Q07830 1017 aa6.68□□□□□ -1.34
SMD3YLR147C NAR1P23503 491 aaKnown RBP6.67□□□□□ -1.34
SMD3YLR147C YHL050CP38721 697 aa6.67□□□□□ -1.34
SMD3YLR147C YHR219WP38900 624 aa6.67□□□□□ -1.34
SMD3YLR147C NSG2P53898 299 aa6.67□□□□□ -1.34
SMD3YLR147C YNL011CP53980 444 aa6.67□□□□□ -1.34
SMD3YLR147C GIS4Q04233 774 aa6.67□□□□□ -1.34
SMD3YLR147C RGA2Q06407 1009 aa6.67□□□□□ -1.34
SMD3YLR147C ICP55P40051 511 aa6.66□□□□□ -1.34
SMD3YLR147C YJL181WP46987 611 aa6.66□□□□□ -1.34
SMD3YLR147C CTR9P89105 1077 aa6.66□□□□□ -1.34
SMD3YLR147C PGM2P37012 569 aaKnown RBP6.65□□□□□ -1.34
SMD3YLR147C STM1P39015 273 aaKnown RBP6.65□□□□□ -1.34
SMD3YLR147C BOI2P39969 1040 aa6.65□□□□□ -1.34
SMD3YLR147C INP51P40559 946 aaKnown RBP6.65□□□□□ -1.34
SMD3YLR147C YML020WQ03722 664 aa6.65□□□□□ -1.34
SMD3YLR147C PYC2P32327 1180 aaKnown RBP6.64□□□□□ -1.35
SMD3YLR147C MET1P36150 593 aa6.64□□□□□ -1.35
SMD3YLR147C ALG14P38242 237 aa6.64□□□□□ -1.35
SMD3YLR147C MCX1P38323 520 aaPredicted RBP6.64□□□□□ -1.35
SMD3YLR147C YNR014WP53719 212 aa6.64□□□□□ -1.35
SMD3YLR147C BIO5P53744 561 aaKnown RBP6.64□□□□□ -1.35
SMD3YLR147C ALD3P54114 506 aa6.64□□□□□ -1.35
SMD3YLR147C TDA6Q06466 467 aa6.64□□□□□ -1.35
SMD3YLR147C MSC6Q08818 692 aaKnown RBP6.64□□□□□ -1.35
SMD3YLR147C PHM7Q12252 991 aa6.64□□□□□ -1.35
SMD3YLR147C TFA2P36145 328 aa6.63□□□□□ -1.35
SMD3YLR147C CDC55Q00362 526 aa6.63□□□□□ -1.35
SMD3YLR147C SEN54Q02825 467 aaPredicted RBP6.63□□□□□ -1.35
SMD3YLR147C NOP8Q08287 484 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 80.4 ms