RNA–Protein interactions for RNA: YLR114C

AVL9, Transcript of Conserved protein involved in exocytic transport from the Golgi, yeastyeast

Gene AVL9, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVL9YLR114C CIC1P38779 376 aaKnown RBP8.71□□□□□ -1.02
AVL9YLR114C RPN7Q06103 429 aaKnown RBP8.71□□□□□ -1.02
AVL9YLR114C ESC2Q06340 456 aa8.71□□□□□ -1.02
AVL9YLR114C SAC3P46674 1301 aa8.7□□□□□ -1.02
AVL9YLR114C MAL33P38157 468 aa8.7□□□□□ -1.02
AVL9YLR114C ENT3P47160 408 aa8.7□□□□□ -1.02
AVL9YLR114C SNU66Q12420 587 aaPredicted RBP8.7□□□□□ -1.02
AVL9YLR114C COBP00163 385 aa8.7□□□□□ -1.02
AVL9YLR114C MATALPHA2P0CY08 210 aa8.7□□□□□ -1.02
AVL9YLR114C HMLALPHA2P0CY09 210 aa8.7□□□□□ -1.02
AVL9YLR114C SSL2Q00578 843 aa8.7□□□□□ -1.02
AVL9YLR114C PGA3Q12746 312 aaKnown RBP8.7□□□□□ -1.02
AVL9YLR114C TRS33Q99394 268 aa8.7□□□□□ -1.02
AVL9YLR114C YGL082WP53155 381 aa8.69□□□□□ -1.02
AVL9YLR114C CYC8P14922 966 aa8.69□□□□□ -1.02
AVL9YLR114C ATE1P16639 503 aa8.69□□□□□ -1.02
AVL9YLR114C FBP26P32604 452 aa8.69□□□□□ -1.02
AVL9YLR114C BBC1P47068 1157 aa8.69□□□□□ -1.02
AVL9YLR114C YNL193WP53870 558 aa8.69□□□□□ -1.02
AVL9YLR114C APP1P53933 587 aa8.69□□□□□ -1.02
AVL9YLR114C YKE2P52553 114 aa8.68□□□□□ -1.02
AVL9YLR114C ECM23Q02710 187 aa8.68□□□□□ -1.02
AVL9YLR114C PKH3Q03306 898 aaPredicted RBP8.68□□□□□ -1.02
AVL9YLR114C YLR407WQ06070 228 aa8.68□□□□□ -1.02
AVL9YLR114C PEP3P27801 918 aa8.68□□□□□ -1.02
AVL9YLR114C ADR1P07248 1323 aa8.67□□□□□ -1.02
AVL9YLR114C DOT5P40553 215 aa8.67□□□□□ -1.02
AVL9YLR114C STU2P46675 888 aa8.67□□□□□ -1.02
AVL9YLR114C FOX2Q02207 900 aaKnown RBP8.67□□□□□ -1.02
AVL9YLR114C TIM50Q02776 476 aa8.67□□□□□ -1.02
AVL9YLR114C IMH1Q06704 911 aaKnown RBP8.67□□□□□ -1.02
AVL9YLR114C LAM4P38800 1345 aa8.67□□□□□ -1.02
AVL9YLR114C SER1P33330 395 aaKnown RBP8.66□□□□□ -1.02
AVL9YLR114C YKR075CP36155 307 aa8.66□□□□□ -1.02
AVL9YLR114C RFC5P38251 354 aa8.66□□□□□ -1.02
AVL9YLR114C YAH1Q12184 172 aaKnown RBP8.66□□□□□ -1.02
AVL9YLR114C RIM15P43565 1770 aa8.66□□□□□ -1.02
AVL9YLR114C UTP10P42945 1769 aaKnown RBP8.66□□□□□ -1.02
AVL9YLR114C LEO1P38439 464 aa8.66□□□□□ -1.02
AVL9YLR114C TPM2P40414 161 aa8.66□□□□□ -1.02
AVL9YLR114C GPA1P08539 472 aa8.65□□□□□ -1.02
AVL9YLR114C SGD1Q06132 899 aa8.65□□□□□ -1.02
AVL9YLR114C YER130CP39959 443 aa8.65□□□□□ -1.03
AVL9YLR114C BUD6P41697 788 aa8.65□□□□□ -1.03
AVL9YLR114C ESF1Q06344 628 aaKnown RBP8.65□□□□□ -1.03
AVL9YLR114C SES1P07284 462 aaKnown RBP8.64□□□□□ -1.03
AVL9YLR114C IMP2'P32351 346 aa8.64□□□□□ -1.03
AVL9YLR114C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
AVL9YLR114C YMR147WP40218 223 aaKnown RBP8.64□□□□□ -1.03
AVL9YLR114C RFT1P38206 574 aaPredicted RBP8.64□□□□□ -1.03
AVL9YLR114C HAL5P38970 855 aaKnown RBP8.64□□□□□ -1.03
AVL9YLR114C YPT11P48559 417 aa8.64□□□□□ -1.03
AVL9YLR114C HOS3Q02959 697 aaKnown RBP8.64□□□□□ -1.03
AVL9YLR114C PGI1P12709 554 aaKnown RBP8.63□□□□□ -1.03
AVL9YLR114C RRM3P38766 723 aa8.63□□□□□ -1.03
AVL9YLR114C SSF2Q12153 453 aaPredicted RBP8.63□□□□□ -1.03
AVL9YLR114C NYV1Q12255 253 aa8.63□□□□□ -1.03
AVL9YLR114C MET1P36150 593 aa8.63□□□□□ -1.03
AVL9YLR114C PIF1P07271 859 aa8.62□□□□□ -1.03
AVL9YLR114C UBP10P53874 792 aaPredicted RBP8.62□□□□□ -1.03
AVL9YLR114C TAH18Q12181 623 aa8.62□□□□□ -1.03
AVL9YLR114C HAT1Q12341 374 aa8.62□□□□□ -1.03
AVL9YLR114C GLO3P38682 493 aaKnown RBP8.61□□□□□ -1.03
AVL9YLR114C RPN1P38764 993 aaKnown RBP8.61□□□□□ -1.03
AVL9YLR114C CRG1P38892 291 aaRIP-Chip data8.61□□□□□ -1.03not detected
AVL9YLR114C KAR5Q04746 504 aa8.61□□□□□ -1.03
AVL9YLR114C RRI2Q12348 645 aa8.61□□□□□ -1.03
AVL9YLR114C POM152P39685 1337 aa8.61□□□□□ -1.03
AVL9YLR114C ALD3P54114 506 aa8.61□□□□□ -1.03
AVL9YLR114C GSY2P27472 705 aa8.6□□□□□ -1.03
AVL9YLR114C FYV10P40492 516 aa8.6□□□□□ -1.03
AVL9YLR114C SIS2P36024 562 aa8.6□□□□□ -1.03
AVL9YLR114C VMS1Q04311 632 aaKnown RBP8.6□□□□□ -1.03
AVL9YLR114C SPN1Q06505 410 aaPredicted RBP8.6□□□□□ -1.03
AVL9YLR114C MPH3P0CE00 602 aa8.59□□□□□ -1.03
AVL9YLR114C CBP3P21560 335 aa8.59□□□□□ -1.03
AVL9YLR114C MNR2P35724 969 aa8.59□□□□□ -1.03
AVL9YLR114C TFG2P41896 400 aaPredicted RBP8.59□□□□□ -1.03
AVL9YLR114C EPL1P43572 832 aa8.59□□□□□ -1.03
AVL9YLR114C MSB4Q12317 492 aa8.59□□□□□ -1.03
AVL9YLR114C SRP40P32583 406 aaPredicted RBP8.59□□□□□ -1.03
AVL9YLR114C MFT1P33441 392 aaKnown RBP8.59□□□□□ -1.03
AVL9YLR114C RER2P35196 286 aa8.59□□□□□ -1.03
AVL9YLR114C YKT6P36015 200 aaKnown RBP8.59□□□□□ -1.03
AVL9YLR114C WAR1Q03631 944 aa8.59□□□□□ -1.03
AVL9YLR114C EST2Q06163 884 aa8.59□□□□□ -1.03
AVL9YLR114C LAM6Q08001 693 aa8.59□□□□□ -1.03
AVL9YLR114C GRE2Q12068 342 aaKnown RBP8.59□□□□□ -1.03
AVL9YLR114C HSP82P02829 709 aaKnown RBP8.58□□□□□ -1.04
AVL9YLR114C ENP2P48234 707 aaKnown RBP8.58□□□□□ -1.04
AVL9YLR114C PPM2Q08282 695 aa8.58□□□□□ -1.04
AVL9YLR114C DIT2P21595 489 aa8.57□□□□□ -1.04
AVL9YLR114C TCD1P38756 429 aa8.57□□□□□ -1.04
AVL9YLR114C MCM4P30665 933 aaKnown RBP8.57□□□□□ -1.04
AVL9YLR114C CEP3P40969 608 aa8.57□□□□□ -1.04
AVL9YLR114C IRC8P47046 822 aa8.57□□□□□ -1.04
AVL9YLR114C PFK2P16862 959 aaKnown RBP RIP-Chip data8.56□□□□□ -1.04not detected
AVL9YLR114C NPL4P33755 580 aa8.56□□□□□ -1.04
AVL9YLR114C TFC8Q12308 588 aa8.56□□□□□ -1.04
AVL9YLR114C RPL22AP05749 121 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms