RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C QCR6P00127 147 aa12.89□□□□□ -0.35
SPT8YLR055C FRD1P32614 470 aaKnown RBP12.89□□□□□ -0.35
SPT8YLR055C RPN1P38764 993 aaKnown RBP12.89□□□□□ -0.35
SPT8YLR055C UBP16Q02863 499 aa12.89□□□□□ -0.35
SPT8YLR055C SUP35P05453 685 aaKnown RBP12.88□□□□□ -0.35
SPT8YLR055C SIT4P20604 311 aa12.88□□□□□ -0.35
SPT8YLR055C MTC5Q03897 1148 aa12.88□□□□□ -0.35
SPT8YLR055C SAS4Q04003 481 aa12.88□□□□□ -0.35
SPT8YLR055C SSA1P10591 642 aaKnown RBP12.88□□□□□ -0.35
SPT8YLR055C HXT10P43581 546 aa12.88□□□□□ -0.35
SPT8YLR055C APC11Q12157 165 aa12.88□□□□□ -0.35
SPT8YLR055C SAC3P46674 1301 aa12.87□□□□□ -0.35
SPT8YLR055C HGH1P48362 394 aaKnown RBP12.85□□□□□ -0.35
SPT8YLR055C DID4P36108 232 aa12.85□□□□□ -0.35
SPT8YLR055C TPM2P40414 161 aa12.85□□□□□ -0.35
SPT8YLR055C SNU66Q12420 587 aaPredicted RBP12.84□□□□□ -0.35
SPT8YLR055C KRI1P42846 591 aaKnown RBP12.83□□□□□ -0.35
SPT8YLR055C DPH6Q12429 685 aa12.83□□□□□ -0.35
SPT8YLR055C FPR4Q06205 392 aaPredicted RBP12.82□□□□□ -0.36
SPT8YLR055C PEX19Q07418 342 aa12.82□□□□□ -0.36
SPT8YLR055C NGR1P32831 672 aaKnown RBP12.81□□□□□ -0.36
SPT8YLR055C ICL1P28240 557 aaPredicted RBP12.81□□□□□ -0.36
SPT8YLR055C ICP55P40051 511 aa12.81□□□□□ -0.36
SPT8YLR055C RMD1Q03441 430 aa12.81□□□□□ -0.36
SPT8YLR055C MRPL10P36520 322 aa12.8□□□□□ -0.36
SPT8YLR055C THI3Q07471 609 aa12.8□□□□□ -0.36
SPT8YLR055C GRX6Q12438 231 aa12.8□□□□□ -0.36
SPT8YLR055C TOP1P04786 769 aa12.79□□□□□ -0.36
SPT8YLR055C RPL19AP0CX82 189 aaKnown RBP12.79□□□□□ -0.36
SPT8YLR055C RPL19BP0CX83 189 aaPredicted RBP12.79□□□□□ -0.36
SPT8YLR055C SSF1P38789 453 aaPredicted RBP12.79□□□□□ -0.36
SPT8YLR055C MGM1P32266 881 aa12.78□□□□□ -0.36
SPT8YLR055C SLA1P32790 1244 aa12.78□□□□□ -0.36
SPT8YLR055C YKU70P32807 602 aa12.78□□□□□ -0.36
SPT8YLR055C RIM20Q12033 661 aa12.78□□□□□ -0.36
SPT8YLR055C CYC8P14922 966 aa12.78□□□□□ -0.36
SPT8YLR055C AAP1P37898 856 aaKnown RBP12.78□□□□□ -0.36
SPT8YLR055C HOS3Q02959 697 aaKnown RBP12.78□□□□□ -0.36
SPT8YLR055C ECM21P38167 1117 aaKnown RBP12.77□□□□□ -0.37
SPT8YLR055C SQS1P53866 767 aaKnown RBP12.77□□□□□ -0.37
SPT8YLR055C SRC1Q03707 834 aa12.77□□□□□ -0.37
SPT8YLR055C NCB2Q92317 146 aa12.77□□□□□ -0.37
SPT8YLR055C RET1P22276 1149 aaKnown RBP12.76□□□□□ -0.37
SPT8YLR055C MPE1P35728 441 aaKnown RBP12.76□□□□□ -0.37
SPT8YLR055C SIS2P36024 562 aa12.76□□□□□ -0.37
SPT8YLR055C CCT5P40413 562 aaKnown RBP12.76□□□□□ -0.37
SPT8YLR055C STU2P46675 888 aa12.76□□□□□ -0.37
SPT8YLR055C PDR18P53756 1333 aa12.76□□□□□ -0.37
SPT8YLR055C HKR1P41809 1802 aa12.76□□□□□ -0.37
SPT8YLR055C KRE2P27809 442 aa12.76□□□□□ -0.37
SPT8YLR055C ELM1P32801 640 aa12.76□□□□□ -0.37
SPT8YLR055C AIM9P40053 627 aaKnown RBP12.76□□□□□ -0.37
SPT8YLR055C RPT4P53549 437 aaKnown RBP12.76□□□□□ -0.37
SPT8YLR055C TAF13P11747 167 aa12.75□□□□□ -0.37
SPT8YLR055C PEX14P53112 341 aa12.75□□□□□ -0.37
SPT8YLR055C GYP5Q12344 894 aa12.75□□□□□ -0.37
SPT8YLR055C PRX1P34227 261 aaKnown RBP12.74□□□□□ -0.37
SPT8YLR055C SPL2P38839 148 aa12.74□□□□□ -0.37
SPT8YLR055C SSL2Q00578 843 aa12.74□□□□□ -0.37
SPT8YLR055C TIM50Q02776 476 aa12.74□□□□□ -0.37
SPT8YLR055C ADR1P07248 1323 aa12.74□□□□□ -0.37
SPT8YLR055C BRE1Q07457 700 aaKnown RBP12.74□□□□□ -0.37
SPT8YLR055C SEC18P18759 758 aaKnown RBP12.73□□□□□ -0.37
SPT8YLR055C MBR1P23493 339 aa12.73□□□□□ -0.37
SPT8YLR055C ETT1Q08421 412 aaKnown RBP12.73□□□□□ -0.37
SPT8YLR055C FRS2P15625 503 aaKnown RBP12.72□□□□□ -0.37
SPT8YLR055C PBY1P38254 753 aa12.72□□□□□ -0.37
SPT8YLR055C NPR3P38742 1146 aa12.72□□□□□ -0.37
SPT8YLR055C SHC1P39000 512 aa12.72□□□□□ -0.37
SPT8YLR055C MRPS35P53292 345 aa12.72□□□□□ -0.37
SPT8YLR055C TCD1P38756 429 aa12.72□□□□□ -0.37
SPT8YLR055C SET4P42948 560 aa12.72□□□□□ -0.37
SPT8YLR055C UBX2Q04228 584 aa12.72□□□□□ -0.37
SPT8YLR055C TSR3Q12094 313 aaKnown RBP12.72□□□□□ -0.37
SPT8YLR055C FAS2P19097 1887 aaKnown RBP12.71□□□□□ -0.37
SPT8YLR055C CTF18P49956 741 aa12.71□□□□□ -0.38
SPT8YLR055C POM152P39685 1337 aa12.71□□□□□ -0.38
SPT8YLR055C AI2P03876 854 aa12.7□□□□□ -0.38
SPT8YLR055C RPS9BP05755 195 aaKnown RBP12.7□□□□□ -0.38
SPT8YLR055C SES1P07284 462 aaKnown RBP12.7□□□□□ -0.38
SPT8YLR055C MFT1P33441 392 aaKnown RBP12.7□□□□□ -0.38
SPT8YLR055C TRS33Q99394 268 aa12.7□□□□□ -0.38
SPT8YLR055C TIF4632P39936 914 aaKnown RBP12.69□□□□□ -0.38
SPT8YLR055C NUG1P40010 520 aaKnown RBP12.69□□□□□ -0.38
SPT8YLR055C DPL1Q05567 589 aa12.69□□□□□ -0.38
SPT8YLR055C TTI1P36097 1038 aa12.69□□□□□ -0.38
SPT8YLR055C MLC1P53141 149 aa12.69□□□□□ -0.38
SPT8YLR055C FPK1P53739 893 aa12.69□□□□□ -0.38
SPT8YLR055C IRC4Q03036 179 aa12.69□□□□□ -0.38
SPT8YLR055C DIP2Q12220 943 aaPredicted RBP12.69□□□□□ -0.38
SPT8YLR055C RRI2Q12348 645 aa12.69□□□□□ -0.38
SPT8YLR055C ATE1P16639 503 aa12.68□□□□□ -0.38
SPT8YLR055C YNL193WP53870 558 aa12.68□□□□□ -0.38
SPT8YLR055C ATG20Q07528 640 aa12.68□□□□□ -0.38
SPT8YLR055C FIG2P25653 1609 aa12.67□□□□□ -0.38
SPT8YLR055C SPO22P40511 975 aa12.67□□□□□ -0.38
SPT8YLR055C YGL242CP53066 181 aa12.67□□□□□ -0.38
SPT8YLR055C RPN7Q06103 429 aaKnown RBP12.67□□□□□ -0.38
SPT8YLR055C SFI1Q12369 946 aa12.67□□□□□ -0.38
SPT8YLR055C TPM1P17536 199 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms