RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C SLN1P39928 1220 aaPredicted RBP7.73□□□□□ -1.17
RPF2YKR081C TAF7Q05021 590 aa7.73□□□□□ -1.17
RPF2YKR081C KAP122P32767 1081 aa7.72□□□□□ -1.17
RPF2YKR081C NGR1P32831 672 aaKnown RBP7.72□□□□□ -1.17
RPF2YKR081C SCD5P34758 872 aa7.72□□□□□ -1.17
RPF2YKR081C NCL1P38205 684 aaKnown RBP7.72□□□□□ -1.17
RPF2YKR081C NRD1P53617 575 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
RPF2YKR081C TRS33Q99394 268 aa7.72□□□□□ -1.17
RPF2YKR081C CWH41P53008 833 aa7.71□□□□□ -1.18
RPF2YKR081C YML083CQ04526 418 aa7.71□□□□□ -1.18
RPF2YKR081C UTP4Q06679 776 aaKnown RBP7.71□□□□□ -1.18
RPF2YKR081C YDR215CQ12240 137 aa7.71□□□□□ -1.18
RPF2YKR081C PUF6Q04373 656 aaKnown RBP7.7□□□□□ -1.18
RPF2YKR081C CUS1Q02554 436 aaPredicted RBP7.69□□□□□ -1.18
RPF2YKR081C MCA1Q08601 432 aa7.69□□□□□ -1.18
RPF2YKR081C NHA1Q99271 985 aa7.69□□□□□ -1.18
RPF2YKR081C ALG14P38242 237 aa7.68□□□□□ -1.18
RPF2YKR081C PGM2P37012 569 aaKnown RBP7.67□□□□□ -1.18
RPF2YKR081C APM2P38700 605 aa7.67□□□□□ -1.18
RPF2YKR081C LSB6P42951 607 aa7.67□□□□□ -1.18
RPF2YKR081C PRY1P47032 299 aa7.67□□□□□ -1.18
RPF2YKR081C SKP1P52286 194 aa7.67□□□□□ -1.18
RPF2YKR081C HXT5P38695 592 aa7.66□□□□□ -1.18
RPF2YKR081C AMN1P38285 549 aaPredicted RBP7.65□□□□□ -1.18
RPF2YKR081C PRK1P40494 810 aa7.65□□□□□ -1.18
RPF2YKR081C SUV3P32580 737 aa7.64□□□□□ -1.19
RPF2YKR081C QDR2P40474 542 aa7.64□□□□□ -1.19
RPF2YKR081C TPS3P38426 1054 aaKnown RBP7.63□□□□□ -1.19
RPF2YKR081C CWC15Q03772 175 aaKnown RBP7.63□□□□□ -1.19
RPF2YKR081C PUN1Q06991 263 aa7.63□□□□□ -1.19
RPF2YKR081C NAB2P32505 525 aaKnown RBP RIP-Chip data7.62□□□□□ -1.19not detected
RPF2YKR081C ALD4P46367 519 aaKnown RBP7.62□□□□□ -1.19
RPF2YKR081C YNR040WP53736 256 aa7.62□□□□□ -1.19
RPF2YKR081C SRS2P12954 1174 aa7.61□□□□□ -1.19
RPF2YKR081C CAB1Q04430 367 aa7.61□□□□□ -1.19
RPF2YKR081C SSA1P10591 642 aaKnown RBP7.6□□□□□ -1.19
RPF2YKR081C FOX2Q02207 900 aaKnown RBP7.6□□□□□ -1.19
RPF2YKR081C RPC31P17890 251 aa7.59□□□□□ -1.19
RPF2YKR081C RPL34AP87262 121 aaPredicted RBP7.59□□□□□ -1.19
RPF2YKR081C NAR1P23503 491 aaKnown RBP7.58□□□□□ -1.2
RPF2YKR081C YBR197CP38306 217 aa7.58□□□□□ -1.2
RPF2YKR081C YPL034WQ03083 165 aa7.58□□□□□ -1.2
RPF2YKR081C BUD9P53226 547 aa7.57□□□□□ -1.2
RPF2YKR081C GIS4Q04233 774 aa7.57□□□□□ -1.2
RPF2YKR081C GLT1Q12680 2145 aaKnown RBP7.57□□□□□ -1.2
RPF2YKR081C MRPL33P20084 86 aa7.56□□□□□ -1.2
RPF2YKR081C PNP1Q05788 311 aa7.56□□□□□ -1.2
RPF2YKR081C VMA3P25515 160 aa7.55□□□□□ -1.2
RPF2YKR081C DYS1P38791 387 aa7.55□□□□□ -1.2
RPF2YKR081C ISC10P32645 267 aa7.54□□□□□ -1.2
RPF2YKR081C MAC1P35192 417 aa7.53□□□□□ -1.2
RPF2YKR081C LDH1P38139 375 aa7.53□□□□□ -1.2
RPF2YKR081C RRM3P38766 723 aa7.53□□□□□ -1.2
RPF2YKR081C ITC1P53125 1264 aa7.53□□□□□ -1.2
RPF2YKR081C RRN6P32786 894 aa7.52□□□□□ -1.21
RPF2YKR081C IDI1P15496 288 aa7.51□□□□□ -1.21
RPF2YKR081C GEF1P37020 779 aa7.51□□□□□ -1.21
RPF2YKR081C GIP1P38229 639 aa7.51□□□□□ -1.21
RPF2YKR081C GAS5Q08193 484 aa7.51□□□□□ -1.21
RPF2YKR081C YOR296WQ08748 1289 aa7.51□□□□□ -1.21
RPF2YKR081C MRP10O75012 95 aa7.5□□□□□ -1.21
RPF2YKR081C ALO1P54783 526 aaKnown RBP7.5□□□□□ -1.21
RPF2YKR081C SAC7P17121 654 aa7.49□□□□□ -1.21
RPF2YKR081C FUR4P05316 633 aaKnown RBP7.48□□□□□ -1.21
RPF2YKR081C BSD2P38356 321 aa7.48□□□□□ -1.21
RPF2YKR081C AI3P03877 415 aa7.47□□□□□ -1.21
RPF2YKR081C ISW1P38144 1129 aa7.47□□□□□ -1.21
RPF2YKR081C YER156CP40093 338 aaKnown RBP7.47□□□□□ -1.21
RPF2YKR081C YJL181WP46987 611 aa7.47□□□□□ -1.21
RPF2YKR081C RSC2Q06488 889 aa7.47□□□□□ -1.21
RPF2YKR081C LSO1Q3E827 93 aa7.47□□□□□ -1.21
RPF2YKR081C BOL3P39724 118 aa7.46□□□□□ -1.22
RPF2YKR081C SLP1Q12232 587 aa7.46□□□□□ -1.22
RPF2YKR081C CDC3P32457 520 aaKnown RBP7.45□□□□□ -1.22
RPF2YKR081C FIR1P40020 876 aa7.45□□□□□ -1.22
RPF2YKR081C KAR5Q04746 504 aa7.45□□□□□ -1.22
RPF2YKR081C APC11Q12157 165 aa7.45□□□□□ -1.22
RPF2YKR081C OMA1P36163 345 aa7.44□□□□□ -1.22
RPF2YKR081C YBR287WP38355 427 aa7.44□□□□□ -1.22
RPF2YKR081C ARI1P53111 347 aaKnown RBP7.44□□□□□ -1.22
RPF2YKR081C SOK2P53438 785 aaPredicted RBP7.44□□□□□ -1.22
RPF2YKR081C COQ2P32378 372 aa7.43□□□□□ -1.22
RPF2YKR081C SFA1P32771 386 aa7.43□□□□□ -1.22
RPF2YKR081C BOI1P38041 980 aaKnown RBP7.43□□□□□ -1.22
RPF2YKR081C GIP2P40036 548 aa7.43□□□□□ -1.22
RPF2YKR081C TED1P40533 473 aa7.43□□□□□ -1.22
RPF2YKR081C TY4B-PA0A0B7P3V8 1104 aa7.42□□□□□ -1.22
RPF2YKR081C HXT8P40886 569 aa7.42□□□□□ -1.22
RPF2YKR081C TY4A-HQ6Q5P6 413 aa7.42□□□□□ -1.22
RPF2YKR081C MSN1P22148 382 aa7.41□□□□□ -1.22
RPF2YKR081C YIL165CP40446 119 aa7.41□□□□□ -1.22
RPF2YKR081C PPT1P53043 513 aa7.41□□□□□ -1.22
RPF2YKR081C RSC6P25632 483 aa7.4□□□□□ -1.22
RPF2YKR081C SUT1P53032 299 aaKnown RBP7.4□□□□□ -1.22
RPF2YKR081C RPB10P22139 70 aa7.39□□□□□ -1.23
RPF2YKR081C ATG1P53104 897 aa7.39□□□□□ -1.23
RPF2YKR081C KTR2P33550 425 aa7.38□□□□□ -1.23
RPF2YKR081C GLO3P38682 493 aaKnown RBP7.38□□□□□ -1.23
RPF2YKR081C DSE4P53753 1117 aa7.38□□□□□ -1.23
RPF2YKR081C SMC1P32908 1225 aa7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms