RNA–Protein interactions for RNA: YKL096W

CWP1, Transcript of Cell wall mannoprotein that localizes to birth scars of daughter cells, yeast

Gene CWP1, Length 720 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWP1	YKL096W	YIR014W	P40570	242 aa		13.57	□□□□□ -0.24
CWP1	YKL096W	IRC4	Q03036	179 aa		13.57	□□□□□ -0.24
CWP1	YKL096W	ICL1	P28240	557 aa	Predicted RBP	13.56	□□□□□ -0.24
CWP1	YKL096W	YKU70	P32807	602 aa		13.56	□□□□□ -0.24
CWP1	YKL096W	DLD1	P32891	587 aa		13.56	□□□□□ -0.24
CWP1	YKL096W	SET4	P42948	560 aa		13.56	□□□□□ -0.24
CWP1	YKL096W	RIM20	Q12033	661 aa		13.56	□□□□□ -0.24
CWP1	YKL096W	FAS2	P19097	1887 aa	Known RBP	13.55	□□□□□ -0.24
CWP1	YKL096W	OSH3	P38713	996 aa	Known RBP	13.55	□□□□□ -0.24
CWP1	YKL096W	HKR1	P41809	1802 aa		13.55	□□□□□ -0.24
CWP1	YKL096W	AAP1	P37898	856 aa	Known RBP	13.54	□□□□□ -0.24
CWP1	YKL096W	HXT13	P39924	564 aa		13.53	□□□□□ -0.24
CWP1	YKL096W	PBY1	P38254	753 aa		13.52	□□□□□ -0.25
CWP1	YKL096W	HXT17	P53631	564 aa		13.52	□□□□□ -0.25
CWP1	YKL096W	INM2	Q05533	292 aa		13.52	□□□□□ -0.25
CWP1	YKL096W	PSF3	Q12146	194 aa		13.52	□□□□□ -0.25
CWP1	YKL096W	RPS9B	P05755	195 aa	Known RBP	13.51	□□□□□ -0.25
CWP1	YKL096W	SHC1	P39000	512 aa		13.51	□□□□□ -0.25
CWP1	YKL096W	YIR042C	P40586	236 aa		13.51	□□□□□ -0.25
CWP1	YKL096W	DPL1	Q05567	589 aa		13.51	□□□□□ -0.25
CWP1	YKL096W	FPR4	Q06205	392 aa	Predicted RBP	13.51	□□□□□ -0.25
CWP1	YKL096W	TOS4	Q06266	489 aa		13.51	□□□□□ -0.25
CWP1	YKL096W	OPI1	P21957	404 aa		13.5	□□□□□ -0.25
CWP1	YKL096W	NPL4	P33755	580 aa		13.5	□□□□□ -0.25
CWP1	YKL096W	YFH7	P43591	353 aa		13.5	□□□□□ -0.25
CWP1	YKL096W	BBC1	P47068	1157 aa		13.5	□□□□□ -0.25
CWP1	YKL096W	GAS5	Q08193	484 aa		13.5	□□□□□ -0.25
CWP1	YKL096W	CYB2	P00175	591 aa		13.49	□□□□□ -0.25
CWP1	YKL096W	GRX7	P38068	203 aa		13.49	□□□□□ -0.25
CWP1	YKL096W	STM1	P39015	273 aa	Known RBP	13.49	□□□□□ -0.25
CWP1	YKL096W	PKH3	Q03306	898 aa	Predicted RBP	13.49	□□□□□ -0.25
CWP1	YKL096W	RPT3	P33298	428 aa	Known RBP	13.48	□□□□□ -0.25
CWP1	YKL096W	YMR147W	P40218	223 aa	Known RBP	13.48	□□□□□ -0.25
CWP1	YKL096W	KAR5	Q04746	504 aa		13.48	□□□□□ -0.25
CWP1	YKL096W	WRS1	Q12109	432 aa	Known RBP	13.48	□□□□□ -0.25
CWP1	YKL096W	LAM4	P38800	1345 aa		13.47	□□□□□ -0.25
CWP1	YKL096W	TIF4632	P39936	914 aa	Known RBP	13.47	□□□□□ -0.25
CWP1	YKL096W	JJJ2	P46997	583 aa		13.47	□□□□□ -0.25
CWP1	YKL096W	PRP42	Q03776	544 aa	Known RBP	13.47	□□□□□ -0.25
CWP1	YKL096W	PTK1	P36002	662 aa	Predicted RBP	13.46	□□□□□ -0.25
CWP1	YKL096W	GEF1	P37020	779 aa		13.46	□□□□□ -0.25
CWP1	YKL096W	TOP1	P04786	769 aa		13.45	□□□□□ -0.26
CWP1	YKL096W	ARG82	P07250	355 aa		13.45	□□□□□ -0.26
CWP1	YKL096W	SSA1	P10591	642 aa	Known RBP	13.45	□□□□□ -0.26
CWP1	YKL096W	SNF3	P10870	884 aa		13.44	□□□□□ -0.26
CWP1	YKL096W	IOC3	P43596	787 aa		13.44	□□□□□ -0.26
CWP1	YKL096W	RRG1	Q12167	365 aa	Predicted RBP	13.44	□□□□□ -0.26
CWP1	YKL096W	TAH18	Q12181	623 aa		13.44	□□□□□ -0.26
CWP1	YKL096W	OPY1	P38271	328 aa		13.43	□□□□□ -0.26
CWP1	YKL096W	GSM1	P42950	618 aa		13.43	□□□□□ -0.26
CWP1	YKL096W	IRC8	P47046	822 aa		13.43	□□□□□ -0.26
CWP1	YKL096W	ATG20	Q07528	640 aa		13.43	□□□□□ -0.26
CWP1	YKL096W	TRL1	P09880	827 aa	Known RBP	13.42	□□□□□ -0.26
CWP1	YKL096W	BOI1	P38041	980 aa	Known RBP	13.42	□□□□□ -0.26
CWP1	YKL096W	ENP2	P48234	707 aa	Known RBP	13.41	□□□□□ -0.26
CWP1	YKL096W	FLO11	P08640	1367 aa		13.41	□□□□□ -0.26
CWP1	YKL096W	MET1	P36150	593 aa		13.4	□□□□□ -0.26
CWP1	YKL096W	FPK1	P53739	893 aa		13.4	□□□□□ -0.26
CWP1	YKL096W	TPM1	P17536	199 aa	Known RBP	13.39	□□□□□ -0.27
CWP1	YKL096W	AFG2	P32794	780 aa		13.39	□□□□□ -0.27
CWP1	YKL096W	AIM9	P40053	627 aa	Known RBP	13.39	□□□□□ -0.27
CWP1	YKL096W	SQS1	P53866	767 aa	Known RBP	13.39	□□□□□ -0.27
CWP1	YKL096W	ACK1	Q07622	623 aa	Predicted RBP	13.39	□□□□□ -0.27
CWP1	YKL096W	PPM2	Q08282	695 aa		13.39	□□□□□ -0.27
CWP1	YKL096W	RPS7A	P26786	190 aa	Known RBP	13.38	□□□□□ -0.27
CWP1	YKL096W	MDL2	P33311	773 aa		13.38	□□□□□ -0.27
CWP1	YKL096W	COQ1	P18900	473 aa		13.37	□□□□□ -0.27
CWP1	YKL096W	MSM1	P22438	575 aa		13.37	□□□□□ -0.27
CWP1	YKL096W	APL6	P46682	809 aa		13.37	□□□□□ -0.27
CWP1	YKL096W	SSF2	Q12153	453 aa	Predicted RBP	13.37	□□□□□ -0.27
CWP1	YKL096W	RLF2	Q12495	606 aa		13.37	□□□□□ -0.27
CWP1	YKL096W	FLO1	P32768	1537 aa		13.37	□□□□□ -0.27
CWP1	YKL096W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.36	□□□□□ -0.27	not detected
CWP1	YKL096W	SPO22	P40511	975 aa		13.36	□□□□□ -0.27
CWP1	YKL096W	PUS6	P53294	404 aa		13.36	□□□□□ -0.27
CWP1	YKL096W	NSG2	P53898	299 aa		13.36	□□□□□ -0.27
CWP1	YKL096W	CRF1	Q04930	467 aa		13.36	□□□□□ -0.27
CWP1	YKL096W	RNR2	P09938	399 aa	Known RBP	13.35	□□□□□ -0.27
CWP1	YKL096W	PCT1	P13259	424 aa		13.35	□□□□□ -0.27
CWP1	YKL096W	PIP2	P52960	996 aa		13.35	□□□□□ -0.27
CWP1	YKL096W	CIC1	P38779	376 aa	Known RBP	13.34	□□□□□ -0.27
CWP1	YKL096W	YJL171C	P46992	396 aa		13.34	□□□□□ -0.27
CWP1	YKL096W	PGA3	Q12746	312 aa	Known RBP	13.33	□□□□□ -0.28
CWP1	YKL096W	CRG1	P38892	291 aa	RIP-Chip data	13.32	□□□□□ -0.28	not detected
CWP1	YKL096W	UTP7	P40055	554 aa	Known RBP	13.32	□□□□□ -0.28
CWP1	YKL096W	CHO2	P05374	869 aa	Known RBP	13.31	□□□□□ -0.28
CWP1	YKL096W	SRS2	P12954	1174 aa		13.31	□□□□□ -0.28
CWP1	YKL096W	GAP1	P19145	602 aa	Predicted RBP	13.31	□□□□□ -0.28
CWP1	YKL096W	PEP3	P27801	918 aa		13.31	□□□□□ -0.28
CWP1	YKL096W	GLC3	P32775	704 aa		13.31	□□□□□ -0.28
CWP1	YKL096W	RTS1	P38903	757 aa		13.31	□□□□□ -0.28
CWP1	YKL096W	ECM23	Q02710	187 aa		13.31	□□□□□ -0.28
CWP1	YKL096W	STV1	P37296	890 aa		13.3	□□□□□ -0.28
CWP1	YKL096W	SLI15	P38283	698 aa		13.3	□□□□□ -0.28
CWP1	YKL096W	RRP8	P38961	392 aa	Known RBP	13.3	□□□□□ -0.28
CWP1	YKL096W	KRI1	P42846	591 aa	Known RBP	13.3	□□□□□ -0.28
CWP1	YKL096W	MTC3	P53077	123 aa		13.3	□□□□□ -0.28
CWP1	YKL096W	RPS15	Q01855	142 aa	Known RBP	13.3	□□□□□ -0.28
CWP1	YKL096W	TRM44	Q02648	567 aa	Known RBP	13.3	□□□□□ -0.28
CWP1	YKL096W	SPN1	Q06505	410 aa	Predicted RBP	13.3	□□□□□ -0.28

Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms