RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C RPT2P40327 437 aaKnown RBP2.52□□□□□ -2.01
RTT101YJL047C YJR120WP47157 116 aa2.52□□□□□ -2.01
RTT101YJL047C GDE1Q02979 1223 aa2.52□□□□□ -2.01
RTT101YJL047C CEF1Q03654 590 aaPredicted RBP2.52□□□□□ -2.01
RTT101YJL047C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
RTT101YJL047C PML39Q03760 334 aa2.52□□□□□ -2.01
RTT101YJL047C UTP14Q04500 899 aaKnown RBP2.52□□□□□ -2.01
RTT101YJL047C FRA1Q07825 749 aa2.52□□□□□ -2.01
RTT101YJL047C TFB4Q12004 338 aa2.52□□□□□ -2.01
RTT101YJL047C DPS1P04802 557 aaKnown RBP2.51□□□□□ -2.01
RTT101YJL047C KEX2P13134 814 aa2.51□□□□□ -2.01
RTT101YJL047C VAN1P23642 535 aa2.51□□□□□ -2.01
RTT101YJL047C MRC1P25588 1096 aa2.51□□□□□ -2.01
RTT101YJL047C THI4P32318 326 aa2.51□□□□□ -2.01
RTT101YJL047C MNR2P35724 969 aa2.51□□□□□ -2.01
RTT101YJL047C PRE3P38624 215 aa2.51□□□□□ -2.01
RTT101YJL047C FAA3P39002 694 aa2.51□□□□□ -2.01
RTT101YJL047C YGR122WP53272 402 aa2.51□□□□□ -2.01
RTT101YJL047C PUS6P53294 404 aa2.51□□□□□ -2.01
RTT101YJL047C TDA5Q06417 326 aaKnown RBP2.51□□□□□ -2.01
RTT101YJL047C YLR125WQ12138 136 aa2.51□□□□□ -2.01
RTT101YJL047C TSC13Q99190 310 aa2.51□□□□□ -2.01
RTT101YJL047C NOP14Q99207 810 aaKnown RBP2.51□□□□□ -2.01
RTT101YJL047C HAL5P38970 855 aaKnown RBP2.51□□□□□ -2.01
RTT101YJL047C SPF1P39986 1215 aaKnown RBP2.51□□□□□ -2.01
RTT101YJL047C FIG4P42837 879 aa2.51□□□□□ -2.01
RTT101YJL047C TYW3P53177 273 aa2.51□□□□□ -2.01
RTT101YJL047C NAN1Q02931 896 aaKnown RBP2.51□□□□□ -2.01
RTT101YJL047C SPO20Q04359 397 aa2.51□□□□□ -2.01
RTT101YJL047C MPC54Q08550 464 aa2.51□□□□□ -2.01
RTT101YJL047C YRR1Q12172 810 aa2.51□□□□□ -2.01
RTT101YJL047C TMA17Q12513 150 aa2.51□□□□□ -2.01
RTT101YJL047C TEC1P18412 486 aa2.5□□□□□ -2.01
RTT101YJL047C DUT1P33317 147 aa2.5□□□□□ -2.01
RTT101YJL047C SNF7P39929 240 aaKnown RBP2.5□□□□□ -2.01
RTT101YJL047C RSP5P39940 809 aaKnown RBP2.5□□□□□ -2.01
RTT101YJL047C IES5P40060 125 aa2.5□□□□□ -2.01
RTT101YJL047C SPR3P41901 512 aa2.5□□□□□ -2.01
RTT101YJL047C FLC1Q08967 793 aa2.5□□□□□ -2.01
RTT101YJL047C SLX4Q12098 748 aa2.5□□□□□ -2.01
RTT101YJL047C TRS33Q99394 268 aa2.5□□□□□ -2.01
RTT101YJL047C HXK1P04806 485 aaKnown RBP2.5□□□□□ -2.01
RTT101YJL047C RPL8AP17076 256 aaKnown RBP2.5□□□□□ -2.01
RTT101YJL047C RPN12P32496 274 aa2.5□□□□□ -2.01
RTT101YJL047C CWC22P53333 577 aaKnown RBP2.5□□□□□ -2.01
RTT101YJL047C STE20Q03497 939 aaKnown RBP2.5□□□□□ -2.01
RTT101YJL047C ATG16Q03818 150 aa2.5□□□□□ -2.01
RTT101YJL047C MTC5Q03897 1148 aa2.5□□□□□ -2.01
RTT101YJL047C OPI10Q08202 246 aa2.5□□□□□ -2.01
RTT101YJL047C NTG2Q08214 380 aa2.5□□□□□ -2.01
RTT101YJL047C APC11Q12157 165 aa2.5□□□□□ -2.01
RTT101YJL047C YDL206WQ12424 762 aa2.5□□□□□ -2.01
RTT101YJL047C ERP4Q12450 207 aa2.5□□□□□ -2.01
RTT101YJL047C RAM1P22007 431 aa2.49□□□□□ -2.01
RTT101YJL047C GUT2P32191 649 aa2.49□□□□□ -2.01
RTT101YJL047C ISC10P32645 267 aa2.49□□□□□ -2.01
RTT101YJL047C YBR197CP38306 217 aa2.49□□□□□ -2.01
RTT101YJL047C HOS4P40480 1083 aa2.49□□□□□ -2.01
RTT101YJL047C BDP1P46678 594 aa2.49□□□□□ -2.01
RTT101YJL047C YGR021WP53212 290 aa2.49□□□□□ -2.01
RTT101YJL047C SND1Q04007 877 aa2.49□□□□□ -2.01
RTT101YJL047C UTP13Q05946 817 aaKnown RBP2.49□□□□□ -2.01
RTT101YJL047C BDS1Q08347 646 aa2.49□□□□□ -2.01
RTT101YJL047C CBC2Q08920 208 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
RTT101YJL047C SNU66Q12420 587 aaPredicted RBP2.49□□□□□ -2.01
RTT101YJL047C CIT1P00890 479 aa2.49□□□□□ -2.01
RTT101YJL047C MPH2P0CD99 609 aa2.49□□□□□ -2.01
RTT101YJL047C CDC34P14682 295 aa2.49□□□□□ -2.01
RTT101YJL047C GCD6P32501 712 aaKnown RBP2.49□□□□□ -2.01
RTT101YJL047C STE5P32917 917 aa2.49□□□□□ -2.01
RTT101YJL047C VPS35P34110 944 aa2.49□□□□□ -2.01
RTT101YJL047C VRP1P37370 817 aa2.49□□□□□ -2.01
RTT101YJL047C VID27P40157 782 aa2.49□□□□□ -2.01
RTT101YJL047C ATG3P40344 310 aa2.49□□□□□ -2.01
RTT101YJL047C NIT1P40447 199 aa2.49□□□□□ -2.01
RTT101YJL047C STR2P47164 639 aa2.49□□□□□ -2.01
RTT101YJL047C TGL2P54857 326 aa2.49□□□□□ -2.01
RTT101YJL047C TBF1Q02457 562 aa2.49□□□□□ -2.01
RTT101YJL047C ATG13Q06628 738 aa2.49□□□□□ -2.01
RTT101YJL047C CCP1P00431 361 aa2.48□□□□□ -2.01
RTT101YJL047C SPT2P06843 333 aaPredicted RBP2.48□□□□□ -2.01
RTT101YJL047C DAL5P15365 543 aa2.48□□□□□ -2.01
RTT101YJL047C UBP1P25037 809 aa2.48□□□□□ -2.01
RTT101YJL047C YHL008CP38750 627 aa2.48□□□□□ -2.01
RTT101YJL047C CHZ1P40019 153 aaPredicted RBP2.48□□□□□ -2.01
RTT101YJL047C AIM9P40053 627 aaKnown RBP2.48□□□□□ -2.01
RTT101YJL047C RPS0BP46654 252 aaKnown RBP2.48□□□□□ -2.01
RTT101YJL047C PEX21P50091 288 aa2.48□□□□□ -2.01
RTT101YJL047C ESF2P53743 316 aaKnown RBP2.48□□□□□ -2.01
RTT101YJL047C CAB1Q04430 367 aa2.48□□□□□ -2.01
RTT101YJL047C ESC2Q06340 456 aa2.48□□□□□ -2.01
RTT101YJL047C YDL129WQ07555 291 aa2.48□□□□□ -2.01
RTT101YJL047C YPR015CQ12531 247 aa2.48□□□□□ -2.01
RTT101YJL047C HIR1P32479 840 aa2.48□□□□□ -2.01
RTT101YJL047C MFT1P33441 392 aaKnown RBP2.48□□□□□ -2.01
RTT101YJL047C MAL31P38156 614 aa2.48□□□□□ -2.01
RTT101YJL047C DAS1P47005 663 aa2.48□□□□□ -2.01
RTT101YJL047C YGR053CP53234 283 aa2.48□□□□□ -2.01
RTT101YJL047C UFD2P54860 961 aa2.48□□□□□ -2.01
RTT101YJL047C PEX29Q03370 554 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 115.7 ms