RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W RRM3P38766 723 aa4.07□□□□□ -1.76
RPL40AYIL148W YFL034WP43564 1073 aa4.07□□□□□ -1.76
RPL40AYIL148W YKR073CP36153 106 aa4.06□□□□□ -1.76
RPL40AYIL148W SKP1P52286 194 aa4.06□□□□□ -1.76
RPL40AYIL148W TRP3P00937 484 aa4.05□□□□□ -1.76
RPL40AYIL148W NCL1P38205 684 aaKnown RBP4.05□□□□□ -1.76
RPL40AYIL148W ARI1P53111 347 aaKnown RBP4.05□□□□□ -1.76
RPL40AYIL148W YNR040WP53736 256 aa4.05□□□□□ -1.76
RPL40AYIL148W CUS1Q02554 436 aaPredicted RBP4.05□□□□□ -1.76
RPL40AYIL148W MRP10O75012 95 aa4.04□□□□□ -1.76
RPL40AYIL148W CYT1P07143 309 aa4.04□□□□□ -1.76
RPL40AYIL148W RTG2P32608 588 aaKnown RBP4.04□□□□□ -1.76
RPL40AYIL148W ATG32P40458 529 aa4.04□□□□□ -1.76
RPL40AYIL148W TSC13Q99190 310 aa4.04□□□□□ -1.76
RPL40AYIL148W TIF1P10081 395 aaKnown RBP4.03□□□□□ -1.76
RPL40AYIL148W SSA4P22202 642 aaKnown RBP4.03□□□□□ -1.76
RPL40AYIL148W MRX10Q05648 414 aa4.03□□□□□ -1.76
RPL40AYIL148W ENO1P00924 437 aaKnown RBP4.02□□□□□ -1.77
RPL40AYIL148W SFA1P32771 386 aa4.02□□□□□ -1.77
RPL40AYIL148W MED7Q08278 222 aa4.02□□□□□ -1.77
RPL40AYIL148W YLR122CQ12312 125 aa4.02□□□□□ -1.77
RPL40AYIL148W COQ2P32378 372 aa4.01□□□□□ -1.77
RPL40AYIL148W KAP122P32767 1081 aa4.01□□□□□ -1.77
RPL40AYIL148W KAE1P36132 386 aa4.01□□□□□ -1.77
RPL40AYIL148W APM2P38700 605 aa4.01□□□□□ -1.77
RPL40AYIL148W CTH1P47976 325 aa4.01□□□□□ -1.77
RPL40AYIL148W UTP4Q06679 776 aaKnown RBP4.01□□□□□ -1.77
RPL40AYIL148W NAB2P32505 525 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
RPL40AYIL148W LIP5P32875 414 aa4□□□□□ -1.77
RPL40AYIL148W IDI1P15496 288 aa3.99□□□□□ -1.77
RPL40AYIL148W RPC31P17890 251 aa3.99□□□□□ -1.77
RPL40AYIL148W NGR1P32831 672 aaKnown RBP3.99□□□□□ -1.77
RPL40AYIL148W TOS1P38288 455 aa3.99□□□□□ -1.77
RPL40AYIL148W HXT5P38695 592 aa3.99□□□□□ -1.77
RPL40AYIL148W SSA1P10591 642 aaKnown RBP3.98□□□□□ -1.77
RPL40AYIL148W PEP12P32854 288 aa3.98□□□□□ -1.77
RPL40AYIL148W SIS2P36024 562 aa3.98□□□□□ -1.77
RPL40AYIL148W ACS2P52910 683 aaKnown RBP3.98□□□□□ -1.77
RPL40AYIL148W RPL34AP87262 121 aaPredicted RBP3.98□□□□□ -1.77
RPL40AYIL148W PUB1P32588 453 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
RPL40AYIL148W SCD5P34758 872 aa3.97□□□□□ -1.77
RPL40AYIL148W AOS1Q06624 347 aa3.97□□□□□ -1.77
RPL40AYIL148W UBP1P25037 809 aa3.96□□□□□ -1.78
RPL40AYIL148W RSC6P25632 483 aa3.96□□□□□ -1.78
RPL40AYIL148W CPS1P27614 576 aa3.96□□□□□ -1.78
RPL40AYIL148W SAF1P38352 637 aa3.96□□□□□ -1.78
RPL40AYIL148W TED1P40533 473 aa3.96□□□□□ -1.78
RPL40AYIL148W ITC1P53125 1264 aa3.96□□□□□ -1.78
RPL40AYIL148W YGR130CP53278 816 aa3.96□□□□□ -1.78
RPL40AYIL148W SUB2Q07478 446 aaKnown RBP3.96□□□□□ -1.78
RPL40AYIL148W BRE4Q07660 1125 aa3.96□□□□□ -1.78
RPL40AYIL148W TY1A-NL1Q12391 440 aaKnown RBP3.96□□□□□ -1.78
RPL40AYIL148W TY4B-PA0A0B7P3V8 1104 aa3.95□□□□□ -1.78
RPL40AYIL148W NAM7P30771 971 aaKnown RBP3.95□□□□□ -1.78
RPL40AYIL148W QDR2P40474 542 aa3.95□□□□□ -1.78
RPL40AYIL148W SLP1Q12232 587 aa3.95□□□□□ -1.78
RPL40AYIL148W TY4A-HQ6Q5P6 413 aa3.95□□□□□ -1.78
RPL40AYIL148W CHS2P14180 963 aa3.94□□□□□ -1.78
RPL40AYIL148W ELM1P32801 640 aa3.94□□□□□ -1.78
RPL40AYIL148W GEF1P37020 779 aa3.94□□□□□ -1.78
RPL40AYIL148W AKR1P39010 764 aa3.94□□□□□ -1.78
RPL40AYIL148W KTR7P40504 517 aa3.94□□□□□ -1.78
RPL40AYIL148W PHO87P25360 923 aa3.93□□□□□ -1.78
RPL40AYIL148W TTI1P36097 1038 aa3.93□□□□□ -1.78
RPL40AYIL148W GIP2P40036 548 aa3.93□□□□□ -1.78
RPL40AYIL148W YER156CP40093 338 aaKnown RBP3.93□□□□□ -1.78
RPL40AYIL148W SOK2P53438 785 aaPredicted RBP3.93□□□□□ -1.78
RPL40AYIL148W MAG2Q06436 670 aaKnown RBP3.93□□□□□ -1.78
RPL40AYIL148W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
RPL40AYIL148W GAS4Q08271 471 aa3.92□□□□□ -1.78
RPL40AYIL148W CYC7P00045 113 aa3.91□□□□□ -1.78
RPL40AYIL148W HAP4P14064 554 aa3.9□□□□□ -1.79
RPL40AYIL148W ROM1P53046 1155 aa3.9□□□□□ -1.79
RPL40AYIL148W REC8Q12188 680 aa3.9□□□□□ -1.79
RPL40AYIL148W RNQ1P25367 405 aa3.89□□□□□ -1.79
RPL40AYIL148W SEA4P38164 1038 aa3.89□□□□□ -1.79
RPL40AYIL148W BSD2P38356 321 aa3.89□□□□□ -1.79
RPL40AYIL148W SPO74P45819 413 aa3.89□□□□□ -1.79
RPL40AYIL148W YOR296WQ08748 1289 aa3.89□□□□□ -1.79
RPL40AYIL148W TGL4P36165 910 aa3.88□□□□□ -1.79
RPL40AYIL148W UBP5P39944 805 aa3.88□□□□□ -1.79
RPL40AYIL148W YJL181WP46987 611 aa3.88□□□□□ -1.79
RPL40AYIL148W DSE4P53753 1117 aa3.88□□□□□ -1.79
RPL40AYIL148W CAB1Q04430 367 aa3.88□□□□□ -1.79
RPL40AYIL148W VMA3P25515 160 aa3.87□□□□□ -1.79
RPL40AYIL148W SLD2P34252 453 aa3.87□□□□□ -1.79
RPL40AYIL148W ECM23Q02710 187 aa3.87□□□□□ -1.79
RPL40AYIL148W CDC3P32457 520 aaKnown RBP3.86□□□□□ -1.79
RPL40AYIL148W SUV3P32580 737 aa3.86□□□□□ -1.79
RPL40AYIL148W GAL2P13181 574 aa3.85□□□□□ -1.79
RPL40AYIL148W MRPL33P20084 86 aa3.85□□□□□ -1.79
RPL40AYIL148W PUP1P25043 261 aa3.85□□□□□ -1.79
RPL40AYIL148W LRG1P35688 1017 aa3.85□□□□□ -1.79
RPL40AYIL148W GIP1P38229 639 aa3.85□□□□□ -1.79
RPL40AYIL148W UBX7P38349 436 aa3.85□□□□□ -1.79
RPL40AYIL148W PAN5P38787 379 aa3.85□□□□□ -1.79
RPL40AYIL148W PPT1P53043 513 aa3.85□□□□□ -1.79
RPL40AYIL148W SDH1Q00711 640 aa3.85□□□□□ -1.79
RPL40AYIL148W FOX2Q02207 900 aaKnown RBP3.85□□□□□ -1.79
RPL40AYIL148W NOB1Q08444 459 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms