RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C CWH41P53008 833 aa3.55□□□□□ -1.84
NMD2YHR077C PPM2Q08282 695 aa3.55□□□□□ -1.84
NMD2YHR077C CPA2P03965 1118 aaKnown RBP3.54□□□□□ -1.84
NMD2YHR077C SPL2P38839 148 aa3.54□□□□□ -1.84
NMD2YHR077C RPN11P43588 306 aaKnown RBP3.54□□□□□ -1.84
NMD2YHR077C PEX19Q07418 342 aa3.54□□□□□ -1.84
NMD2YHR077C TSR3Q12094 313 aaKnown RBP3.54□□□□□ -1.84
NMD2YHR077C OPI1P21957 404 aa3.54□□□□□ -1.84
NMD2YHR077C MPE1P35728 441 aaKnown RBP3.54□□□□□ -1.84
NMD2YHR077C RSC1P53236 928 aa3.54□□□□□ -1.84
NMD2YHR077C KEX1P09620 729 aa3.53□□□□□ -1.84
NMD2YHR077C MATALPHA2P0CY08 210 aa3.53□□□□□ -1.84
NMD2YHR077C HMLALPHA2P0CY09 210 aa3.53□□□□□ -1.84
NMD2YHR077C SPO22P40511 975 aa3.53□□□□□ -1.84
NMD2YHR077C MDG1P53885 366 aa3.53□□□□□ -1.84
NMD2YHR077C FPR4Q06205 392 aaPredicted RBP3.53□□□□□ -1.84
NMD2YHR077C NCB2Q92317 146 aa3.53□□□□□ -1.84
NMD2YHR077C CHO2P05374 869 aaKnown RBP3.53□□□□□ -1.84
NMD2YHR077C FBP26P32604 452 aa3.53□□□□□ -1.84
NMD2YHR077C HDA1P53973 706 aa3.53□□□□□ -1.84
NMD2YHR077C APC11Q12157 165 aa3.53□□□□□ -1.84
NMD2YHR077C RDS1P25611 832 aa3.53□□□□□ -1.84
NMD2YHR077C PRX1P34227 261 aaKnown RBP3.53□□□□□ -1.84
NMD2YHR077C YMR147WP40218 223 aaKnown RBP3.53□□□□□ -1.84
NMD2YHR077C VID28P40547 921 aa3.53□□□□□ -1.84
NMD2YHR077C CTR9P89105 1077 aa3.53□□□□□ -1.84
NMD2YHR077C RPL19AP0CX82 189 aaKnown RBP3.52□□□□□ -1.85
NMD2YHR077C RPL19BP0CX83 189 aaPredicted RBP3.52□□□□□ -1.85
NMD2YHR077C BIK1P11709 440 aa3.52□□□□□ -1.85
NMD2YHR077C LCB1P25045 558 aaKnown RBP3.52□□□□□ -1.85
NMD2YHR077C OXP1P28273 1286 aa3.52□□□□□ -1.85
NMD2YHR077C MCM2P29469 868 aa3.52□□□□□ -1.85
NMD2YHR077C PXL1P36166 706 aa3.52□□□□□ -1.85
NMD2YHR077C MAL33P38157 468 aa3.52□□□□□ -1.85
NMD2YHR077C TOS1P38288 455 aa3.52□□□□□ -1.85
NMD2YHR077C CIC1P38779 376 aaKnown RBP3.52□□□□□ -1.85
NMD2YHR077C SER1P33330 395 aaKnown RBP3.52□□□□□ -1.85
NMD2YHR077C NPR3P38742 1146 aa3.52□□□□□ -1.85
NMD2YHR077C TFC8Q12308 588 aa3.52□□□□□ -1.85
NMD2YHR077C MSB4Q12317 492 aa3.52□□□□□ -1.85
NMD2YHR077C HAT1Q12341 374 aa3.52□□□□□ -1.85
NMD2YHR077C DDP1Q99321 188 aaKnown RBP3.52□□□□□ -1.85
NMD2YHR077C COQ1P18900 473 aa3.52□□□□□ -1.85
NMD2YHR077C GRX7P38068 203 aa3.52□□□□□ -1.85
NMD2YHR077C YHL050CP38721 697 aa3.52□□□□□ -1.85
NMD2YHR077C PTK2P47116 818 aaKnown RBP3.52□□□□□ -1.85
NMD2YHR077C LYS4P49367 693 aaPredicted RBP3.52□□□□□ -1.85
NMD2YHR077C LCD1Q04377 747 aa3.52□□□□□ -1.85
NMD2YHR077C ELG1Q12050 791 aa3.52□□□□□ -1.85
NMD2YHR077C MCM4P30665 933 aaKnown RBP3.51□□□□□ -1.85
NMD2YHR077C SRP40P32583 406 aaPredicted RBP3.51□□□□□ -1.85
NMD2YHR077C DID4P36108 232 aa3.51□□□□□ -1.85
NMD2YHR077C RFT1P38206 574 aaPredicted RBP3.51□□□□□ -1.85
NMD2YHR077C OSH3P38713 996 aaKnown RBP3.51□□□□□ -1.85
NMD2YHR077C ICP55P40051 511 aa3.51□□□□□ -1.85
NMD2YHR077C NSG2P53898 299 aa3.51□□□□□ -1.85
NMD2YHR077C THI3Q07471 609 aa3.51□□□□□ -1.85
NMD2YHR077C ATE1P16639 503 aa3.51□□□□□ -1.85
NMD2YHR077C MGM1P32266 881 aa3.51□□□□□ -1.85
NMD2YHR077C FYV10P40492 516 aa3.51□□□□□ -1.85
NMD2YHR077C YGL081WP53156 320 aa3.51□□□□□ -1.85
NMD2YHR077C RIX7Q07844 837 aaKnown RBP3.51□□□□□ -1.85
NMD2YHR077C TAH18Q12181 623 aa3.51□□□□□ -1.85
NMD2YHR077C VPS1P21576 704 aaKnown RBP3.5□□□□□ -1.85
NMD2YHR077C PEP3P27801 918 aa3.5□□□□□ -1.85
NMD2YHR077C STM1P39015 273 aaKnown RBP3.5□□□□□ -1.85
NMD2YHR077C PKH1Q03407 766 aa3.5□□□□□ -1.85
NMD2YHR077C YMR074CQ04773 145 aa3.5□□□□□ -1.85
NMD2YHR077C FKS1P38631 1876 aaKnown RBP3.5□□□□□ -1.85
NMD2YHR077C SNF3P10870 884 aa3.5□□□□□ -1.85
NMD2YHR077C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
NMD2YHR077C MYO3P36006 1272 aa3.5□□□□□ -1.85
NMD2YHR077C PSY4P38193 441 aa3.5□□□□□ -1.85
NMD2YHR077C YHL017WP38745 532 aa3.5□□□□□ -1.85
NMD2YHR077C CCT5P40413 562 aaKnown RBP3.5□□□□□ -1.85
NMD2YHR077C ALD3P54114 506 aa3.5□□□□□ -1.85
NMD2YHR077C GPA1P08539 472 aa3.5□□□□□ -1.85
NMD2YHR077C GLN1P32288 370 aaKnown RBP3.5□□□□□ -1.85
NMD2YHR077C EPL1P43572 832 aa3.5□□□□□ -1.85
NMD2YHR077C TOS4Q06266 489 aa3.5□□□□□ -1.85
NMD2YHR077C DCS2Q12123 353 aa3.5□□□□□ -1.85
NMD2YHR077C SNU66Q12420 587 aaPredicted RBP3.5□□□□□ -1.85
NMD2YHR077C TRS33Q99394 268 aa3.5□□□□□ -1.85
NMD2YHR077C CDC6P09119 513 aa3.49□□□□□ -1.85
NMD2YHR077C NGR1P32831 672 aaKnown RBP3.49□□□□□ -1.85
NMD2YHR077C YIR042CP40586 236 aa3.49□□□□□ -1.85
NMD2YHR077C SET4P42948 560 aa3.49□□□□□ -1.85
NMD2YHR077C ENT3P47160 408 aa3.49□□□□□ -1.85
NMD2YHR077C YPT11P48559 417 aa3.49□□□□□ -1.85
NMD2YHR077C FLO11P08640 1367 aa3.49□□□□□ -1.85
NMD2YHR077C RER2P35196 286 aa3.49□□□□□ -1.85
NMD2YHR077C PBY1P38254 753 aa3.49□□□□□ -1.85
NMD2YHR077C CRG1P38892 291 aaRIP-Chip data3.49□□□□□ -1.85not detected
NMD2YHR077C IRC4Q03036 179 aa3.49□□□□□ -1.85
NMD2YHR077C INM2Q05533 292 aa3.49□□□□□ -1.85
NMD2YHR077C PTC5Q12511 572 aa3.49□□□□□ -1.85
NMD2YHR077C CAF20P12962 161 aaKnown RBP3.48□□□□□ -1.85
NMD2YHR077C STR2P47164 639 aa3.48□□□□□ -1.85
NMD2YHR077C UTP22P53254 1237 aaPredicted RBP3.48□□□□□ -1.85
NMD2YHR077C AAD16Q02895 342 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms