RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C PFK2P16862 959 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
SOD2YHR008C NGR1P32831 672 aaKnown RBP10.49□□□□□ -0.73
SOD2YHR008C LDH1P38139 375 aa10.49□□□□□ -0.73
SOD2YHR008C YJR008WP47085 338 aa10.49□□□□□ -0.73
SOD2YHR008C VPS62P53285 467 aa10.49□□□□□ -0.73
SOD2YHR008C IRC4Q03036 179 aa10.49□□□□□ -0.73
SOD2YHR008C PSF3Q12146 194 aa10.49□□□□□ -0.73
SOD2YHR008C ERG7P38604 731 aa10.48□□□□□ -0.73
SOD2YHR008C WRS1Q12109 432 aaKnown RBP10.48□□□□□ -0.73
SOD2YHR008C WHI3P34761 661 aaKnown RBP10.47□□□□□ -0.73
SOD2YHR008C CST6P40535 587 aa10.47□□□□□ -0.73
SOD2YHR008C NET1P47035 1189 aa10.47□□□□□ -0.73
SOD2YHR008C AAD16Q02895 342 aa10.47□□□□□ -0.73
SOD2YHR008C PEX29Q03370 554 aa10.47□□□□□ -0.73
SOD2YHR008C SWI1P09547 1314 aa10.47□□□□□ -0.73
SOD2YHR008C TPS3P38426 1054 aaKnown RBP10.46□□□□□ -0.73
SOD2YHR008C FIR1P40020 876 aa10.46□□□□□ -0.73
SOD2YHR008C JJJ2P46997 583 aa10.46□□□□□ -0.73
SOD2YHR008C ECM30Q06673 1274 aa10.46□□□□□ -0.73
SOD2YHR008C YMR084WA2P2R3 262 aa10.45□□□□□ -0.74
SOD2YHR008C SET1P38827 1080 aaKnown RBP10.45□□□□□ -0.74
SOD2YHR008C ATG1P53104 897 aa10.45□□□□□ -0.74
SOD2YHR008C ITC1P53125 1264 aa10.45□□□□□ -0.74
SOD2YHR008C PRD1P25375 712 aa10.44□□□□□ -0.74
SOD2YHR008C SRC1Q03707 834 aa10.44□□□□□ -0.74
SOD2YHR008C KEL1P38853 1164 aaKnown RBP10.43□□□□□ -0.74
SOD2YHR008C NUG1P40010 520 aaKnown RBP10.43□□□□□ -0.74
SOD2YHR008C YFL040WP43562 540 aa10.43□□□□□ -0.74
SOD2YHR008C TY3A-GQ12173 290 aa10.43□□□□□ -0.74
SOD2YHR008C TY3A-IQ99219 290 aa10.43□□□□□ -0.74
SOD2YHR008C RAD53P22216 821 aa10.42□□□□□ -0.74
SOD2YHR008C IXR1P33417 597 aa10.42□□□□□ -0.74
SOD2YHR008C YBR287WP38355 427 aa10.42□□□□□ -0.74
SOD2YHR008C FLO1P32768 1537 aa10.42□□□□□ -0.74
SOD2YHR008C YDR306CQ06640 478 aa10.41□□□□□ -0.74
SOD2YHR008C RTR1P40084 226 aaPredicted RBP10.4□□□□□ -0.74
SOD2YHR008C MTC5Q03897 1148 aa10.4□□□□□ -0.74
SOD2YHR008C PSH1Q12161 406 aa10.4□□□□□ -0.74
SOD2YHR008C NUP133P36161 1157 aa10.39□□□□□ -0.75
SOD2YHR008C GYP7P48365 746 aa10.39□□□□□ -0.75
SOD2YHR008C PUS6P53294 404 aa10.39□□□□□ -0.75
SOD2YHR008C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.39□□□□□ -0.75not detected
SOD2YHR008C CDC60P26637 1090 aaKnown RBP10.38□□□□□ -0.75
SOD2YHR008C OCT1P35999 772 aa10.38□□□□□ -0.75
SOD2YHR008C AIM21P40563 679 aa10.38□□□□□ -0.75
SOD2YHR008C YPL034WQ03083 165 aa10.38□□□□□ -0.75
SOD2YHR008C CFT2Q12102 859 aaPredicted RBP10.38□□□□□ -0.75
SOD2YHR008C FMP30Q02883 468 aa10.37□□□□□ -0.75
SOD2YHR008C ICL2Q12031 575 aa10.37□□□□□ -0.75
SOD2YHR008C SUP35P05453 685 aaKnown RBP10.36□□□□□ -0.75
SOD2YHR008C YFH7P43591 353 aa10.36□□□□□ -0.75
SOD2YHR008C PMA1P05030 918 aaKnown RBP10.34□□□□□ -0.75
SOD2YHR008C MCD4P36051 919 aa10.34□□□□□ -0.75
SOD2YHR008C IOC4Q04213 475 aa10.34□□□□□ -0.75
SOD2YHR008C ADP1P25371 1049 aa10.33□□□□□ -0.76
SOD2YHR008C AHC1Q12433 566 aa10.33□□□□□ -0.76
SOD2YHR008C MRP7P12687 371 aa10.32□□□□□ -0.76
SOD2YHR008C UIP5P36137 443 aa10.32□□□□□ -0.76
SOD2YHR008C VAB2P40003 282 aa10.32□□□□□ -0.76
SOD2YHR008C YOR131CQ12486 218 aa10.32□□□□□ -0.76
SOD2YHR008C YDJ1P25491 409 aaKnown RBP10.31□□□□□ -0.76
SOD2YHR008C LYS14P40971 790 aa10.31□□□□□ -0.76
SOD2YHR008C APL6P46682 809 aa10.31□□□□□ -0.76
SOD2YHR008C THI22Q06490 572 aa10.31□□□□□ -0.76
SOD2YHR008C DIT2P21595 489 aa10.3□□□□□ -0.76
SOD2YHR008C RPT3P33298 428 aaKnown RBP10.3□□□□□ -0.76
SOD2YHR008C MSC7P38694 644 aa10.3□□□□□ -0.76
SOD2YHR008C ACA1P39970 489 aa10.3□□□□□ -0.76
SOD2YHR008C PRY3P47033 881 aa10.3□□□□□ -0.76
SOD2YHR008C YJL007CP47080 104 aa10.3□□□□□ -0.76
SOD2YHR008C SNU66Q12420 587 aaPredicted RBP10.3□□□□□ -0.76
SOD2YHR008C MXR1P40029 184 aa10.29□□□□□ -0.76
SOD2YHR008C SRT1Q03175 343 aa10.29□□□□□ -0.76
SOD2YHR008C RTT109Q07794 436 aa10.29□□□□□ -0.76
SOD2YHR008C SUT2Q12286 268 aa10.29□□□□□ -0.76
SOD2YHR008C YDR034W-BQ6Q5X2 51 aa10.29□□□□□ -0.76
SOD2YHR008C TUS1Q06412 1307 aa10.29□□□□□ -0.76
SOD2YHR008C MDM20Q12387 796 aaKnown RBP10.28□□□□□ -0.76
SOD2YHR008C SNF3P10870 884 aa10.27□□□□□ -0.77
SOD2YHR008C SRS2P12954 1174 aa10.27□□□□□ -0.77
SOD2YHR008C UBP12P39538 1254 aa10.25□□□□□ -0.77
SOD2YHR008C AFG3P39925 761 aa10.25□□□□□ -0.77
SOD2YHR008C NOP2P40991 618 aaKnown RBP10.25□□□□□ -0.77
SOD2YHR008C SUB2Q07478 446 aaKnown RBP10.25□□□□□ -0.77
SOD2YHR008C PRE10P21242 288 aaKnown RBP RIP-Chip data10.24□□□□□ -0.77not detected
SOD2YHR008C MET7Q08645 548 aa10.24□□□□□ -0.77
SOD2YHR008C PCL8Q08966 492 aa10.24□□□□□ -0.77
SOD2YHR008C TUB2P02557 457 aaKnown RBP10.23□□□□□ -0.77
SOD2YHR008C KIN1P13185 1064 aa10.23□□□□□ -0.77
SOD2YHR008C YBL028CP38202 106 aa10.23□□□□□ -0.77
SOD2YHR008C HXT10P43581 546 aa10.23□□□□□ -0.77
SOD2YHR008C MPP10P47083 593 aaKnown RBP10.23□□□□□ -0.77
SOD2YHR008C PKC1P24583 1151 aa10.22□□□□□ -0.77
SOD2YHR008C MSH4P40965 878 aaPredicted RBP10.22□□□□□ -0.77
SOD2YHR008C YJR107WP47145 328 aa10.22□□□□□ -0.77
SOD2YHR008C SNU71P53207 620 aaKnown RBP10.22□□□□□ -0.77
SOD2YHR008C BRE5P53741 515 aaKnown RBP10.22□□□□□ -0.77
SOD2YHR008C MAM3Q12296 706 aa10.22□□□□□ -0.77
SOD2YHR008C HIP1P06775 603 aa10.21□□□□□ -0.77
SOD2YHR008C PTK1P36002 662 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms