RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C YGL082WP53155 381 aa7.55□□□□□ -1.2
YPT1YFL038C RPN7Q06103 429 aaKnown RBP7.55□□□□□ -1.2
YPT1YFL038C ELG1Q12050 791 aa7.55□□□□□ -1.2
YPT1YFL038C ADR1P07248 1323 aa7.54□□□□□ -1.2
YPT1YFL038C RIM15P43565 1770 aa7.54□□□□□ -1.2
YPT1YFL038C SER1P33330 395 aaKnown RBP7.54□□□□□ -1.2
YPT1YFL038C MNN4P36044 1178 aa7.54□□□□□ -1.2
YPT1YFL038C YHL017WP38745 532 aa7.54□□□□□ -1.2
YPT1YFL038C BBC1P47068 1157 aa7.54□□□□□ -1.2
YPT1YFL038C NYV1Q12255 253 aa7.54□□□□□ -1.2
YPT1YFL038C CPA2P03965 1118 aaKnown RBP7.53□□□□□ -1.2
YPT1YFL038C MPE1P35728 441 aaKnown RBP7.53□□□□□ -1.2
YPT1YFL038C DID4P36108 232 aa7.53□□□□□ -1.2
YPT1YFL038C MIC60P36112 540 aa7.53□□□□□ -1.2
YPT1YFL038C YNL193WP53870 558 aa7.53□□□□□ -1.2
YPT1YFL038C ARP5P53946 755 aa7.53□□□□□ -1.2
YPT1YFL038C ECM23Q02710 187 aa7.53□□□□□ -1.2
YPT1YFL038C PKH3Q03306 898 aaPredicted RBP7.53□□□□□ -1.2
YPT1YFL038C LAM6Q08001 693 aa7.53□□□□□ -1.2
YPT1YFL038C HAT1Q12341 374 aa7.53□□□□□ -1.2
YPT1YFL038C DDP1Q99321 188 aaKnown RBP7.53□□□□□ -1.2
YPT1YFL038C PIF1P07271 859 aa7.52□□□□□ -1.21
YPT1YFL038C MATALPHA2P0CY08 210 aa7.52□□□□□ -1.21
YPT1YFL038C HMLALPHA2P0CY09 210 aa7.52□□□□□ -1.21
YPT1YFL038C FRS2P15625 503 aaKnown RBP7.52□□□□□ -1.21
YPT1YFL038C MCM2P29469 868 aa7.52□□□□□ -1.21
YPT1YFL038C EBP2P36049 427 aaKnown RBP7.52□□□□□ -1.21
YPT1YFL038C CIC1P38779 376 aaKnown RBP7.52□□□□□ -1.21
YPT1YFL038C MSB4Q12317 492 aa7.52□□□□□ -1.21
YPT1YFL038C PEP3P27801 918 aa7.51□□□□□ -1.21
YPT1YFL038C FBP26P32604 452 aa7.51□□□□□ -1.21
YPT1YFL038C MRPL10P36520 322 aa7.51□□□□□ -1.21
YPT1YFL038C MAL33P38157 468 aa7.51□□□□□ -1.21
YPT1YFL038C VID28P40547 921 aa7.51□□□□□ -1.21
YPT1YFL038C YKE2P52553 114 aa7.51□□□□□ -1.21
YPT1YFL038C YLR407WQ06070 228 aa7.51□□□□□ -1.21
YPT1YFL038C GRE2Q12068 342 aaKnown RBP7.51□□□□□ -1.21
YPT1YFL038C PGA3Q12746 312 aaKnown RBP7.51□□□□□ -1.21
YPT1YFL038C LAM4P38800 1345 aa7.51□□□□□ -1.21
YPT1YFL038C RDS1P25611 832 aa7.5□□□□□ -1.21
YPT1YFL038C SKI2P35207 1287 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
YPT1YFL038C NPR3P38742 1146 aa7.5□□□□□ -1.21
YPT1YFL038C HAL5P38970 855 aaKnown RBP7.5□□□□□ -1.21
YPT1YFL038C SSF2Q12153 453 aaPredicted RBP7.5□□□□□ -1.21
YPT1YFL038C POM152P39685 1337 aa7.5□□□□□ -1.21
YPT1YFL038C UTP10P42945 1769 aaKnown RBP7.49□□□□□ -1.21
YPT1YFL038C PRP40P33203 583 aaKnown RBP7.49□□□□□ -1.21
YPT1YFL038C NPL4P33755 580 aa7.49□□□□□ -1.21
YPT1YFL038C MET1P36150 593 aa7.49□□□□□ -1.21
YPT1YFL038C TAH18Q12181 623 aa7.49□□□□□ -1.21
YPT1YFL038C RFT1P38206 574 aaPredicted RBP7.48□□□□□ -1.21
YPT1YFL038C RFC5P38251 354 aa7.48□□□□□ -1.21
YPT1YFL038C GLO3P38682 493 aaKnown RBP7.48□□□□□ -1.21
YPT1YFL038C CRG1P38892 291 aaRIP-Chip data7.48□□□□□ -1.21not detected
YPT1YFL038C BUD6P41697 788 aa7.48□□□□□ -1.21
YPT1YFL038C ENT3P47160 408 aa7.48□□□□□ -1.21
YPT1YFL038C KAR5Q04746 504 aa7.48□□□□□ -1.21
YPT1YFL038C ESC2Q06340 456 aa7.48□□□□□ -1.21
YPT1YFL038C RRI2Q12348 645 aa7.48□□□□□ -1.21
YPT1YFL038C PGI1P12709 554 aaKnown RBP7.47□□□□□ -1.21
YPT1YFL038C ATE1P16639 503 aa7.47□□□□□ -1.21
YPT1YFL038C IMP2'P32351 346 aa7.47□□□□□ -1.21
YPT1YFL038C NUG1P40010 520 aaKnown RBP7.47□□□□□ -1.21
YPT1YFL038C YMR147WP40218 223 aaKnown RBP7.47□□□□□ -1.21
YPT1YFL038C UBP10P53874 792 aaPredicted RBP7.47□□□□□ -1.21
YPT1YFL038C ESF1Q06344 628 aaKnown RBP7.47□□□□□ -1.21
YPT1YFL038C TRS33Q99394 268 aa7.47□□□□□ -1.21
YPT1YFL038C MPH3P0CE00 602 aa7.46□□□□□ -1.22
YPT1YFL038C CYC8P14922 966 aa7.46□□□□□ -1.22
YPT1YFL038C SIS2P36024 562 aa7.46□□□□□ -1.22
YPT1YFL038C GEF1P37020 779 aa7.46□□□□□ -1.22
YPT1YFL038C YFR006WP43590 535 aa7.46□□□□□ -1.22
YPT1YFL038C ENP2P48234 707 aaKnown RBP7.46□□□□□ -1.22
YPT1YFL038C YPT11P48559 417 aa7.46□□□□□ -1.22
YPT1YFL038C RAT1Q02792 1006 aaKnown RBP7.46□□□□□ -1.22
YPT1YFL038C SPN1Q06505 410 aaPredicted RBP7.46□□□□□ -1.22
YPT1YFL038C NOP58Q12499 511 aaKnown RBP7.46□□□□□ -1.22
YPT1YFL038C GPA1P08539 472 aa7.45□□□□□ -1.22
YPT1YFL038C CBP3P21560 335 aa7.45□□□□□ -1.22
YPT1YFL038C YIL055CP40523 627 aaKnown RBP7.45□□□□□ -1.22
YPT1YFL038C RPN11P43588 306 aaKnown RBP7.45□□□□□ -1.22
YPT1YFL038C IOC3P43596 787 aa7.45□□□□□ -1.22
YPT1YFL038C STU2P46675 888 aa7.45□□□□□ -1.22
YPT1YFL038C YJL181WP46987 611 aa7.45□□□□□ -1.22
YPT1YFL038C SSL2Q00578 843 aa7.45□□□□□ -1.22
YPT1YFL038C SRC1Q03707 834 aa7.45□□□□□ -1.22
YPT1YFL038C SGD1Q06132 899 aa7.45□□□□□ -1.22
YPT1YFL038C DIB1Q06819 143 aaPredicted RBP7.45□□□□□ -1.22
YPT1YFL038C NGR1P32831 672 aaKnown RBP7.44□□□□□ -1.22
YPT1YFL038C FAR11P53917 953 aa7.44□□□□□ -1.22
YPT1YFL038C ALD3P54114 506 aa7.44□□□□□ -1.22
YPT1YFL038C PPM2Q08282 695 aa7.44□□□□□ -1.22
YPT1YFL038C CYB2P00175 591 aa7.43□□□□□ -1.22
YPT1YFL038C RER2P35196 286 aa7.43□□□□□ -1.22
YPT1YFL038C YKT6P36015 200 aaKnown RBP7.43□□□□□ -1.22
YPT1YFL038C RRM3P38766 723 aa7.43□□□□□ -1.22
YPT1YFL038C NPR2P39923 615 aa7.43□□□□□ -1.22
YPT1YFL038C YER130CP39959 443 aa7.43□□□□□ -1.22
YPT1YFL038C TFG2P41896 400 aaPredicted RBP7.43□□□□□ -1.22
YPT1YFL038C IRC8P47046 822 aa7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms