RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM5, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM5	YER146W	CTT1	P06115	562 aa		10.52	□□□□□ -0.73
LSM5	YER146W	TRL1	P09880	827 aa	Known RBP	10.52	□□□□□ -0.73
LSM5	YER146W	CAF20	P12962	161 aa	Known RBP	10.52	□□□□□ -0.73
LSM5	YER146W	BBC1	P47068	1157 aa		10.52	□□□□□ -0.73
LSM5	YER146W	PKH3	Q03306	898 aa	Predicted RBP	10.52	□□□□□ -0.73
LSM5	YER146W	SAS4	Q04003	481 aa		10.52	□□□□□ -0.73
LSM5	YER146W	FPR4	Q06205	392 aa	Predicted RBP	10.52	□□□□□ -0.73
LSM5	YER146W	LCB1	P25045	558 aa	Known RBP	10.51	□□□□□ -0.73
LSM5	YER146W	IME2	P32581	645 aa		10.51	□□□□□ -0.73
LSM5	YER146W	EAF6	P47128	113 aa		10.51	□□□□□ -0.73
LSM5	YER146W	KIN4	Q01919	800 aa		10.51	□□□□□ -0.73
LSM5	YER146W	CYB2	P00175	591 aa		10.5	□□□□□ -0.73
LSM5	YER146W	PCT1	P13259	424 aa		10.5	□□□□□ -0.73
LSM5	YER146W	GEF1	P37020	779 aa		10.5	□□□□□ -0.73
LSM5	YER146W	CWH41	P53008	833 aa		10.5	□□□□□ -0.73
LSM5	YER146W	RPT4	P53549	437 aa	Known RBP	10.5	□□□□□ -0.73
LSM5	YER146W	IRC4	Q03036	179 aa		10.49	□□□□□ -0.73
LSM5	YER146W	KAR5	Q04746	504 aa		10.49	□□□□□ -0.73
LSM5	YER146W	PSF3	Q12146	194 aa		10.49	□□□□□ -0.73
LSM5	YER146W	RRI2	Q12348	645 aa		10.49	□□□□□ -0.73
LSM5	YER146W	LAM4	P38800	1345 aa		10.49	□□□□□ -0.73
LSM5	YER146W	RET1	P22276	1149 aa	Known RBP	10.48	□□□□□ -0.73
LSM5	YER146W	PBY1	P38254	753 aa		10.48	□□□□□ -0.73
LSM5	YER146W	STM1	P39015	273 aa	Known RBP	10.48	□□□□□ -0.73
LSM5	YER146W	GRX6	Q12438	231 aa		10.48	□□□□□ -0.73
LSM5	YER146W	AIM9	P40053	627 aa	Known RBP	10.47	□□□□□ -0.73
LSM5	YER146W	RPS9B	P05755	195 aa	Known RBP	10.46	□□□□□ -0.73
LSM5	YER146W	TPM1	P17536	199 aa	Known RBP	10.46	□□□□□ -0.73
LSM5	YER146W	SPO22	P40511	975 aa		10.46	□□□□□ -0.73
LSM5	YER146W	IOC3	P43596	787 aa		10.46	□□□□□ -0.73
LSM5	YER146W	TAH18	Q12181	623 aa		10.46	□□□□□ -0.73
LSM5	YER146W	LSP1	Q12230	341 aa	Known RBP	10.46	□□□□□ -0.73
LSM5	YER146W	FAS2	P19097	1887 aa	Known RBP	10.46	□□□□□ -0.74
LSM5	YER146W	SET4	P42948	560 aa		10.45	□□□□□ -0.74
LSM5	YER146W	INM2	Q05533	292 aa		10.45	□□□□□ -0.74
LSM5	YER146W	HKR1	P41809	1802 aa		10.44	□□□□□ -0.74
LSM5	YER146W	RNR2	P09938	399 aa	Known RBP	10.44	□□□□□ -0.74
LSM5	YER146W	GRX7	P38068	203 aa		10.44	□□□□□ -0.74
LSM5	YER146W	YMR147W	P40218	223 aa	Known RBP	10.44	□□□□□ -0.74
LSM5	YER146W	YFH7	P43591	353 aa		10.44	□□□□□ -0.74
LSM5	YER146W	WRS1	Q12109	432 aa	Known RBP	10.44	□□□□□ -0.74
LSM5	YER146W	RLF2	Q12495	606 aa		10.44	□□□□□ -0.74
LSM5	YER146W	SNF3	P10870	884 aa		10.43	□□□□□ -0.74
LSM5	YER146W	SRS2	P12954	1174 aa		10.43	□□□□□ -0.74
LSM5	YER146W	YKU70	P32807	602 aa		10.43	□□□□□ -0.74
LSM5	YER146W	YER156C	P40093	338 aa	Known RBP	10.43	□□□□□ -0.74
LSM5	YER146W	YIR042C	P40586	236 aa		10.43	□□□□□ -0.74
LSM5	YER146W	CLC1	P17891	233 aa		10.42	□□□□□ -0.74
LSM5	YER146W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	10.42	□□□□□ -0.74	not detected
LSM5	YER146W	MET1	P36150	593 aa		10.42	□□□□□ -0.74
LSM5	YER146W	IRC8	P47046	822 aa		10.42	□□□□□ -0.74
LSM5	YER146W	SHC1	P39000	512 aa		10.41	□□□□□ -0.74
LSM5	YER146W	ECM23	Q02710	187 aa		10.41	□□□□□ -0.74
LSM5	YER146W	PRP42	Q03776	544 aa	Known RBP	10.41	□□□□□ -0.74
LSM5	YER146W	DPL1	Q05567	589 aa		10.41	□□□□□ -0.74
LSM5	YER146W	TOS4	Q06266	489 aa		10.41	□□□□□ -0.74
LSM5	YER146W	PPM2	Q08282	695 aa		10.41	□□□□□ -0.74
LSM5	YER146W	SSF2	Q12153	453 aa	Predicted RBP	10.41	□□□□□ -0.74
LSM5	YER146W	ARG82	P07250	355 aa		10.4	□□□□□ -0.74
LSM5	YER146W	ICL1	P28240	557 aa	Predicted RBP	10.4	□□□□□ -0.74
LSM5	YER146W	PTK1	P36002	662 aa	Predicted RBP	10.4	□□□□□ -0.74
LSM5	YER146W	BOI1	P38041	980 aa	Known RBP	10.4	□□□□□ -0.74
LSM5	YER146W	JJJ2	P46997	583 aa		10.4	□□□□□ -0.74
LSM5	YER146W	ENP2	P48234	707 aa	Known RBP	10.4	□□□□□ -0.74
LSM5	YER146W	DIP2	Q12220	943 aa	Predicted RBP	10.4	□□□□□ -0.74
LSM5	YER146W	RPT3	P33298	428 aa	Known RBP	10.39	□□□□□ -0.75
LSM5	YER146W	VPS24	P36095	224 aa	Known RBP	10.39	□□□□□ -0.75
LSM5	YER146W	CRG1	P38892	291 aa	RIP-Chip data	10.39	□□□□□ -0.75	not detected
LSM5	YER146W	GAS5	Q08193	484 aa		10.39	□□□□□ -0.75
LSM5	YER146W	COQ1	P18900	473 aa		10.38	□□□□□ -0.75
LSM5	YER146W	PEP3	P27801	918 aa		10.37	□□□□□ -0.75
LSM5	YER146W	CIC1	P38779	376 aa	Known RBP	10.36	□□□□□ -0.75
LSM5	YER146W	TIF4632	P39936	914 aa	Known RBP	10.36	□□□□□ -0.75
LSM5	YER146W	SPN1	Q06505	410 aa	Predicted RBP	10.36	□□□□□ -0.75
LSM5	YER146W	ACK1	Q07622	623 aa	Predicted RBP	10.36	□□□□□ -0.75
LSM5	YER146W	FLO1	P32768	1537 aa		10.36	□□□□□ -0.75
LSM5	YER146W	NPA3	P47122	385 aa		10.35	□□□□□ -0.75
LSM5	YER146W	VPS20	Q04272	221 aa		10.35	□□□□□ -0.75
LSM5	YER146W	RRG1	Q12167	365 aa	Predicted RBP	10.35	□□□□□ -0.75
LSM5	YER146W	MATALPHA2	P0CY08	210 aa		10.34	□□□□□ -0.75
LSM5	YER146W	HMLALPHA2	P0CY09	210 aa		10.34	□□□□□ -0.75
LSM5	YER146W	RTS1	P38903	757 aa		10.34	□□□□□ -0.75
LSM5	YER146W	APL6	P46682	809 aa		10.34	□□□□□ -0.75
LSM5	YER146W	YJL171C	P46992	396 aa		10.34	□□□□□ -0.75
LSM5	YER146W	EAF7	P53911	425 aa	Known RBP	10.34	□□□□□ -0.75
LSM5	YER146W	PGA3	Q12746	312 aa	Known RBP	10.34	□□□□□ -0.75
LSM5	YER146W	CHO2	P05374	869 aa	Known RBP	10.33	□□□□□ -0.76
LSM5	YER146W	FBP26	P32604	452 aa		10.33	□□□□□ -0.76
LSM5	YER146W	MDL2	P33311	773 aa		10.33	□□□□□ -0.76
LSM5	YER146W	RER2	P35196	286 aa		10.33	□□□□□ -0.76
LSM5	YER146W	NSG2	P53898	299 aa		10.33	□□□□□ -0.76
LSM5	YER146W	RPS15	Q01855	142 aa	Known RBP	10.33	□□□□□ -0.76
LSM5	YER146W	FLO11	P08640	1367 aa		10.33	□□□□□ -0.76
LSM5	YER146W	RPL19A	P0CX82	189 aa	Known RBP	10.32	□□□□□ -0.76
LSM5	YER146W	RPL19B	P0CX83	189 aa	Predicted RBP	10.32	□□□□□ -0.76
LSM5	YER146W	MYO3	P36006	1272 aa		10.32	□□□□□ -0.76
LSM5	YER146W	BDH2	P39713	417 aa		10.32	□□□□□ -0.76
LSM5	YER146W	HYR1	P40581	163 aa	Known RBP	10.32	□□□□□ -0.76
LSM5	YER146W	KRI1	P42846	591 aa	Known RBP	10.32	□□□□□ -0.76
LSM5	YER146W	PIP2	P52960	996 aa		10.32	□□□□□ -0.76

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms