RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W SSL1Q04673 461 aaPredicted RBP2.15□□□□□ -2.07
SXM1YDR395W THS1P04801 734 aaKnown RBP2.14□□□□□ -2.07
SXM1YDR395W PRT1P06103 763 aaKnown RBP2.14□□□□□ -2.07
SXM1YDR395W YPL034WQ03083 165 aa2.14□□□□□ -2.07
SXM1YDR395W YPR148CQ06523 435 aa2.14□□□□□ -2.07
SXM1YDR395W AIM44Q99299 758 aa2.14□□□□□ -2.07
SXM1YDR395W RAD4P14736 754 aa2.14□□□□□ -2.07
SXM1YDR395W TIM50Q02776 476 aa2.14□□□□□ -2.07
SXM1YDR395W YRR1Q12172 810 aa2.14□□□□□ -2.07
SXM1YDR395W MOD5P07884 428 aa2.13□□□□□ -2.07
SXM1YDR395W RAD54P32863 898 aa2.13□□□□□ -2.07
SXM1YDR395W RBA50Q04418 439 aa2.13□□□□□ -2.07
SXM1YDR395W LYS2P07702 1392 aa2.13□□□□□ -2.07
SXM1YDR395W NUD1P32336 851 aa2.13□□□□□ -2.07
SXM1YDR395W YKR075CP36155 307 aa2.13□□□□□ -2.07
SXM1YDR395W YER158CP40095 573 aa2.13□□□□□ -2.07
SXM1YDR395W DMA2P53924 522 aa2.13□□□□□ -2.07
SXM1YDR395W AGE1Q04412 482 aa2.13□□□□□ -2.07
SXM1YDR395W YPR084WQ06821 456 aa2.13□□□□□ -2.07
SXM1YDR395W RLF2Q12495 606 aa2.13□□□□□ -2.07
SXM1YDR395W IXR1P33417 597 aa2.13□□□□□ -2.07
SXM1YDR395W TYS1P36421 394 aaKnown RBP2.13□□□□□ -2.07
SXM1YDR395W MVP1P40959 511 aaKnown RBP2.13□□□□□ -2.07
SXM1YDR395W YLR225CQ05948 407 aaKnown RBP2.13□□□□□ -2.07
SXM1YDR395W ERF2Q06551 359 aa2.13□□□□□ -2.07
SXM1YDR395W AFG2P32794 780 aa2.12□□□□□ -2.07
SXM1YDR395W PFF1P38244 976 aa2.12□□□□□ -2.07
SXM1YDR395W OYE3P41816 400 aaPredicted RBP2.12□□□□□ -2.07
SXM1YDR395W BDP1P46678 594 aa2.12□□□□□ -2.07
SXM1YDR395W CSR2Q12734 1121 aa2.12□□□□□ -2.07
SXM1YDR395W POL3P15436 1097 aa2.11□□□□□ -2.07
SXM1YDR395W RGR1P19263 1082 aa2.11□□□□□ -2.07
SXM1YDR395W PUF4P25339 888 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
SXM1YDR395W MET22P32179 357 aa2.11□□□□□ -2.07
SXM1YDR395W PDR3P33200 976 aa2.11□□□□□ -2.07
SXM1YDR395W BRE2P43132 505 aa2.11□□□□□ -2.07
SXM1YDR395W VID30P53076 958 aa2.1□□□□□ -2.07
SXM1YDR395W TFB4Q12004 338 aa2.1□□□□□ -2.07
SXM1YDR395W MET32Q12041 191 aa2.1□□□□□ -2.07
SXM1YDR395W RPN1P38764 993 aaKnown RBP2.1□□□□□ -2.07
SXM1YDR395W SFB3P38810 929 aa2.1□□□□□ -2.07
SXM1YDR395W CSC1Q06538 782 aa2.1□□□□□ -2.07
SXM1YDR395W NOP8Q08287 484 aaPredicted RBP2.1□□□□□ -2.07
SXM1YDR395W YEL077CQ3E7X8 1277 aa2.1□□□□□ -2.07
SXM1YDR395W TOP1P04786 769 aa2.09□□□□□ -2.07
SXM1YDR395W HXT5P38695 592 aa2.09□□□□□ -2.07
SXM1YDR395W MRX12P47084 519 aa2.09□□□□□ -2.07
SXM1YDR395W ULP1Q02724 621 aa2.09□□□□□ -2.07
SXM1YDR395W ATG13Q06628 738 aa2.09□□□□□ -2.07
SXM1YDR395W GRX6Q12438 231 aa2.09□□□□□ -2.07
SXM1YDR395W TY4B-HP0C2J7 1802 aa2.09□□□□□ -2.07
SXM1YDR395W MRF1P30775 413 aaPredicted RBP2.09□□□□□ -2.07
SXM1YDR395W PAC1P39946 494 aaKnown RBP2.09□□□□□ -2.07
SXM1YDR395W YRB30P53107 440 aaPredicted RBP2.09□□□□□ -2.07
SXM1YDR395W COX6P00427 148 aa2.09□□□□□ -2.08
SXM1YDR395W CAF20P12962 161 aaKnown RBP2.09□□□□□ -2.08
SXM1YDR395W SPR3P41901 512 aa2.09□□□□□ -2.08
SXM1YDR395W VPS62P53285 467 aa2.09□□□□□ -2.08
SXM1YDR395W CDC4P07834 779 aa2.08□□□□□ -2.08
SXM1YDR395W MFB1Q04922 465 aa2.08□□□□□ -2.08
SXM1YDR395W RRN7P40992 514 aa2.08□□□□□ -2.08
SXM1YDR395W EMP47P43555 445 aa2.08□□□□□ -2.08
SXM1YDR395W CKB1P43639 278 aa2.08□□□□□ -2.08
SXM1YDR395W PTP1P25044 335 aa2.07□□□□□ -2.08
SXM1YDR395W CHS7P38843 316 aa2.07□□□□□ -2.08
SXM1YDR395W MCM6P53091 1017 aaKnown RBP2.07□□□□□ -2.08
SXM1YDR395W REF2P42073 533 aaPredicted RBP2.07□□□□□ -2.08
SXM1YDR395W ERO1Q03103 563 aa2.07□□□□□ -2.08
SXM1YDR395W HED1Q03937 162 aa2.07□□□□□ -2.08
SXM1YDR395W CAN1P04817 590 aa2.06□□□□□ -2.08
SXM1YDR395W ERG12P07277 443 aa2.06□□□□□ -2.08
SXM1YDR395W KEX2P13134 814 aa2.06□□□□□ -2.08
SXM1YDR395W MSM1P22438 575 aa2.06□□□□□ -2.08
SXM1YDR395W SNU71P53207 620 aaKnown RBP2.06□□□□□ -2.08
SXM1YDR395W TEL1P38110 2787 aa2.06□□□□□ -2.08
SXM1YDR395W GAR1P28007 205 aaKnown RBP2.05□□□□□ -2.08
SXM1YDR395W SYN8P31377 255 aa2.05□□□□□ -2.08
SXM1YDR395W GCD11P32481 527 aaKnown RBP2.05□□□□□ -2.08
SXM1YDR395W PSF2P40359 213 aa2.05□□□□□ -2.08
SXM1YDR395W HUL4P40985 892 aa2.05□□□□□ -2.08
SXM1YDR395W YPR109WQ06104 294 aa2.05□□□□□ -2.08
SXM1YDR395W LCB5Q06147 687 aaKnown RBP2.05□□□□□ -2.08
SXM1YDR395W ICL2Q12031 575 aa2.05□□□□□ -2.08
SXM1YDR395W PRP45P28004 379 aaPredicted RBP2.05□□□□□ -2.08
SXM1YDR395W CWH41P53008 833 aa2.05□□□□□ -2.08
SXM1YDR395W TUB4P53378 473 aa2.05□□□□□ -2.08
SXM1YDR395W TCB1Q12466 1186 aa2.05□□□□□ -2.08
SXM1YDR395W HEM1P09950 548 aaPredicted RBP2.04□□□□□ -2.08
SXM1YDR395W RSC8P43609 557 aaKnown RBP2.04□□□□□ -2.08
SXM1YDR395W HPC2Q01448 625 aa2.04□□□□□ -2.08
SXM1YDR395W YDR444WQ04093 687 aa2.04□□□□□ -2.08
SXM1YDR395W GYL1Q04322 720 aa2.04□□□□□ -2.08
SXM1YDR395W MAM3Q12296 706 aa2.04□□□□□ -2.08
SXM1YDR395W YLL067CQ07888 1374 aa2.04□□□□□ -2.08
SXM1YDR395W FLO1P32768 1537 aa2.04□□□□□ -2.08
SXM1YDR395W TAO3P40468 2376 aa2.04□□□□□ -2.08
SXM1YDR395W AFT1P22149 690 aa2.04□□□□□ -2.08
SXM1YDR395W ATG36P46983 293 aa2.04□□□□□ -2.08
SXM1YDR395W MEC3Q02574 474 aa2.04□□□□□ -2.08
SXM1YDR395W RAT1Q02792 1006 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms