RNA–Protein interactions for RNA: YDR353W

TRR1, Transcript of Cytoplasmic thioredoxin reductase, yeastyeast

Gene TRR1, Length 960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRR1YDR353W KAR3P17119 729 aa8.01□□□□□ -1.13
TRR1YDR353W YMR124WP39523 943 aaKnown RBP8.01□□□□□ -1.13
TRR1YDR353W PTC2P39966 464 aaKnown RBP8.01□□□□□ -1.13
TRR1YDR353W YGL140CP53120 1219 aa8.01□□□□□ -1.13
TRR1YDR353W YEF3P16521 1044 aaKnown RBP8□□□□□ -1.13
TRR1YDR353W ATF2P53296 535 aa8□□□□□ -1.13
TRR1YDR353W PXR1P53335 271 aaPredicted RBP8□□□□□ -1.13
TRR1YDR353W YML082WQ04533 649 aaKnown RBP8□□□□□ -1.13
TRR1YDR353W SML1Q04964 104 aa8□□□□□ -1.13
TRR1YDR353W CYC8P14922 966 aa7.99□□□□□ -1.13
TRR1YDR353W RRP14P36080 434 aaKnown RBP7.99□□□□□ -1.13
TRR1YDR353W YMR102CQ03177 834 aa7.99□□□□□ -1.13
TRR1YDR353W USO1P25386 1790 aa7.99□□□□□ -1.13
TRR1YDR353W TRK1P12685 1235 aa7.98□□□□□ -1.13
TRR1YDR353W RPN12P32496 274 aa7.98□□□□□ -1.13
TRR1YDR353W NDC80P40460 691 aa7.98□□□□□ -1.13
TRR1YDR353W YRF1-4O13559 1382 aa7.97□□□□□ -1.13
TRR1YDR353W PDR1P12383 1068 aa7.97□□□□□ -1.13
TRR1YDR353W RAM1P22007 431 aa7.97□□□□□ -1.13
TRR1YDR353W VPS41P38959 992 aa7.97□□□□□ -1.13
TRR1YDR353W APL5Q08951 932 aaKnown RBP7.97□□□□□ -1.13
TRR1YDR353W TY1B-NL2Q99337 1749 aaKnown RBP7.96□□□□□ -1.14
TRR1YDR353W MRC1P25588 1096 aa7.96□□□□□ -1.14
TRR1YDR353W SPT5P27692 1063 aaKnown RBP7.96□□□□□ -1.14
TRR1YDR353W BDH2P39713 417 aa7.96□□□□□ -1.14
TRR1YDR353W RVS167P39743 482 aaKnown RBP7.96□□□□□ -1.14
TRR1YDR353W RSM25P40496 264 aa7.96□□□□□ -1.14
TRR1YDR353W CAB1Q04430 367 aa7.96□□□□□ -1.14
TRR1YDR353W PSK1P31374 1356 aa7.96□□□□□ -1.14
TRR1YDR353W HST1P53685 503 aa7.95□□□□□ -1.14
TRR1YDR353W AUS1Q08409 1394 aa7.95□□□□□ -1.14
TRR1YDR353W MSH1P25846 959 aa7.94□□□□□ -1.14
TRR1YDR353W MPE1P35728 441 aaKnown RBP7.94□□□□□ -1.14
TRR1YDR353W POL32P47110 350 aa7.94□□□□□ -1.14
TRR1YDR353W ALD3P54114 506 aa7.94□□□□□ -1.14
TRR1YDR353W HSP104P31539 908 aaKnown RBP7.93□□□□□ -1.14
TRR1YDR353W NUD1P32336 851 aa7.93□□□□□ -1.14
TRR1YDR353W HOS4P40480 1083 aa7.93□□□□□ -1.14
TRR1YDR353W BDP1P46678 594 aa7.93□□□□□ -1.14
TRR1YDR353W MPP10P47083 593 aaKnown RBP7.93□□□□□ -1.14
TRR1YDR353W TLG1Q03322 224 aa7.93□□□□□ -1.14
TRR1YDR353W GIN4Q12263 1142 aa7.93□□□□□ -1.14
TRR1YDR353W TAF13P11747 167 aa7.92□□□□□ -1.14
TRR1YDR353W KIN1P13185 1064 aa7.92□□□□□ -1.14
TRR1YDR353W RPC82P32349 654 aa7.92□□□□□ -1.14
TRR1YDR353W RRT14P40470 206 aa7.92□□□□□ -1.14
TRR1YDR353W CIR1P42940 261 aa7.92□□□□□ -1.14
TRR1YDR353W NUP145P49687 1317 aa7.92□□□□□ -1.14
TRR1YDR353W PET123P17558 318 aa7.91□□□□□ -1.14
TRR1YDR353W BCK2P33306 851 aa7.91□□□□□ -1.14
TRR1YDR353W MRPL10P36520 322 aa7.91□□□□□ -1.14
TRR1YDR353W GDT1P38301 280 aaPredicted RBP7.91□□□□□ -1.14
TRR1YDR353W RSC8P43609 557 aaKnown RBP7.91□□□□□ -1.14
TRR1YDR353W NDL1Q06568 189 aa7.91□□□□□ -1.14
TRR1YDR353W YPR015CQ12531 247 aa7.91□□□□□ -1.14
TRR1YDR353W RAD50P12753 1312 aa7.91□□□□□ -1.14
TRR1YDR353W PSO2P30620 661 aa7.9□□□□□ -1.14
TRR1YDR353W PUP2P32379 260 aa7.9□□□□□ -1.14
TRR1YDR353W NPL4P33755 580 aa7.9□□□□□ -1.14
TRR1YDR353W RFC1P38630 861 aaKnown RBP7.9□□□□□ -1.14
TRR1YDR353W YIL092WP40497 633 aa7.9□□□□□ -1.14
TRR1YDR353W HYR1P40581 163 aaKnown RBP7.9□□□□□ -1.14
TRR1YDR353W KRE33P53914 1056 aaKnown RBP7.9□□□□□ -1.14
TRR1YDR353W NOP56Q12460 504 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
TRR1YDR353W KRE5P22023 1365 aa7.89□□□□□ -1.15
TRR1YDR353W TOP1P04786 769 aa7.89□□□□□ -1.15
TRR1YDR353W ARD1P07347 238 aaPredicted RBP7.89□□□□□ -1.15
TRR1YDR353W SAP1P39955 897 aaKnown RBP7.89□□□□□ -1.15
TRR1YDR353W VID30P53076 958 aa7.89□□□□□ -1.15
TRR1YDR353W RRP46P53256 223 aaPredicted RBP7.89□□□□□ -1.15
TRR1YDR353W YLL054CQ12244 843 aa7.89□□□□□ -1.15
TRR1YDR353W DAL5P15365 543 aa7.88□□□□□ -1.15
TRR1YDR353W SIT4P20604 311 aa7.88□□□□□ -1.15
TRR1YDR353W SEC14P24280 304 aaKnown RBP7.88□□□□□ -1.15
TRR1YDR353W MFT1P33441 392 aaKnown RBP7.88□□□□□ -1.15
TRR1YDR353W VRP1P37370 817 aa7.88□□□□□ -1.15
TRR1YDR353W STR2P47164 639 aa7.88□□□□□ -1.15
TRR1YDR353W ISM1P48526 1002 aa7.88□□□□□ -1.15
TRR1YDR353W NIS1P53939 407 aa7.88□□□□□ -1.15
TRR1YDR353W ARP5P53946 755 aa7.88□□□□□ -1.15
TRR1YDR353W TIM50Q02776 476 aa7.88□□□□□ -1.15
TRR1YDR353W TAP42Q04372 366 aa7.88□□□□□ -1.15
TRR1YDR353W TLG2Q08144 397 aa7.88□□□□□ -1.15
TRR1YDR353W APC1P53886 1748 aa7.88□□□□□ -1.15
TRR1YDR353W LYS2P07702 1392 aa7.87□□□□□ -1.15
TRR1YDR353W RTR1P40084 226 aaPredicted RBP7.87□□□□□ -1.15
TRR1YDR353W IAH1P41734 238 aa7.87□□□□□ -1.15
TRR1YDR353W MRX12P47084 519 aa7.87□□□□□ -1.15
TRR1YDR353W PRP31P49704 494 aaPredicted RBP7.87□□□□□ -1.15
TRR1YDR353W SNU71P53207 620 aaKnown RBP7.87□□□□□ -1.15
TRR1YDR353W PEX19Q07418 342 aa7.87□□□□□ -1.15
TRR1YDR353W YOR389WQ08912 624 aa7.87□□□□□ -1.15
TRR1YDR353W HIF1Q12373 385 aa7.87□□□□□ -1.15
TRR1YDR353W KAR2P16474 682 aaKnown RBP7.86□□□□□ -1.15
TRR1YDR353W CDC11P32458 415 aa7.86□□□□□ -1.15
TRR1YDR353W RTF1P53064 558 aa7.86□□□□□ -1.15
TRR1YDR353W RCM1P53972 490 aa7.86□□□□□ -1.15
TRR1YDR353W ORM2Q06144 216 aa7.86□□□□□ -1.15
TRR1YDR353W YPL225WQ08971 146 aaKnown RBP7.86□□□□□ -1.15
TRR1YDR353W SIR4P11978 1358 aa7.85□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms