RNA–Protein interactions for RNA: YDR200C

VPS64, Transcript of Protein required for cytoplasm to vacuole targeting of proteins, yeast

Gene VPS64, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS64	YDR200C	ENO2	P00925	437 aa	Known RBP	4.13	□□□□□ -1.75
VPS64	YDR200C	SUP45	P12385	437 aa	Known RBP	4.13	□□□□□ -1.75
VPS64	YDR200C	ISF1	P32488	338 aa		4.13	□□□□□ -1.75
VPS64	YDR200C	RTG2	P32608	588 aa	Known RBP	4.13	□□□□□ -1.75
VPS64	YDR200C	YBL086C	P38177	466 aa		4.13	□□□□□ -1.75
VPS64	YDR200C	UBP2	Q01476	1272 aa		4.13	□□□□□ -1.75
VPS64	YDR200C	STE20	Q03497	939 aa	Known RBP	4.13	□□□□□ -1.75
VPS64	YDR200C	EMP47	P43555	445 aa		4.12	□□□□□ -1.75
VPS64	YDR200C	YPP1	P46951	817 aa		4.12	□□□□□ -1.75
VPS64	YDR200C	EMW1	P42842	904 aa	Known RBP	4.11	□□□□□ -1.75
VPS64	YDR200C	AAD14	P42884	376 aa		4.11	□□□□□ -1.75
VPS64	YDR200C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
VPS64	YDR200C	DLD1	P32891	587 aa		4.11	□□□□□ -1.75
VPS64	YDR200C	YPR084W	Q06821	456 aa		4.11	□□□□□ -1.75
VPS64	YDR200C	MKS1	P34072	584 aa		4.1	□□□□□ -1.75
VPS64	YDR200C	ROG3	P43602	733 aa		4.1	□□□□□ -1.75
VPS64	YDR200C	TY1A-MR1	Q04215	440 aa		4.1	□□□□□ -1.75
VPS64	YDR200C	FRA1	Q07825	749 aa		4.1	□□□□□ -1.75
VPS64	YDR200C	BUD21	Q08492	214 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS64	YDR200C	RLF2	Q12495	606 aa		4.1	□□□□□ -1.75
VPS64	YDR200C	PDR5	P33302	1511 aa	Known RBP	4.1	□□□□□ -1.75
VPS64	YDR200C	YJR098C	P47139	656 aa		4.09	□□□□□ -1.75
VPS64	YDR200C	RIM21	P48565	533 aa		4.09	□□□□□ -1.75
VPS64	YDR200C	DFG5	Q05031	458 aa		4.09	□□□□□ -1.75
VPS64	YDR200C	ENO1	P00924	437 aa	Known RBP	4.09	□□□□□ -1.76
VPS64	YDR200C	THI12	P42883	340 aa		4.09	□□□□□ -1.76
VPS64	YDR200C	THI5	P43534	340 aa		4.09	□□□□□ -1.76
VPS64	YDR200C	MRX12	P47084	519 aa		4.09	□□□□□ -1.76
VPS64	YDR200C	THI11	P47183	340 aa		4.09	□□□□□ -1.76
VPS64	YDR200C	LYS5	P50113	272 aa		4.09	□□□□□ -1.76
VPS64	YDR200C	THI13	Q07748	340 aa		4.09	□□□□□ -1.76
VPS64	YDR200C	TCB1	Q12466	1186 aa		4.09	□□□□□ -1.76
VPS64	YDR200C	CCP1	P00431	361 aa		4.07	□□□□□ -1.76
VPS64	YDR200C	MDJ1	P35191	511 aa		4.07	□□□□□ -1.76
VPS64	YDR200C	TYS1	P36421	394 aa	Known RBP	4.07	□□□□□ -1.76
VPS64	YDR200C	OSH7	P38755	437 aa		4.07	□□□□□ -1.76
VPS64	YDR200C	ATG3	P40344	310 aa		4.07	□□□□□ -1.76
VPS64	YDR200C	BDS1	Q08347	646 aa		4.07	□□□□□ -1.76
VPS64	YDR200C	JJJ3	P47138	172 aa		4.07	□□□□□ -1.76
VPS64	YDR200C	MRX10	Q05648	414 aa		4.06	□□□□□ -1.76
VPS64	YDR200C	ATG20	Q07528	640 aa		4.06	□□□□□ -1.76
VPS64	YDR200C	GCN2	P15442	1659 aa		4.06	□□□□□ -1.76
VPS64	YDR200C	SOH1	P38633	127 aa		4.05	□□□□□ -1.76
VPS64	YDR200C	NSG2	P53898	299 aa		4.05	□□□□□ -1.76
VPS64	YDR200C	ISR1	Q06098	443 aa	Known RBP	4.05	□□□□□ -1.76
VPS64	YDR200C	IKI3	Q06706	1349 aa	Known RBP	4.04	□□□□□ -1.76
VPS64	YDR200C	RDS2	P19541	446 aa	Known RBP	4.04	□□□□□ -1.76
VPS64	YDR200C	FBP26	P32604	452 aa		4.04	□□□□□ -1.76
VPS64	YDR200C	CCT8	P47079	568 aa	Known RBP	4.04	□□□□□ -1.76
VPS64	YDR200C	CPS1	P27614	576 aa		4.03	□□□□□ -1.76
VPS64	YDR200C	SIS2	P36024	562 aa		4.03	□□□□□ -1.76
VPS64	YDR200C	KTR7	P40504	517 aa		4.03	□□□□□ -1.76
VPS64	YDR200C	APL6	P46682	809 aa		4.03	□□□□□ -1.76
VPS64	YDR200C	CFT1	Q06632	1357 aa	Known RBP	4.03	□□□□□ -1.76
VPS64	YDR200C	TTI1	P36097	1038 aa		4.02	□□□□□ -1.77
VPS64	YDR200C	UTP13	Q05946	817 aa	Known RBP	4.02	□□□□□ -1.77
VPS64	YDR200C	STE6	P12866	1290 aa		4.02	□□□□□ -1.77
VPS64	YDR200C	ISU1	Q03020	165 aa		4.02	□□□□□ -1.77
VPS64	YDR200C	NUP192	P47054	1683 aa		4.02	□□□□□ -1.77
VPS64	YDR200C	SSA4	P22202	642 aa	Known RBP	4.01	□□□□□ -1.77
VPS64	YDR200C	HAL5	P38970	855 aa	Known RBP	4.01	□□□□□ -1.77
VPS64	YDR200C	YFL066C	P43538	392 aa		4.01	□□□□□ -1.77
VPS64	YDR200C	BCK1	Q01389	1478 aa		4.01	□□□□□ -1.77
VPS64	YDR200C	RPP2B	P02400	110 aa	Known RBP	4	□□□□□ -1.77
VPS64	YDR200C	PEP12	P32854	288 aa		4	□□□□□ -1.77
VPS64	YDR200C	DLD3	P39976	496 aa	Known RBP	4	□□□□□ -1.77
VPS64	YDR200C	PDR11	P40550	1411 aa		4	□□□□□ -1.77
VPS64	YDR200C	AI1	P03875	834 aa		4	□□□□□ -1.77
VPS64	YDR200C	DAT1	P13483	248 aa	Known RBP	4	□□□□□ -1.77
VPS64	YDR200C	UTR2	P32623	467 aa		4	□□□□□ -1.77
VPS64	YDR200C	THI72	Q08579	599 aa		4	□□□□□ -1.77
VPS64	YDR200C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
VPS64	YDR200C	KRE5	P22023	1365 aa		3.99	□□□□□ -1.77
VPS64	YDR200C	TBS1	P38114	1094 aa		3.99	□□□□□ -1.77
VPS64	YDR200C	HDA3	Q06623	655 aa		3.99	□□□□□ -1.77
VPS64	YDR200C	YRF1-2	P40105	1681 aa		3.98	□□□□□ -1.77
VPS64	YDR200C	TGL4	P36165	910 aa		3.98	□□□□□ -1.77
VPS64	YDR200C	AIM9	P40053	627 aa	Known RBP	3.98	□□□□□ -1.77
VPS64	YDR200C	NAM8	Q00539	523 aa	Known RBP	3.98	□□□□□ -1.77
VPS64	YDR200C	PDI1	P17967	522 aa	Known RBP	3.98	□□□□□ -1.77
VPS64	YDR200C	YFL034W	P43564	1073 aa		3.98	□□□□□ -1.77
VPS64	YDR200C	RAV1	P47104	1357 aa		3.97	□□□□□ -1.77
VPS64	YDR200C	CDC19	P00549	500 aa	Known RBP	3.97	□□□□□ -1.77
VPS64	YDR200C	SPT2	P06843	333 aa	Predicted RBP	3.97	□□□□□ -1.77
VPS64	YDR200C	YNR029C	P53729	429 aa	Known RBP	3.97	□□□□□ -1.77
VPS64	YDR200C	ECM23	Q02710	187 aa		3.97	□□□□□ -1.77
VPS64	YDR200C	WTM2	Q12206	467 aa		3.97	□□□□□ -1.77
VPS64	YDR200C	SSM4	P40318	1319 aa		3.97	□□□□□ -1.77
VPS64	YDR200C	GAL2	P13181	574 aa		3.96	□□□□□ -1.78
VPS64	YDR200C	PHO87	P25360	923 aa		3.96	□□□□□ -1.78
VPS64	YDR200C	RIA1	P53893	1110 aa		3.96	□□□□□ -1.78
VPS64	YDR200C	SUB2	Q07478	446 aa	Known RBP	3.96	□□□□□ -1.78
VPS64	YDR200C	YPR053C	Q6Q5F3	151 aa		3.96	□□□□□ -1.78
VPS64	YDR200C	TSC13	Q99190	310 aa		3.96	□□□□□ -1.78
VPS64	YDR200C	HAP4	P14064	554 aa		3.95	□□□□□ -1.78
VPS64	YDR200C	PUP1	P25043	261 aa		3.95	□□□□□ -1.78
VPS64	YDR200C	DAL1	P32375	460 aa		3.95	□□□□□ -1.78
VPS64	YDR200C	ACS2	P52910	683 aa	Known RBP	3.95	□□□□□ -1.78
VPS64	YDR200C	UBX7	P38349	436 aa		3.95	□□□□□ -1.78
VPS64	YDR200C	UTP7	P40055	554 aa	Known RBP	3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms