RNA–Protein interactions for RNA: YDR185C

UPS3, Transcript of Mitochondrial protein of unknown function, yeastyeast

Gene UPS3, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPS3YDR185C CWH41P53008 833 aa7.3□□□□□ -1.24
UPS3YDR185C TRS120Q04183 1289 aa7.3□□□□□ -1.24
UPS3YDR185C SRP40P32583 406 aaPredicted RBP7.29□□□□□ -1.24
UPS3YDR185C ALD3P54114 506 aa7.29□□□□□ -1.24
UPS3YDR185C GCR2Q01722 534 aa7.29□□□□□ -1.24
UPS3YDR185C CLN2P20438 545 aa7.28□□□□□ -1.24
UPS3YDR185C RPT1P33299 467 aaKnown RBP7.28□□□□□ -1.24
UPS3YDR185C RRP14P36080 434 aaKnown RBP7.28□□□□□ -1.24
UPS3YDR185C VTC4P47075 721 aa7.28□□□□□ -1.24
UPS3YDR185C MSN5P52918 1224 aa7.28□□□□□ -1.24
UPS3YDR185C LSC2P53312 427 aa7.28□□□□□ -1.24
UPS3YDR185C YKL091CP33324 310 aaKnown RBP7.27□□□□□ -1.25
UPS3YDR185C OSW7P43611 510 aa7.27□□□□□ -1.25
UPS3YDR185C VPS16Q03308 798 aa7.27□□□□□ -1.25
UPS3YDR185C RMD1Q03441 430 aa7.27□□□□□ -1.25
UPS3YDR185C SPR28Q04921 423 aa7.27□□□□□ -1.25
UPS3YDR185C TY1A-DR3Q12441 440 aa7.27□□□□□ -1.25
UPS3YDR185C MCM2P29469 868 aa7.26□□□□□ -1.25
UPS3YDR185C SLA1P32790 1244 aa7.26□□□□□ -1.25
UPS3YDR185C SHM1P37292 490 aaPredicted RBP7.26□□□□□ -1.25
UPS3YDR185C HXT5P38695 592 aa7.26□□□□□ -1.25
UPS3YDR185C FPR3P38911 411 aaKnown RBP7.26□□□□□ -1.25
UPS3YDR185C CAB1Q04430 367 aa7.26□□□□□ -1.25
UPS3YDR185C PIN2Q12057 282 aa7.26□□□□□ -1.25
UPS3YDR185C BOI1P38041 980 aaKnown RBP7.25□□□□□ -1.25
UPS3YDR185C JJJ2P46997 583 aa7.25□□□□□ -1.25
UPS3YDR185C YNL165WP53891 406 aa7.25□□□□□ -1.25
UPS3YDR185C OPT2Q06593 877 aa7.25□□□□□ -1.25
UPS3YDR185C TCB1Q12466 1186 aa7.25□□□□□ -1.25
UPS3YDR185C PHO4P07270 312 aaKnown RBP7.24□□□□□ -1.25
UPS3YDR185C DAL1P32375 460 aa7.24□□□□□ -1.25
UPS3YDR185C GCD6P32501 712 aaKnown RBP7.24□□□□□ -1.25
UPS3YDR185C IOC3P43596 787 aa7.24□□□□□ -1.25
UPS3YDR185C YJL049WP47048 450 aa7.24□□□□□ -1.25
UPS3YDR185C UFD2P54860 961 aa7.24□□□□□ -1.25
UPS3YDR185C SPA2P23201 1466 aaKnown RBP7.24□□□□□ -1.25
UPS3YDR185C PEP7P32609 515 aa7.23□□□□□ -1.25
UPS3YDR185C YBR197CP38306 217 aa7.23□□□□□ -1.25
UPS3YDR185C GPI13Q07830 1017 aa7.23□□□□□ -1.25
UPS3YDR185C WRS1Q12109 432 aaKnown RBP7.23□□□□□ -1.25
UPS3YDR185C SSF2Q12153 453 aaPredicted RBP7.23□□□□□ -1.25
UPS3YDR185C RPS31P05759 152 aaKnown RBP7.22□□□□□ -1.25
UPS3YDR185C MET22P32179 357 aa7.22□□□□□ -1.25
UPS3YDR185C ISC10P32645 267 aa7.22□□□□□ -1.25
UPS3YDR185C GLY1P37303 387 aaKnown RBP7.22□□□□□ -1.25
UPS3YDR185C ALA1P40825 983 aaKnown RBP7.22□□□□□ -1.25
UPS3YDR185C FOX2Q02207 900 aaKnown RBP7.22□□□□□ -1.25
UPS3YDR185C ESF1Q06344 628 aaKnown RBP7.22□□□□□ -1.25
UPS3YDR185C RPB10P22139 70 aa7.21□□□□□ -1.26
UPS3YDR185C AHP1P38013 176 aaKnown RBP7.21□□□□□ -1.26
UPS3YDR185C DAK2P43550 591 aa7.21□□□□□ -1.26
UPS3YDR185C RTS3P53289 263 aa7.21□□□□□ -1.26
UPS3YDR185C ALG12P53730 551 aa7.21□□□□□ -1.26
UPS3YDR185C CDC19P00549 500 aaKnown RBP7.2□□□□□ -1.26
UPS3YDR185C CIT2P08679 460 aa7.2□□□□□ -1.26
UPS3YDR185C SCD5P34758 872 aa7.2□□□□□ -1.26
UPS3YDR185C YJR008WP47085 338 aa7.2□□□□□ -1.26
UPS3YDR185C NSE3Q05541 303 aa7.2□□□□□ -1.26
UPS3YDR185C LCB5Q06147 687 aaKnown RBP7.2□□□□□ -1.26
UPS3YDR185C MLF3P32047 452 aa7.19□□□□□ -1.26
UPS3YDR185C IRE1P32361 1115 aa7.19□□□□□ -1.26
UPS3YDR185C YDR444WQ04093 687 aa7.19□□□□□ -1.26
UPS3YDR185C YLR346CQ06139 101 aa7.19□□□□□ -1.26
UPS3YDR185C UTP4Q06679 776 aaKnown RBP7.19□□□□□ -1.26
UPS3YDR185C TY1A-BLQ12266 440 aa7.19□□□□□ -1.26
UPS3YDR185C Q0182Q9ZZW1 134 aa7.19□□□□□ -1.26
UPS3YDR185C STI1P15705 589 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
UPS3YDR185C PET112P33893 541 aa7.18□□□□□ -1.26
UPS3YDR185C RPS26AP39938 119 aaKnown RBP7.18□□□□□ -1.26
UPS3YDR185C RPS26BP39939 119 aaKnown RBP7.18□□□□□ -1.26
UPS3YDR185C UBP2Q01476 1272 aa7.18□□□□□ -1.26
UPS3YDR185C CDC53Q12018 815 aaKnown RBP7.18□□□□□ -1.26
UPS3YDR185C APC11Q12157 165 aa7.18□□□□□ -1.26
UPS3YDR185C PSH1Q12161 406 aa7.18□□□□□ -1.26
UPS3YDR185C MRPL33P20084 86 aa7.17□□□□□ -1.26
UPS3YDR185C PDC6P26263 563 aaKnown RBP7.17□□□□□ -1.26
UPS3YDR185C NUG1P40010 520 aaKnown RBP7.17□□□□□ -1.26
UPS3YDR185C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
UPS3YDR185C RPN4Q03465 531 aa7.17□□□□□ -1.26
UPS3YDR185C YOR131CQ12486 218 aa7.17□□□□□ -1.26
UPS3YDR185C TSR4P25040 408 aa7.16□□□□□ -1.26
UPS3YDR185C KTR2P33550 425 aa7.16□□□□□ -1.26
UPS3YDR185C VPS35P34110 944 aa7.16□□□□□ -1.26
UPS3YDR185C MNR2P35724 969 aa7.16□□□□□ -1.26
UPS3YDR185C ATG36P46983 293 aa7.16□□□□□ -1.26
UPS3YDR185C UBP15P50101 1230 aa7.16□□□□□ -1.26
UPS3YDR185C SCW11P53189 542 aa7.16□□□□□ -1.26
UPS3YDR185C YGR122WP53272 402 aa7.16□□□□□ -1.26
UPS3YDR185C CWC24P53769 259 aa7.16□□□□□ -1.26
UPS3YDR185C POB3Q04636 552 aaKnown RBP7.16□□□□□ -1.26
UPS3YDR185C OXR1Q08952 273 aa7.16□□□□□ -1.26
UPS3YDR185C PBP2P38151 413 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
UPS3YDR185C OSH7P38755 437 aa7.15□□□□□ -1.26
UPS3YDR185C SAM37P50110 327 aa7.15□□□□□ -1.26
UPS3YDR185C SUT1P53032 299 aaKnown RBP7.15□□□□□ -1.26
UPS3YDR185C CDC55Q00362 526 aa7.15□□□□□ -1.26
UPS3YDR185C LEU1P07264 779 aaKnown RBP7.14□□□□□ -1.27
UPS3YDR185C CIC1P38779 376 aaKnown RBP7.14□□□□□ -1.27
UPS3YDR185C NAM8Q00539 523 aaKnown RBP7.14□□□□□ -1.27
UPS3YDR185C CYC8P14922 966 aa7.13□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms