RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	UTP4	Q06679	776 aa	Known RBP	7.86	□□□□□ -1.15
RPN5	YDL147W	MCM2	P29469	868 aa		7.85	□□□□□ -1.15
RPN5	YDL147W	YTA6	P40328	754 aa		7.85	□□□□□ -1.15
RPN5	YDL147W	YTA7	P40340	1379 aa		7.85	□□□□□ -1.15
RPN5	YDL147W	FYV10	P40492	516 aa		7.85	□□□□□ -1.15
RPN5	YDL147W	MAD1	P40957	749 aa		7.85	□□□□□ -1.15
RPN5	YDL147W	CLA4	P48562	842 aa		7.85	□□□□□ -1.15
RPN5	YDL147W	RMD1	Q03441	430 aa		7.85	□□□□□ -1.15
RPN5	YDL147W	NOC3	Q07896	663 aa	Predicted RBP	7.84	□□□□□ -1.15
RPN5	YDL147W	ARG82	P07250	355 aa		7.83	□□□□□ -1.16
RPN5	YDL147W	OCA5	P38738	679 aa		7.83	□□□□□ -1.16
RPN5	YDL147W	RAD55	P38953	406 aa		7.83	□□□□□ -1.16
RPN5	YDL147W	RSC4	Q02206	625 aa		7.83	□□□□□ -1.16
RPN5	YDL147W	BSC2	Q05611	235 aa		7.83	□□□□□ -1.16
RPN5	YDL147W	HST3	P53687	447 aa		7.82	□□□□□ -1.16
RPN5	YDL147W	SPR28	Q04921	423 aa		7.82	□□□□□ -1.16
RPN5	YDL147W	CLN2	P20438	545 aa		7.81	□□□□□ -1.16
RPN5	YDL147W	MLF3	P32047	452 aa		7.81	□□□□□ -1.16
RPN5	YDL147W	KTR2	P33550	425 aa		7.81	□□□□□ -1.16
RPN5	YDL147W	RPS26A	P39938	119 aa	Known RBP	7.81	□□□□□ -1.16
RPN5	YDL147W	RPS26B	P39939	119 aa	Known RBP	7.81	□□□□□ -1.16
RPN5	YDL147W	QDR2	P40474	542 aa		7.81	□□□□□ -1.16
RPN5	YDL147W	MET32	Q12041	191 aa		7.81	□□□□□ -1.16
RPN5	YDL147W	GAR1	P28007	205 aa	Known RBP	7.8	□□□□□ -1.16
RPN5	YDL147W	SSN3	P39073	555 aa		7.8	□□□□□ -1.16
RPN5	YDL147W	ESF1	Q06344	628 aa	Known RBP	7.8	□□□□□ -1.16
RPN5	YDL147W	MAG2	Q06436	670 aa	Known RBP	7.8	□□□□□ -1.16
RPN5	YDL147W	AHP1	P38013	176 aa	Known RBP	7.79	□□□□□ -1.16
RPN5	YDL147W	NTA1	P40354	457 aa		7.79	□□□□□ -1.16
RPN5	YDL147W	MSB3	P48566	633 aa	Predicted RBP	7.79	□□□□□ -1.16
RPN5	YDL147W	MSN5	P52918	1224 aa		7.79	□□□□□ -1.16
RPN5	YDL147W	YGR122W	P53272	402 aa		7.79	□□□□□ -1.16
RPN5	YDL147W	YNL165W	P53891	406 aa		7.79	□□□□□ -1.16
RPN5	YDL147W	GCR2	Q01722	534 aa		7.79	□□□□□ -1.16
RPN5	YDL147W	MSN1	P22148	382 aa		7.78	□□□□□ -1.16
RPN5	YDL147W	KAP122	P32767	1081 aa		7.78	□□□□□ -1.16
RPN5	YDL147W	IRS4	P36115	615 aa	Known RBP	7.78	□□□□□ -1.16
RPN5	YDL147W	JJJ2	P46997	583 aa		7.78	□□□□□ -1.16
RPN5	YDL147W	SRF1	Q12516	437 aa		7.78	□□□□□ -1.16
RPN5	YDL147W	AAD14	P42884	376 aa		7.78	□□□□□ -1.16
RPN5	YDL147W	CDC4	P07834	779 aa		7.77	□□□□□ -1.17
RPN5	YDL147W	AFT1	P22149	690 aa		7.77	□□□□□ -1.17
RPN5	YDL147W	IRE1	P32361	1115 aa		7.77	□□□□□ -1.17
RPN5	YDL147W	ASH1	P34233	588 aa		7.77	□□□□□ -1.17
RPN5	YDL147W	ISW1	P38144	1129 aa		7.77	□□□□□ -1.17
RPN5	YDL147W	PSY2	P40164	858 aa		7.77	□□□□□ -1.17
RPN5	YDL147W	RGD2	P43556	714 aa		7.77	□□□□□ -1.17
RPN5	YDL147W	MTO1	P53070	669 aa		7.77	□□□□□ -1.17
RPN5	YDL147W	FPR4	Q06205	392 aa	Predicted RBP	7.77	□□□□□ -1.17
RPN5	YDL147W	PET112	P33893	541 aa		7.76	□□□□□ -1.17
RPN5	YDL147W	YHL008C	P38750	627 aa		7.76	□□□□□ -1.17
RPN5	YDL147W	VAC8	P39968	578 aa		7.76	□□□□□ -1.17
RPN5	YDL147W	ALD6	P54115	500 aa	Known RBP	7.76	□□□□□ -1.17
RPN5	YDL147W	INP54	Q08227	384 aa	Known RBP	7.76	□□□□□ -1.17
RPN5	YDL147W	PIN2	Q12057	282 aa		7.76	□□□□□ -1.17
RPN5	YDL147W	CYC8	P14922	966 aa		7.75	□□□□□ -1.17
RPN5	YDL147W	MNR2	P35724	969 aa		7.75	□□□□□ -1.17
RPN5	YDL147W	GIP1	P38229	639 aa		7.75	□□□□□ -1.17
RPN5	YDL147W	ECM2	P38241	364 aa	Known RBP	7.75	□□□□□ -1.17
RPN5	YDL147W	CWC24	P53769	259 aa		7.75	□□□□□ -1.17
RPN5	YDL147W	VPS16	Q03308	798 aa		7.75	□□□□□ -1.17
RPN5	YDL147W	WRS1	Q12109	432 aa	Known RBP	7.75	□□□□□ -1.17
RPN5	YDL147W	TIF6	Q12522	245 aa	Known RBP	7.75	□□□□□ -1.17
RPN5	YDL147W	RAD2	P07276	1031 aa		7.74	□□□□□ -1.17
RPN5	YDL147W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.74	□□□□□ -1.17	not detected
RPN5	YDL147W	MRPS18	P42847	217 aa		7.74	□□□□□ -1.17
RPN5	YDL147W	DAL4	Q04895	635 aa		7.74	□□□□□ -1.17
RPN5	YDL147W	YCS4	Q06156	1176 aa		7.74	□□□□□ -1.17
RPN5	YDL147W	RPS31	P05759	152 aa	Known RBP	7.73	□□□□□ -1.17
RPN5	YDL147W	KAR2	P16474	682 aa	Known RBP	7.73	□□□□□ -1.17
RPN5	YDL147W	YOL098C	Q12496	1037 aa		7.73	□□□□□ -1.17
RPN5	YDL147W	DAL1	P32375	460 aa		7.72	□□□□□ -1.17
RPN5	YDL147W	SHM1	P37292	490 aa	Predicted RBP	7.72	□□□□□ -1.17
RPN5	YDL147W	AIM46	P38885	310 aa		7.72	□□□□□ -1.17
RPN5	YDL147W	ALD3	P54114	506 aa		7.72	□□□□□ -1.17
RPN5	YDL147W	YOR296W	Q08748	1289 aa		7.72	□□□□□ -1.17
RPN5	YDL147W	MCD1	Q12158	566 aa		7.72	□□□□□ -1.17
RPN5	YDL147W	HXK1	P04806	485 aa	Known RBP	7.71	□□□□□ -1.18
RPN5	YDL147W	PTK2	P47116	818 aa	Known RBP	7.71	□□□□□ -1.18
RPN5	YDL147W	FLP1	P03870	423 aa		7.7	□□□□□ -1.18
RPN5	YDL147W	DLD1	P32891	587 aa		7.7	□□□□□ -1.18
RPN5	YDL147W	RPC31	P17890	251 aa		7.69	□□□□□ -1.18
RPN5	YDL147W	PRE9	P23638	258 aa	Known RBP	7.69	□□□□□ -1.18
RPN5	YDL147W	BSD2	P38356	321 aa		7.69	□□□□□ -1.18
RPN5	YDL147W	FAA3	P39002	694 aa		7.69	□□□□□ -1.18
RPN5	YDL147W	LSC2	P53312	427 aa		7.69	□□□□□ -1.18
RPN5	YDL147W	PDC6	P26263	563 aa	Known RBP	7.68	□□□□□ -1.18
RPN5	YDL147W	SRP40	P32583	406 aa	Predicted RBP	7.68	□□□□□ -1.18
RPN5	YDL147W	PRP40	P33203	583 aa	Known RBP	7.68	□□□□□ -1.18
RPN5	YDL147W	VTC4	P47075	721 aa		7.68	□□□□□ -1.18
RPN5	YDL147W	TOS4	Q06266	489 aa		7.68	□□□□□ -1.18
RPN5	YDL147W	LEU1	P07264	779 aa	Known RBP	7.67	□□□□□ -1.18
RPN5	YDL147W	MET22	P32179	357 aa		7.67	□□□□□ -1.18
RPN5	YDL147W	SLA1	P32790	1244 aa		7.67	□□□□□ -1.18
RPN5	YDL147W	BRN1	P38170	754 aa		7.67	□□□□□ -1.18
RPN5	YDL147W	NUP85	P46673	744 aa		7.67	□□□□□ -1.18
RPN5	YDL147W	PSH1	Q12161	406 aa		7.67	□□□□□ -1.18
RPN5	YDL147W	YJL049W	P47048	450 aa		7.66	□□□□□ -1.18
RPN5	YDL147W	YJR115W	P47152	169 aa		7.66	□□□□□ -1.18
RPN5	YDL147W	CUS1	Q02554	436 aa	Predicted RBP	7.65	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms