RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeast

Gene SRD1, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRD1	YCR018C	AVT1	P47082	602 aa		4.97	□□□□□ -1.61
SRD1	YCR018C	ALD2	P47771	506 aa		4.97	□□□□□ -1.61
SRD1	YCR018C	YPQ2	Q06328	317 aa		4.97	□□□□□ -1.61
SRD1	YCR018C	HAT1	Q12341	374 aa		4.97	□□□□□ -1.61
SRD1	YCR018C	PDI1	P17967	522 aa	Known RBP	4.96	□□□□□ -1.62
SRD1	YCR018C	ALG14	P38242	237 aa		4.96	□□□□□ -1.62
SRD1	YCR018C	YFL034W	P43564	1073 aa		4.96	□□□□□ -1.62
SRD1	YCR018C	NOP8	Q08287	484 aa	Predicted RBP	4.96	□□□□□ -1.62
SRD1	YCR018C	TSC13	Q99190	310 aa		4.96	□□□□□ -1.62
SRD1	YCR018C	RPP1A	P05318	106 aa	Predicted RBP	4.95	□□□□□ -1.62
SRD1	YCR018C	RGP1	P16664	663 aa		4.95	□□□□□ -1.62
SRD1	YCR018C	ACS2	P52910	683 aa	Known RBP	4.95	□□□□□ -1.62
SRD1	YCR018C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
SRD1	YCR018C	PUF6	Q04373	656 aa	Known RBP	4.94	□□□□□ -1.62
SRD1	YCR018C	GAS4	Q08271	471 aa		4.94	□□□□□ -1.62
SRD1	YCR018C	SWI5	P08153	709 aa		4.93	□□□□□ -1.62
SRD1	YCR018C	VAN1	P23642	535 aa		4.93	□□□□□ -1.62
SRD1	YCR018C	YNL165W	P53891	406 aa		4.93	□□□□□ -1.62
SRD1	YCR018C	PGM1	P33401	570 aa	Known RBP	4.92	□□□□□ -1.62
SRD1	YCR018C	SSF1	P38789	453 aa	Predicted RBP	4.92	□□□□□ -1.62
SRD1	YCR018C	AIM9	P40053	627 aa	Known RBP	4.92	□□□□□ -1.62
SRD1	YCR018C	ROM1	P53046	1155 aa		4.92	□□□□□ -1.62
SRD1	YCR018C	KAR5	Q04746	504 aa		4.92	□□□□□ -1.62
SRD1	YCR018C	AI3	P03877	415 aa		4.91	□□□□□ -1.62
SRD1	YCR018C	NTH2	P35172	780 aa		4.91	□□□□□ -1.62
SRD1	YCR018C	PRK1	P40494	810 aa		4.91	□□□□□ -1.62
SRD1	YCR018C	PUN1	Q06991	263 aa		4.91	□□□□□ -1.62
SRD1	YCR018C	GAS5	Q08193	484 aa		4.91	□□□□□ -1.62
SRD1	YCR018C	TRS33	Q99394	268 aa		4.91	□□□□□ -1.62
SRD1	YCR018C	NAR1	P23503	491 aa	Known RBP	4.9	□□□□□ -1.63
SRD1	YCR018C	YTA6	P40328	754 aa		4.9	□□□□□ -1.63
SRD1	YCR018C	CWH41	P53008	833 aa		4.9	□□□□□ -1.63
SRD1	YCR018C	HEH2	Q03281	663 aa		4.9	□□□□□ -1.63
SRD1	YCR018C	CWC15	Q03772	175 aa	Known RBP	4.9	□□□□□ -1.63
SRD1	YCR018C	SRS2	P12954	1174 aa		4.89	□□□□□ -1.63
SRD1	YCR018C	SAC7	P17121	654 aa		4.89	□□□□□ -1.63
SRD1	YCR018C	PNP1	Q05788	311 aa		4.89	□□□□□ -1.63
SRD1	YCR018C	YBL113C	Q7M4S9	792 aa		4.89	□□□□□ -1.63
SRD1	YCR018C	TRP3	P00937	484 aa		4.88	□□□□□ -1.63
SRD1	YCR018C	FUR4	P05316	633 aa	Known RBP	4.88	□□□□□ -1.63
SRD1	YCR018C	CYT1	P07143	309 aa		4.88	□□□□□ -1.63
SRD1	YCR018C	RPS6A	P0CX37	236 aa	Known RBP	4.88	□□□□□ -1.63
SRD1	YCR018C	RPS6B	P0CX38	236 aa	Predicted RBP	4.88	□□□□□ -1.63
SRD1	YCR018C	GIS4	Q04233	774 aa		4.88	□□□□□ -1.63
SRD1	YCR018C	MLF3	P32047	452 aa		4.87	□□□□□ -1.63
SRD1	YCR018C	RRN6	P32786	894 aa		4.87	□□□□□ -1.63
SRD1	YCR018C	YKR073C	P36153	106 aa		4.87	□□□□□ -1.63
SRD1	YCR018C	STM1	P39015	273 aa	Known RBP	4.87	□□□□□ -1.63
SRD1	YCR018C	ARI1	P53111	347 aa	Known RBP	4.87	□□□□□ -1.63
SRD1	YCR018C	MED7	Q08278	222 aa		4.87	□□□□□ -1.63
SRD1	YCR018C	MCM1	P11746	286 aa		4.86	□□□□□ -1.63
SRD1	YCR018C	RRM3	P38766	723 aa		4.86	□□□□□ -1.63
SRD1	YCR018C	ERP5	P38819	212 aa		4.86	□□□□□ -1.63
SRD1	YCR018C	HEM3	P28789	327 aa		4.85	□□□□□ -1.63
SRD1	YCR018C	SEC20	P28791	383 aa		4.85	□□□□□ -1.63
SRD1	YCR018C	GRS1	P38088	690 aa	Known RBP	4.85	□□□□□ -1.63
SRD1	YCR018C	Q0182	Q9ZZW1	134 aa		4.85	□□□□□ -1.63
SRD1	YCR018C	COQ2	P32378	372 aa		4.84	□□□□□ -1.63
SRD1	YCR018C	LIP5	P32875	414 aa		4.84	□□□□□ -1.63
SRD1	YCR018C	KAE1	P36132	386 aa		4.84	□□□□□ -1.63
SRD1	YCR018C	ALD4	P46367	519 aa	Known RBP	4.84	□□□□□ -1.63
SRD1	YCR018C	AOS1	Q06624	347 aa		4.84	□□□□□ -1.63
SRD1	YCR018C	UBP1	P25037	809 aa		4.83	□□□□□ -1.64
SRD1	YCR018C	SFA1	P32771	386 aa		4.83	□□□□□ -1.64
SRD1	YCR018C	GLO3	P38682	493 aa	Known RBP	4.83	□□□□□ -1.64
SRD1	YCR018C	SEN54	Q02825	467 aa	Predicted RBP	4.83	□□□□□ -1.64
SRD1	YCR018C	YLR122C	Q12312	125 aa		4.83	□□□□□ -1.64
SRD1	YCR018C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
SRD1	YCR018C	NGR1	P32831	672 aa	Known RBP	4.82	□□□□□ -1.64
SRD1	YCR018C	NCL1	P38205	684 aa	Known RBP	4.82	□□□□□ -1.64
SRD1	YCR018C	BOL3	P39724	118 aa		4.82	□□□□□ -1.64
SRD1	YCR018C	CTH1	P47976	325 aa		4.82	□□□□□ -1.64
SRD1	YCR018C	MTO1	P53070	669 aa		4.82	□□□□□ -1.64
SRD1	YCR018C	ATG1	P53104	897 aa		4.82	□□□□□ -1.64
SRD1	YCR018C	TOS1	P38288	455 aa		4.81	□□□□□ -1.64
SRD1	YCR018C	YHL050C	P38721	697 aa		4.81	□□□□□ -1.64
SRD1	YCR018C	YHR219W	P38900	624 aa		4.81	□□□□□ -1.64
SRD1	YCR018C	IPL1	P38991	367 aa		4.81	□□□□□ -1.64
SRD1	YCR018C	QDR1	P40475	563 aa		4.81	□□□□□ -1.64
SRD1	YCR018C	MSC6	Q08818	692 aa	Known RBP	4.81	□□□□□ -1.64
SRD1	YCR018C	TRL1	P09880	827 aa	Known RBP	4.8	□□□□□ -1.64
SRD1	YCR018C	SUV3	P32580	737 aa		4.8	□□□□□ -1.64
SRD1	YCR018C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	RIP-Chip
SRD1	YCR018C	ELM1	P32801	640 aa		4.8	□□□□□ -1.64
SRD1	YCR018C	THI12	P42883	340 aa		4.8	□□□□□ -1.64
SRD1	YCR018C	THI5	P43534	340 aa		4.8	□□□□□ -1.64
SRD1	YCR018C	THI11	P47183	340 aa		4.8	□□□□□ -1.64
SRD1	YCR018C	SKP1	P52286	194 aa		4.8	□□□□□ -1.64
SRD1	YCR018C	FOX2	Q02207	900 aa	Known RBP	4.8	□□□□□ -1.64
SRD1	YCR018C	THI13	Q07748	340 aa		4.8	□□□□□ -1.64
SRD1	YCR018C	ASF1	P32447	279 aa		4.79	□□□□□ -1.64
SRD1	YCR018C	MDJ2	P42834	146 aa		4.79	□□□□□ -1.64
SRD1	YCR018C	ACF4	P47129	309 aa		4.79	□□□□□ -1.64
SRD1	YCR018C	SNU71	P53207	620 aa	Known RBP	4.79	□□□□□ -1.64
SRD1	YCR018C	ISC10	P32645	267 aa		4.78	□□□□□ -1.64
SRD1	YCR018C	YBR197C	P38306	217 aa		4.78	□□□□□ -1.64
SRD1	YCR018C	NOP7	P53261	605 aa	Known RBP	4.78	□□□□□ -1.64
SRD1	YCR018C	BRE4	Q07660	1125 aa		4.78	□□□□□ -1.64
SRD1	YCR018C	LSO1	Q3E827	93 aa		4.78	□□□□□ -1.64
SRD1	YCR018C	YNR040W	P53736	256 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms