RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	DPH6	Q12429	685 aa		7.02	□□□□□ -1.29
APA1	YCL050C	BOL3	P39724	118 aa		7.01	□□□□□ -1.29
APA1	YCL050C	SYT1	Q06836	1226 aa		7.01	□□□□□ -1.29
APA1	YCL050C	CUS1	Q02554	436 aa	Predicted RBP	7	□□□□□ -1.29
APA1	YCL050C	NCL1	P38205	684 aa	Known RBP	6.99	□□□□□ -1.29
APA1	YCL050C	GLO3	P38682	493 aa	Known RBP	6.99	□□□□□ -1.29
APA1	YCL050C	JJJ3	P47138	172 aa		6.99	□□□□□ -1.29
APA1	YCL050C	HAT1	Q12341	374 aa		6.99	□□□□□ -1.29
APA1	YCL050C	LSO1	Q3E827	93 aa		6.99	□□□□□ -1.29
APA1	YCL050C	RPC31	P17890	251 aa		6.98	□□□□□ -1.29
APA1	YCL050C	TRK2	P28584	889 aa		6.98	□□□□□ -1.29
APA1	YCL050C	SKP1	P52286	194 aa		6.98	□□□□□ -1.29
APA1	YCL050C	SUT1	P53032	299 aa	Known RBP	6.98	□□□□□ -1.29
APA1	YCL050C	APM2	P38700	605 aa		6.97	□□□□□ -1.29
APA1	YCL050C	FIR1	P40020	876 aa		6.97	□□□□□ -1.29
APA1	YCL050C	BOI1	P38041	980 aa	Known RBP	6.96	□□□□□ -1.3
APA1	YCL050C	GIP1	P38229	639 aa		6.96	□□□□□ -1.3
APA1	YCL050C	YBR287W	P38355	427 aa		6.96	□□□□□ -1.3
APA1	YCL050C	HXT8	P40886	569 aa		6.96	□□□□□ -1.3
APA1	YCL050C	YOR296W	Q08748	1289 aa		6.96	□□□□□ -1.3
APA1	YCL050C	ISW1	P38144	1129 aa		6.95	□□□□□ -1.3
APA1	YCL050C	QDR1	P40475	563 aa		6.95	□□□□□ -1.3
APA1	YCL050C	HEH2	Q03281	663 aa		6.95	□□□□□ -1.3
APA1	YCL050C	RPB10	P22139	70 aa		6.94	□□□□□ -1.3
APA1	YCL050C	BSD2	P38356	321 aa		6.94	□□□□□ -1.3
APA1	YCL050C	ATG1	P53104	897 aa		6.94	□□□□□ -1.3
APA1	YCL050C	APC11	Q12157	165 aa		6.94	□□□□□ -1.3
APA1	YCL050C	MSN1	P22148	382 aa		6.93	□□□□□ -1.3
APA1	YCL050C	TY1A-DR2	Q03964	440 aa	Known RBP	6.93	□□□□□ -1.3
APA1	YCL050C	YBL113C	Q7M4S9	792 aa		6.93	□□□□□ -1.3
APA1	YCL050C	GRS1	P38088	690 aa	Known RBP	6.92	□□□□□ -1.3
APA1	YCL050C	YNR040W	P53736	256 aa		6.92	□□□□□ -1.3
APA1	YCL050C	SMC1	P32908	1225 aa		6.91	□□□□□ -1.3
APA1	YCL050C	MSC7	P38694	644 aa		6.91	□□□□□ -1.3
APA1	YCL050C	ERP5	P38819	212 aa		6.91	□□□□□ -1.3
APA1	YCL050C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	6.9	□□□□□ -1.3	not detected
APA1	YCL050C	ACF4	P47129	309 aa		6.9	□□□□□ -1.3
APA1	YCL050C	ITC1	P53125	1264 aa		6.9	□□□□□ -1.3
APA1	YCL050C	GPM1	P00950	247 aa	Known RBP	6.89	□□□□□ -1.31
APA1	YCL050C	RAD55	P38953	406 aa		6.89	□□□□□ -1.31
APA1	YCL050C	AI1	P03875	834 aa		6.88	□□□□□ -1.31
APA1	YCL050C	UFD2	P54860	961 aa		6.88	□□□□□ -1.31
APA1	YCL050C	TRL1	P09880	827 aa	Known RBP	6.87	□□□□□ -1.31
APA1	YCL050C	PDC5	P16467	563 aa	Known RBP	6.87	□□□□□ -1.31
APA1	YCL050C	KNS1	P32350	737 aa	Predicted RBP	6.87	□□□□□ -1.31
APA1	YCL050C	KTR2	P33550	425 aa		6.87	□□□□□ -1.31
APA1	YCL050C	SSF1	P38789	453 aa	Predicted RBP	6.87	□□□□□ -1.31
APA1	YCL050C	AIM46	P38885	310 aa		6.87	□□□□□ -1.31
APA1	YCL050C	NTA1	P40354	457 aa		6.87	□□□□□ -1.31
APA1	YCL050C	YIL165C	P40446	119 aa		6.86	□□□□□ -1.31
APA1	YCL050C	PRK1	P40494	810 aa		6.86	□□□□□ -1.31
APA1	YCL050C	RGD2	P43556	714 aa		6.86	□□□□□ -1.31
APA1	YCL050C	RSC2	Q06488	889 aa		6.86	□□□□□ -1.31
APA1	YCL050C	IDI1	P15496	288 aa		6.85	□□□□□ -1.31
APA1	YCL050C	YER156C	P40093	338 aa	Known RBP	6.85	□□□□□ -1.31
APA1	YCL050C	MDJ2	P42834	146 aa		6.85	□□□□□ -1.31
APA1	YCL050C	IRS4	P36115	615 aa	Known RBP	6.84	□□□□□ -1.31
APA1	YCL050C	PSY2	P40164	858 aa		6.84	□□□□□ -1.31
APA1	YCL050C	YNR014W	P53719	212 aa		6.84	□□□□□ -1.31
APA1	YCL050C	TRS120	Q04183	1289 aa		6.84	□□□□□ -1.31
APA1	YCL050C	EMG1	Q06287	252 aa	Known RBP	6.84	□□□□□ -1.31
APA1	YCL050C	THI72	Q08579	599 aa		6.84	□□□□□ -1.31
APA1	YCL050C	TIF6	Q12522	245 aa	Known RBP	6.84	□□□□□ -1.31
APA1	YCL050C	MET1	P36150	593 aa		6.83	□□□□□ -1.32
APA1	YCL050C	PPT1	P53043	513 aa		6.83	□□□□□ -1.32
APA1	YCL050C	STM1	P39015	273 aa	Known RBP	6.82	□□□□□ -1.32
APA1	YCL050C	YJL181W	P46987	611 aa		6.82	□□□□□ -1.32
APA1	YCL050C	NSG2	P53898	299 aa		6.82	□□□□□ -1.32
APA1	YCL050C	ALG14	P38242	237 aa		6.8	□□□□□ -1.32
APA1	YCL050C	YHL050C	P38721	697 aa		6.8	□□□□□ -1.32
APA1	YCL050C	YHR219W	P38900	624 aa		6.8	□□□□□ -1.32
APA1	YCL050C	BOI2	P39969	1040 aa		6.8	□□□□□ -1.32
APA1	YCL050C	NUT2	Q06213	157 aa		6.8	□□□□□ -1.32
APA1	YCL050C	SLD2	P34252	453 aa		6.79	□□□□□ -1.32
APA1	YCL050C	MDJ1	P35191	511 aa		6.79	□□□□□ -1.32
APA1	YCL050C	SBE2	P42223	864 aa	Known RBP	6.79	□□□□□ -1.32
APA1	YCL050C	YNL011C	P53980	444 aa		6.79	□□□□□ -1.32
APA1	YCL050C	FRT1	Q99332	602 aa		6.79	□□□□□ -1.32
APA1	YCL050C	PGM2	P37012	569 aa	Known RBP	6.78	□□□□□ -1.32
APA1	YCL050C	NHA1	Q99271	985 aa		6.78	□□□□□ -1.32
APA1	YCL050C	MRP10	O75012	95 aa		6.77	□□□□□ -1.33
APA1	YCL050C	ECM2	P38241	364 aa	Known RBP	6.77	□□□□□ -1.33
APA1	YCL050C	YML020W	Q03722	664 aa		6.77	□□□□□ -1.33
APA1	YCL050C	PHM7	Q12252	991 aa		6.77	□□□□□ -1.33
APA1	YCL050C	NAR1	P23503	491 aa	Known RBP	6.76	□□□□□ -1.33
APA1	YCL050C	ICP55	P40051	511 aa		6.76	□□□□□ -1.33
APA1	YCL050C	CDC55	Q00362	526 aa		6.76	□□□□□ -1.33
APA1	YCL050C	RSC4	Q02206	625 aa		6.76	□□□□□ -1.33
APA1	YCL050C	SEC20	P28791	383 aa		6.75	□□□□□ -1.33
APA1	YCL050C	INP51	P40559	946 aa	Known RBP	6.75	□□□□□ -1.33
APA1	YCL050C	THI12	P42883	340 aa		6.75	□□□□□ -1.33
APA1	YCL050C	THI5	P43534	340 aa		6.75	□□□□□ -1.33
APA1	YCL050C	YFL066C	P43538	392 aa		6.75	□□□□□ -1.33
APA1	YCL050C	THI11	P47183	340 aa		6.75	□□□□□ -1.33
APA1	YCL050C	GIS4	Q04233	774 aa		6.75	□□□□□ -1.33
APA1	YCL050C	BSC2	Q05611	235 aa		6.75	□□□□□ -1.33
APA1	YCL050C	TDA6	Q06466	467 aa		6.75	□□□□□ -1.33
APA1	YCL050C	THI13	Q07748	340 aa		6.75	□□□□□ -1.33
APA1	YCL050C	PUS1	Q12211	544 aa	Known RBP	6.75	□□□□□ -1.33
APA1	YCL050C	FUS1	P11710	512 aa		6.74	□□□□□ -1.33

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms