RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W PSK2Q08217 1101 aa8.16□□□□□ -1.1
TOD6YBL054W TFC8Q12308 588 aa8.16□□□□□ -1.1
TOD6YBL054W FKS3Q04952 1785 aa8.16□□□□□ -1.1
TOD6YBL054W RAD4P14736 754 aa8.15□□□□□ -1.1
TOD6YBL054W MAL33P38157 468 aa8.15□□□□□ -1.1
TOD6YBL054W MSH4P40965 878 aaPredicted RBP8.15□□□□□ -1.1
TOD6YBL054W TFG2P41896 400 aaPredicted RBP8.15□□□□□ -1.1
TOD6YBL054W RRB1Q04225 511 aaKnown RBP8.15□□□□□ -1.1
TOD6YBL054W GYL1Q04322 720 aa8.15□□□□□ -1.1
TOD6YBL054W STE11P23561 717 aa8.14□□□□□ -1.11
TOD6YBL054W GSY2P27472 705 aa8.14□□□□□ -1.11
TOD6YBL054W SRP40P32583 406 aaPredicted RBP8.14□□□□□ -1.11
TOD6YBL054W SIC1P38634 284 aa8.14□□□□□ -1.11
TOD6YBL054W NOC2P39744 710 aaKnown RBP8.14□□□□□ -1.11
TOD6YBL054W PRP3Q03338 469 aaPredicted RBP8.14□□□□□ -1.11
TOD6YBL054W YCG1Q06680 1035 aa8.14□□□□□ -1.11
TOD6YBL054W BNI1P41832 1953 aa8.14□□□□□ -1.11
TOD6YBL054W VID28P40547 921 aa8.14□□□□□ -1.11
TOD6YBL054W RBA50Q04418 439 aa8.14□□□□□ -1.11
TOD6YBL054W APL4Q12028 832 aa8.14□□□□□ -1.11
TOD6YBL054W SWI1P09547 1314 aa8.13□□□□□ -1.11
TOD6YBL054W NUP133P36161 1157 aa8.13□□□□□ -1.11
TOD6YBL054W YHL017WP38745 532 aa8.13□□□□□ -1.11
TOD6YBL054W MLC1P53141 149 aa8.13□□□□□ -1.11
TOD6YBL054W CTF4Q01454 927 aa8.13□□□□□ -1.11
TOD6YBL054W MCM16Q12262 181 aa8.13□□□□□ -1.11
TOD6YBL054W CDC15P27636 974 aa8.12□□□□□ -1.11
TOD6YBL054W SLD2P34252 453 aa8.12□□□□□ -1.11
TOD6YBL054W PCH2P38126 564 aa8.12□□□□□ -1.11
TOD6YBL054W APT1P49435 187 aaKnown RBP8.12□□□□□ -1.11
TOD6YBL054W YGL242CP53066 181 aa8.12□□□□□ -1.11
TOD6YBL054W UBC1P21734 215 aaKnown RBP8.11□□□□□ -1.11
TOD6YBL054W MSH3P25336 1018 aa8.11□□□□□ -1.11
TOD6YBL054W KCC4P25389 1037 aa8.11□□□□□ -1.11
TOD6YBL054W KTR1P27810 393 aaKnown RBP8.11□□□□□ -1.11
TOD6YBL054W PSE1P32337 1089 aaKnown RBP8.11□□□□□ -1.11
TOD6YBL054W RFC5P38251 354 aa8.11□□□□□ -1.11
TOD6YBL054W SSF1P38789 453 aaPredicted RBP8.11□□□□□ -1.11
TOD6YBL054W VPS75P53853 264 aa8.11□□□□□ -1.11
TOD6YBL054W RRP1P35178 278 aaPredicted RBP8.1□□□□□ -1.11
TOD6YBL054W SWH1P35845 1188 aa8.1□□□□□ -1.11
TOD6YBL054W YKT6P36015 200 aaKnown RBP8.1□□□□□ -1.11
TOD6YBL054W REI1P38344 393 aaPredicted RBP8.1□□□□□ -1.11
TOD6YBL054W STM1P39015 273 aaKnown RBP8.1□□□□□ -1.11
TOD6YBL054W UBP10P53874 792 aaPredicted RBP8.1□□□□□ -1.11
TOD6YBL054W ALO1P54783 526 aaKnown RBP8.1□□□□□ -1.11
TOD6YBL054W DPB3P27344 201 aa8.1□□□□□ -1.11
TOD6YBL054W RIM101P33400 625 aa8.1□□□□□ -1.11
TOD6YBL054W PSY4P38193 441 aa8.1□□□□□ -1.11
TOD6YBL054W RGD1P38339 666 aa8.1□□□□□ -1.11
TOD6YBL054W CIC1P38779 376 aaKnown RBP8.1□□□□□ -1.11
TOD6YBL054W CAJ1P39101 391 aa8.1□□□□□ -1.11
TOD6YBL054W BUD6P41697 788 aa8.1□□□□□ -1.11
TOD6YBL054W STR2P47164 639 aa8.1□□□□□ -1.11
TOD6YBL054W YKE2P52553 114 aa8.1□□□□□ -1.11
TOD6YBL054W ZDS2P54786 942 aa8.1□□□□□ -1.11
TOD6YBL054W OMS1Q06668 471 aa8.1□□□□□ -1.11
TOD6YBL054W YPL225WQ08971 146 aaKnown RBP8.1□□□□□ -1.11
TOD6YBL054W PGA3Q12746 312 aaKnown RBP8.1□□□□□ -1.11
TOD6YBL054W MATALPHA2P0CY08 210 aa8.09□□□□□ -1.11
TOD6YBL054W HMLALPHA2P0CY09 210 aa8.09□□□□□ -1.11
TOD6YBL054W KTR3P38130 404 aaPredicted RBP8.09□□□□□ -1.11
TOD6YBL054W RFT1P38206 574 aaPredicted RBP8.09□□□□□ -1.11
TOD6YBL054W CCT4P39078 528 aaKnown RBP8.09□□□□□ -1.11
TOD6YBL054W NDC80P40460 691 aa8.09□□□□□ -1.11
TOD6YBL054W CST6P40535 587 aa8.09□□□□□ -1.11
TOD6YBL054W CTK3P46963 296 aaPredicted RBP8.09□□□□□ -1.11
TOD6YBL054W YNL035CP53962 389 aaKnown RBP8.09□□□□□ -1.11
TOD6YBL054W DNM1P54861 757 aa8.09□□□□□ -1.11
TOD6YBL054W SRP54P20424 541 aaKnown RBP8.08□□□□□ -1.12
TOD6YBL054W RRP43P25359 394 aaPredicted RBP8.08□□□□□ -1.12
TOD6YBL054W BYE1P36106 594 aa8.08□□□□□ -1.12
TOD6YBL054W SAP1P39955 897 aaKnown RBP8.08□□□□□ -1.12
TOD6YBL054W MAL13P53338 473 aa8.08□□□□□ -1.12
TOD6YBL054W RPO26P20435 155 aa8.07□□□□□ -1.12
TOD6YBL054W UBP12P39538 1254 aa8.07□□□□□ -1.12
TOD6YBL054W CAF130P53280 1122 aaPredicted RBP8.07□□□□□ -1.12
TOD6YBL054W ITT1Q04638 464 aa8.07□□□□□ -1.12
TOD6YBL054W ATG23Q06671 453 aa8.07□□□□□ -1.12
TOD6YBL054W TMA16Q08687 178 aa8.07□□□□□ -1.12
TOD6YBL054W ISW2Q08773 1120 aa8.07□□□□□ -1.12
TOD6YBL054W FBP26P32604 452 aa8.06□□□□□ -1.12
TOD6YBL054W YEL043WP32618 956 aa8.06□□□□□ -1.12
TOD6YBL054W PIB2P53191 635 aa8.06□□□□□ -1.12
TOD6YBL054W PUS1Q12211 544 aaKnown RBP8.06□□□□□ -1.12
TOD6YBL054W PHO13P19881 312 aa8.05□□□□□ -1.12
TOD6YBL054W SWI3P32591 825 aa8.05□□□□□ -1.12
TOD6YBL054W YLR407WQ06070 228 aa8.05□□□□□ -1.12
TOD6YBL054W PDC1P06169 563 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W LPD1P09624 499 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W PGI1P12709 554 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W MCM4P30665 933 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W STO1P34160 861 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W MIF2P35201 549 aa8.05□□□□□ -1.12
TOD6YBL054W DEF1P35732 738 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W MUD2P36084 527 aaKnown RBP8.05□□□□□ -1.12
TOD6YBL054W SEC9P40357 651 aa8.05□□□□□ -1.12
TOD6YBL054W ALE1Q08548 619 aa8.05□□□□□ -1.12
TOD6YBL054W ATG9Q12142 997 aa8.05□□□□□ -1.12
TOD6YBL054W RUD3Q12234 484 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms