RNA–Protein interactions for RNA: ENST00000514552.5

PDE4D-222, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-222ENST00000514552 ACTN4O43707 911 aaKnown RBP12.39□□□□□ -0.43
PDE4D-222ENST00000514552 PTPN5P54829 565 aa12.39□□□□□ -0.43
PDE4D-222ENST00000514552 SPIRE2Q8WWL2 714 aa12.39□□□□□ -0.43
PDE4D-222ENST00000514552 MMRN1Q13201 1228 aa12.38□□□□□ -0.43
PDE4D-222ENST00000514552 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
PDE4D-222ENST00000514552 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
PDE4D-222ENST00000514552 APLP1P51693 650 aa12.37□□□□□ -0.43
PDE4D-222ENST00000514552 GOPCQ9HD26 462 aa12.36□□□□□ -0.43
PDE4D-222ENST00000514552 HCSTQ9UBK5 93 aa12.36□□□□□ -0.43
PDE4D-222ENST00000514552 WDR97A6NE52 1622 aa12.36□□□□□ -0.43
PDE4D-222ENST00000514552 GRIPAP1Q4V328 841 aa12.35□□□□□ -0.43
PDE4D-222ENST00000514552 SH3D19Q5HYK7 790 aa12.35□□□□□ -0.43
PDE4D-222ENST00000514552 ATP6V1AP38606 617 aa12.34□□□□□ -0.43
PDE4D-222ENST00000514552 FUT2Q10981 343 aa12.34□□□□□ -0.43
PDE4D-222ENST00000514552 MYSM1Q5VVJ2 828 aa12.34□□□□□ -0.43
PDE4D-222ENST00000514552 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
PDE4D-222ENST00000514552 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.43
PDE4D-222ENST00000514552 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.43
PDE4D-222ENST00000514552 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.43
PDE4D-222ENST00000514552 HOXA2O43364 376 aa12.33□□□□□ -0.44
PDE4D-222ENST00000514552 GJA5P36382 358 aa12.32□□□□□ -0.44
PDE4D-222ENST00000514552 SKIV2LQ15477 1246 aaKnown RBP12.32□□□□□ -0.44
PDE4D-222ENST00000514552 ARHGEF11O15085 1522 aa12.32□□□□□ -0.44
PDE4D-222ENST00000514552 PCDHB3Q9Y5E6 796 aa12.31□□□□□ -0.44
PDE4D-222ENST00000514552 MOXD2PA6NHM9 499 aa12.3□□□□□ -0.44
PDE4D-222ENST00000514552 SPTLC1O15269 473 aa12.29□□□□□ -0.44
PDE4D-222ENST00000514552 MORN1Q5T089 497 aa12.29□□□□□ -0.44
PDE4D-222ENST00000514552 RSBN1LQ6PCB5 846 aaPredicted RBP12.29□□□□□ -0.44
PDE4D-222ENST00000514552 RIC3Q7Z5B4 369 aa12.29□□□□□ -0.44
PDE4D-222ENST00000514552 CLK2P49760 499 aaKnown RBP12.28□□□□□ -0.44
PDE4D-222ENST00000514552 TUSC1Q2TAM9 212 aa12.28□□□□□ -0.44
PDE4D-222ENST00000514552 NDUFV2P19404 249 aa12.27□□□□□ -0.45
PDE4D-222ENST00000514552 POLR3EQ9NVU0 708 aa12.27□□□□□ -0.45
PDE4D-222ENST00000514552 CHD1O14646 1710 aa12.27□□□□□ -0.45
PDE4D-222ENST00000514552 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.45
PDE4D-222ENST00000514552 FDX1P10109 184 aa12.26□□□□□ -0.45
PDE4D-222ENST00000514552 PUS10Q3MIT2 529 aaKnown RBP12.26□□□□□ -0.45
PDE4D-222ENST00000514552 PCMTD1Q96MG8 357 aaPredicted RBP12.26□□□□□ -0.45
PDE4D-222ENST00000514552 NR1I2O75469 434 aa12.25□□□□□ -0.45
PDE4D-222ENST00000514552 LIMD1Q9UGP4 676 aa12.25□□□□□ -0.45
PDE4D-222ENST00000514552 BLOC1S3Q6QNY0 202 aa12.24□□□□□ -0.45
PDE4D-222ENST00000514552 HLA-CQ95604 372 aa12.24□□□□□ -0.45
PDE4D-222ENST00000514552 FGD5Q6ZNL6 1462 aa12.23□□□□□ -0.45
PDE4D-222ENST00000514552 SOGA1O94964 1423 aa12.23□□□□□ -0.45
PDE4D-222ENST00000514552 SLC27A5Q9Y2P5 690 aa12.23□□□□□ -0.45
PDE4D-222ENST00000514552 CUX1P39880 1505 aa12.22□□□□□ -0.45
PDE4D-222ENST00000514552 MAGI1Q96QZ7 1491 aaPredicted RBP12.22□□□□□ -0.45
PDE4D-222ENST00000514552 GUCA2AQ02747 115 aa12.22□□□□□ -0.45
PDE4D-222ENST00000514552 Q3C1V9 767 aa12.22□□□□□ -0.45
PDE4D-222ENST00000514552 MTRQ99707 1265 aa12.22□□□□□ -0.45
PDE4D-222ENST00000514552 PCDHGC3Q9UN70 934 aa12.22□□□□□ -0.45
PDE4D-222ENST00000514552 RAD54L2Q9Y4B4 1467 aa12.21□□□□□ -0.45
PDE4D-222ENST00000514552 COPS2P61201 443 aa12.21□□□□□ -0.45
PDE4D-222ENST00000514552 TJAP1Q5JTD0 557 aa12.21□□□□□ -0.45
PDE4D-222ENST00000514552 SCUBE3Q8IX30 993 aa12.21□□□□□ -0.45
PDE4D-222ENST00000514552 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.45
PDE4D-222ENST00000514552 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.21□□□□□ -0.45
PDE4D-222ENST00000514552 SALL2Q9Y467 1007 aaPredicted RBP12.21□□□□□ -0.45
PDE4D-222ENST00000514552 PRPF38BQ5VTL8 546 aaKnown RBP12.2□□□□□ -0.46
PDE4D-222ENST00000514552 IL21Q9HBE4 155 aa12.2□□□□□ -0.46
PDE4D-222ENST00000514552 ATP1B4Q9UN42 357 aaPredicted RBP12.19□□□□□ -0.46
PDE4D-222ENST00000514552 PCDHB15Q9Y5E8 787 aa12.19□□□□□ -0.46
PDE4D-222ENST00000514552 CLASP1Q7Z460 1538 aa12.19□□□□□ -0.46
PDE4D-222ENST00000514552 GRIN2BQ13224 1484 aa12.19□□□□□ -0.46
PDE4D-222ENST00000514552 SNAPC4Q5SXM2 1469 aa12.19□□□□□ -0.46
PDE4D-222ENST00000514552 ZPR1O75312 459 aa12.18□□□□□ -0.46
PDE4D-222ENST00000514552 ARAP1Q96P48 1450 aa12.18□□□□□ -0.46
PDE4D-222ENST00000514552 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
PDE4D-222ENST00000514552 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
PDE4D-222ENST00000514552 ZBTB3Q9H5J0 574 aa12.17□□□□□ -0.46
PDE4D-222ENST00000514552 SYNJ2O15056 1496 aa12.16□□□□□ -0.46
PDE4D-222ENST00000514552 SPDYE5A6NIY4 337 aa12.16□□□□□ -0.46
PDE4D-222ENST00000514552 LILRB3O75022 631 aa12.16□□□□□ -0.46
PDE4D-222ENST00000514552 FMNL1O95466 1100 aaPredicted RBP12.16□□□□□ -0.46
PDE4D-222ENST00000514552 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
PDE4D-222ENST00000514552 MTMR2Q13614 643 aa12.16□□□□□ -0.46
PDE4D-222ENST00000514552 CSPP1Q1MSJ5 1256 aa12.16□□□□□ -0.46
PDE4D-222ENST00000514552 BRICD5Q6PL45 260 aa12.16□□□□□ -0.46
PDE4D-222ENST00000514552 THAP11Q96EK4 314 aa12.16□□□□□ -0.46
PDE4D-222ENST00000514552 C6orf229H3BNL8 230 aa12.15□□□□□ -0.46
PDE4D-222ENST00000514552 PPP2R2DQ66LE6 453 aa12.15□□□□□ -0.46
PDE4D-222ENST00000514552 ABCA10Q8WWZ4 1543 aa12.15□□□□□ -0.46
PDE4D-222ENST00000514552 HRCP23327 699 aa12.14□□□□□ -0.47
PDE4D-222ENST00000514552 QPCTQ16769 361 aa12.14□□□□□ -0.47
PDE4D-222ENST00000514552 RNF19BQ6ZMZ0 732 aa12.14□□□□□ -0.47
PDE4D-222ENST00000514552 ABCA5Q8WWZ7 1642 aa12.13□□□□□ -0.47
PDE4D-222ENST00000514552 NUTM2BA6NNL0 878 aaPredicted RBP12.13□□□□□ -0.47
PDE4D-222ENST00000514552 NUTM2EB1AL46 878 aaPredicted RBP12.13□□□□□ -0.47
PDE4D-222ENST00000514552 KCNC4Q03721 635 aa12.13□□□□□ -0.47
PDE4D-222ENST00000514552 NUTM2DQ5VT03 806 aaPredicted RBP12.13□□□□□ -0.47
PDE4D-222ENST00000514552 NUTM2AQ8IVF1 878 aaPredicted RBP12.13□□□□□ -0.47
PDE4D-222ENST00000514552 CABLES1Q8TDN4 633 aa12.13□□□□□ -0.47
PDE4D-222ENST00000514552 ZNF516Q92618 1163 aa12.13□□□□□ -0.47
PDE4D-222ENST00000514552 PBRM1Q86U86 1689 aa12.13□□□□□ -0.47
PDE4D-222ENST00000514552 RETREG3Q86VR2 466 aa12.12□□□□□ -0.47
PDE4D-222ENST00000514552 GAPVD1Q14C86 1478 aa12.12□□□□□ -0.47
PDE4D-222ENST00000514552 SYMPKQ92797 1274 aaKnown RBP12.11□□□□□ -0.47
PDE4D-222ENST00000514552 SPSB2Q99619 263 aa12.11□□□□□ -0.47
PDE4D-222ENST00000514552 USB1Q9BQ65 265 aaKnown RBP12.11□□□□□ -0.47
PDE4D-222ENST00000514552 ADH1BP00325 375 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms