RNA–Protein interactions for RNA: ENST00000514552.5

PDE4D-222, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-222ENST00000514552 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
PDE4D-222ENST00000514552 CHIC1Q5VXU3 224 aa29.06■■■□□ 2.24
PDE4D-222ENST00000514552 PHF23Q9BUL5 403 aaPredicted RBP25.54■■□□□ 1.68
PDE4D-222ENST00000514552 SENP3Q9H4L4 574 aaPredicted RBP25.11■■□□□ 1.61
PDE4D-222ENST00000514552 PLPPR3Q6T4P5 718 aa23.68■■□□□ 1.38
PDE4D-222ENST00000514552 FOXD1Q16676 465 aa23.24■■□□□ 1.31
PDE4D-222ENST00000514552 PPP6R1Q9UPN7 881 aa22.47■■□□□ 1.19
PDE4D-222ENST00000514552 ADRA2BP18089 450 aa22.45■■□□□ 1.18
PDE4D-222ENST00000514552 PIAS4Q8N2W9 510 aaPredicted RBP21.96■■□□□ 1.11
PDE4D-222ENST00000514552 MSH5O43196 834 aa21.42■■□□□ 1.02
PDE4D-222ENST00000514552 PPP4R3CPQ6ZMV5 832 aa20.86■□□□□ 0.93
PDE4D-222ENST00000514552 SCAF1Q9H7N4 1312 aaKnown RBP20.63■□□□□ 0.89
PDE4D-222ENST00000514552 KCNA4P22459 653 aa20.52■□□□□ 0.88
PDE4D-222ENST00000514552 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
PDE4D-222ENST00000514552 MAPK8IP2Q13387 824 aaPredicted RBP20.32■□□□□ 0.84
PDE4D-222ENST00000514552 CNKSR2Q8WXI2 1034 aa20.27■□□□□ 0.84
PDE4D-222ENST00000514552 DMRT2Q9Y5R5 561 aa20.06■□□□□ 0.8
PDE4D-222ENST00000514552 NPM3O75607 178 aaKnown RBP20.05■□□□□ 0.8
PDE4D-222ENST00000514552 RNF216Q9NWF9 866 aaPredicted RBP19.84■□□□□ 0.77
PDE4D-222ENST00000514552 HOXD11P31277 338 aaPredicted RBP19.72■□□□□ 0.75
PDE4D-222ENST00000514552 SLC4A1APQ9BWU0 796 aaKnown RBP19.6■□□□□ 0.73
PDE4D-222ENST00000514552 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
PDE4D-222ENST00000514552 POTEDQ86YR6 584 aa19.19■□□□□ 0.66
PDE4D-222ENST00000514552 EHMT2Q96KQ7 1210 aa19.17■□□□□ 0.66
PDE4D-222ENST00000514552 DCAF8L1A6NGE4 600 aa19.13■□□□□ 0.65
PDE4D-222ENST00000514552 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
PDE4D-222ENST00000514552 SLC4A2P04920 1241 aa18.89■□□□□ 0.61
PDE4D-222ENST00000514552 FOXD4L1Q9NU39 408 aa18.89■□□□□ 0.61
PDE4D-222ENST00000514552 ZBTB22O15209 634 aa18.88■□□□□ 0.61
PDE4D-222ENST00000514552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.77■□□□□ 0.6
PDE4D-222ENST00000514552 MYCNP04198 464 aaPredicted RBP18.56■□□□□ 0.56
PDE4D-222ENST00000514552 U3KPZ7 1027 aaPredicted RBP18.47■□□□□ 0.55
PDE4D-222ENST00000514552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
PDE4D-222ENST00000514552 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
PDE4D-222ENST00000514552 RNF39Q9H2S5 420 aa18.35■□□□□ 0.53
PDE4D-222ENST00000514552 SAMD1Q6SPF0 538 aaPredicted RBP18.28■□□□□ 0.52
PDE4D-222ENST00000514552 ATXN8OSP0DMR3 200 aa18.26■□□□□ 0.51
PDE4D-222ENST00000514552 C1QBPQ07021 282 aaKnown RBP18.17■□□□□ 0.5
PDE4D-222ENST00000514552 APLP2Q06481 763 aa18.14■□□□□ 0.49
PDE4D-222ENST00000514552 ATF5Q9Y2D1 282 aaPredicted RBP17.99■□□□□ 0.47
PDE4D-222ENST00000514552 SPINK5Q9NQ38 1064 aaPredicted RBP17.89■□□□□ 0.45
PDE4D-222ENST00000514552 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.44
PDE4D-222ENST00000514552 CAPN15O75808 1086 aa17.82■□□□□ 0.44
PDE4D-222ENST00000514552 TRHP20396 242 aaPredicted RBP17.76■□□□□ 0.43
PDE4D-222ENST00000514552 CACNB1Q02641 598 aaPredicted RBP17.75■□□□□ 0.43
PDE4D-222ENST00000514552 POLA2Q14181 598 aa17.52■□□□□ 0.4
PDE4D-222ENST00000514552 DSG3P32926 999 aa17.51■□□□□ 0.39
PDE4D-222ENST00000514552 ABCB7O75027 752 aa17.47■□□□□ 0.39
PDE4D-222ENST00000514552 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
PDE4D-222ENST00000514552 FBLN2P98095 1184 aa17.28■□□□□ 0.36
PDE4D-222ENST00000514552 MKRN4PQ13434 485 aaPredicted RBP17.24■□□□□ 0.35
PDE4D-222ENST00000514552 FKBP8Q14318 412 aa17.08■□□□□ 0.32
PDE4D-222ENST00000514552 SPDYE4A6NLX3 237 aa16.94■□□□□ 0.3
PDE4D-222ENST00000514552 NISCHQ9Y2I1 1504 aa16.92■□□□□ 0.3
PDE4D-222ENST00000514552 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
PDE4D-222ENST00000514552 SPDYE2BA6NHP3 402 aa16.84■□□□□ 0.29
PDE4D-222ENST00000514552 SPDYE6P0CI01 402 aa16.84■□□□□ 0.29
PDE4D-222ENST00000514552 SPDYE2Q495Y8 402 aa16.84■□□□□ 0.29
PDE4D-222ENST00000514552 ZNF692Q9BU19 519 aaPredicted RBP16.77■□□□□ 0.28
PDE4D-222ENST00000514552 PROM2Q8N271 834 aa16.72■□□□□ 0.27
PDE4D-222ENST00000514552 RBM42Q9BTD8 480 aaKnown RBP16.72■□□□□ 0.27
PDE4D-222ENST00000514552 SSUH2Q9Y2M2 353 aa16.72■□□□□ 0.27
PDE4D-222ENST00000514552 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
PDE4D-222ENST00000514552 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
PDE4D-222ENST00000514552 FBXO3Q9UK99 471 aa16.49■□□□□ 0.23
PDE4D-222ENST00000514552 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
PDE4D-222ENST00000514552 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
PDE4D-222ENST00000514552 SPDYE1Q8NFV5 336 aaPredicted RBP16.3■□□□□ 0.2
PDE4D-222ENST00000514552 VASPP50552 380 aaPredicted RBP16.23■□□□□ 0.19
PDE4D-222ENST00000514552 CLEC11AQ9Y240 323 aa16.17■□□□□ 0.18
PDE4D-222ENST00000514552 PITPNM1O00562 1244 aa16.15■□□□□ 0.18
PDE4D-222ENST00000514552 PRR29P0C7W0 189 aa16.08■□□□□ 0.16
PDE4D-222ENST00000514552 MIER1Q8N108 512 aa16.04■□□□□ 0.16
PDE4D-222ENST00000514552 PLCD3Q8N3E9 789 aa16.04■□□□□ 0.16
PDE4D-222ENST00000514552 IFNLR1Q8IU57 520 aaPredicted RBP16■□□□□ 0.15
PDE4D-222ENST00000514552 PLEKHG5O94827 1062 aa15.99■□□□□ 0.15
PDE4D-222ENST00000514552 CHRDL2Q6WN34 429 aa15.92■□□□□ 0.14
PDE4D-222ENST00000514552 KLHL34Q8N239 644 aa15.91■□□□□ 0.14
PDE4D-222ENST00000514552 CREBZFQ9NS37 354 aa15.91■□□□□ 0.14
PDE4D-222ENST00000514552 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
PDE4D-222ENST00000514552 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
PDE4D-222ENST00000514552 FXR2P51116 673 aaKnown RBP eCLIP15.84■□□□□ 0.13
PDE4D-222ENST00000514552 SPOCK2Q92563 424 aa15.82■□□□□ 0.12
PDE4D-222ENST00000514552 RTN4Q9NQC3 1192 aaKnown RBP15.78■□□□□ 0.12
PDE4D-222ENST00000514552 MNX1P50219 401 aaPredicted RBP15.76■□□□□ 0.11
PDE4D-222ENST00000514552 PRKAR2AP13861 404 aaKnown RBP15.75■□□□□ 0.11
PDE4D-222ENST00000514552 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
PDE4D-222ENST00000514552 PIP4P2Q8N4L2 257 aa15.75■□□□□ 0.11
PDE4D-222ENST00000514552 NPM1P06748 294 aaKnown RBP eCLIP15.68■□□□□ 0.1
PDE4D-222ENST00000514552 FARP1Q9Y4F1 1045 aaPredicted RBP15.66■□□□□ 0.1
PDE4D-222ENST00000514552 NUBP1P53384 320 aa15.63■□□□□ 0.09
PDE4D-222ENST00000514552 PKD2Q13563 968 aa15.53■□□□□ 0.08
PDE4D-222ENST00000514552 GSE1Q14687 1217 aa15.52■□□□□ 0.08
PDE4D-222ENST00000514552 RASEFQ8IZ41 740 aa15.51■□□□□ 0.07
PDE4D-222ENST00000514552 FAM212AQ96EL1 285 aa15.51■□□□□ 0.07
PDE4D-222ENST00000514552 CIZ1Q9ULV3 898 aaPredicted RBP15.51■□□□□ 0.07
PDE4D-222ENST00000514552 DCAF8Q5TAQ9 597 aa15.47■□□□□ 0.07
PDE4D-222ENST00000514552 TRIM41Q8WV44 630 aa15.44■□□□□ 0.06
PDE4D-222ENST00000514552 ECM2O94769 699 aaPredicted RBP15.41■□□□□ 0.06
PDE4D-222ENST00000514552 TSPYL2Q9H2G4 693 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms