RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-206ENST00000482000 USP46P62068 366 aa8.97□□□□□ -0.97
PRKCB-206ENST00000482000 KCTD12Q96CX2 325 aaKnown RBP8.97□□□□□ -0.97
PRKCB-206ENST00000482000 POLR3EQ9NVU0 708 aa8.97□□□□□ -0.97
PRKCB-206ENST00000482000 RIMBP3CA6NJZ7 1639 aa8.96□□□□□ -0.98
PRKCB-206ENST00000482000 RIMBP3BA6NNM3 1639 aa8.96□□□□□ -0.98
PRKCB-206ENST00000482000 RIMBP3Q9UFD9 1639 aa8.96□□□□□ -0.98
PRKCB-206ENST00000482000 MOXD2PA6NHM9 499 aa8.96□□□□□ -0.98
PRKCB-206ENST00000482000 SPTLC1O15269 473 aa8.96□□□□□ -0.98
PRKCB-206ENST00000482000 KMT5BQ4FZB7 885 aa8.96□□□□□ -0.98
PRKCB-206ENST00000482000 RIC3Q7Z5B4 369 aa8.96□□□□□ -0.98
PRKCB-206ENST00000482000 PROCA1Q8NCQ7 364 aaPredicted RBP8.96□□□□□ -0.98
PRKCB-206ENST00000482000 GTF3C3Q9Y5Q9 886 aa8.96□□□□□ -0.98
PRKCB-206ENST00000482000 HOXA2O43364 376 aa8.95□□□□□ -0.98
PRKCB-206ENST00000482000 ACTN4O43707 911 aaKnown RBP8.95□□□□□ -0.98
PRKCB-206ENST00000482000 NDUFV2P19404 249 aa8.95□□□□□ -0.98
PRKCB-206ENST00000482000 GJA5P36382 358 aa8.95□□□□□ -0.98
PRKCB-206ENST00000482000 FUT2Q10981 343 aa8.95□□□□□ -0.98
PRKCB-206ENST00000482000 RSBN1LQ6PCB5 846 aaPredicted RBP8.95□□□□□ -0.98
PRKCB-206ENST00000482000 PCMTD1Q96MG8 357 aaPredicted RBP8.95□□□□□ -0.98
PRKCB-206ENST00000482000 WBP1LQ9NX94 342 aa8.95□□□□□ -0.98
PRKCB-206ENST00000482000 LIMD1Q9UGP4 676 aa8.95□□□□□ -0.98
PRKCB-206ENST00000482000 CUX1P39880 1505 aa8.95□□□□□ -0.98
PRKCB-206ENST00000482000 ATP6V1AP38606 617 aa8.94□□□□□ -0.98
PRKCB-206ENST00000482000 CLK2P49760 499 aaKnown RBP8.94□□□□□ -0.98
PRKCB-206ENST00000482000 APLP1P51693 650 aa8.94□□□□□ -0.98
PRKCB-206ENST00000482000 TUSC1Q2TAM9 212 aa8.94□□□□□ -0.98
PRKCB-206ENST00000482000 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.94□□□□□ -0.98
PRKCB-206ENST00000482000 MYT1LQ9UL68 1186 aa8.94□□□□□ -0.98
PRKCB-206ENST00000482000 AQRO60306 1485 aaKnown RBP eCLIP8.94□□□□□ -0.981e-6■■■■■ 33.8
PRKCB-206ENST00000482000 RAD54L2Q9Y4B4 1467 aa8.94□□□□□ -0.98
PRKCB-206ENST00000482000 SPNS2Q8IVW8 549 aa8.93□□□□□ -0.98
PRKCB-206ENST00000482000 PRR14Q9BWN1 585 aa8.93□□□□□ -0.98
PRKCB-206ENST00000482000 WDR97A6NE52 1622 aa8.93□□□□□ -0.98
PRKCB-206ENST00000482000 FGD5Q6ZNL6 1462 aa8.92□□□□□ -0.98
PRKCB-206ENST00000482000 GRIPAP1Q4V328 841 aa8.92□□□□□ -0.98
PRKCB-206ENST00000482000 ARHGEF11O15085 1522 aa8.91□□□□□ -0.98
PRKCB-206ENST00000482000 HLA-CQ95604 372 aa8.91□□□□□ -0.98
PRKCB-206ENST00000482000 PCDHB15Q9Y5E8 787 aa8.91□□□□□ -0.98
PRKCB-206ENST00000482000 SOGA1O94964 1423 aa8.9□□□□□ -0.98
PRKCB-206ENST00000482000 GUCA2AQ02747 115 aa8.9□□□□□ -0.98
PRKCB-206ENST00000482000 MORN1Q5T089 497 aa8.9□□□□□ -0.98
PRKCB-206ENST00000482000 NYAP1Q6ZVC0 841 aa8.9□□□□□ -0.98
PRKCB-206ENST00000482000 PCDHGC3Q9UN70 934 aa8.9□□□□□ -0.98
PRKCB-206ENST00000482000 FDX1P10109 184 aa8.89□□□□□ -0.99
PRKCB-206ENST00000482000 PUS10Q3MIT2 529 aaKnown RBP8.89□□□□□ -0.99
PRKCB-206ENST00000482000 FBXO31Q5XUX0 539 aaPredicted RBP8.89□□□□□ -0.99
PRKCB-206ENST00000482000 TDRD9Q8NDG6 1382 aaKnown RBP8.88□□□□□ -0.99
PRKCB-206ENST00000482000 PBRM1Q86U86 1689 aa8.88□□□□□ -0.99
PRKCB-206ENST00000482000 LILRB3O75022 631 aa8.88□□□□□ -0.99
PRKCB-206ENST00000482000 PTPN5P54829 565 aa8.88□□□□□ -0.99
PRKCB-206ENST00000482000 PPP2R2DQ66LE6 453 aa8.88□□□□□ -0.99
PRKCB-206ENST00000482000 QPCTQ16769 361 aa8.87□□□□□ -0.99
PRKCB-206ENST00000482000 PRPF38BQ5VTL8 546 aaKnown RBP8.87□□□□□ -0.99
PRKCB-206ENST00000482000 ATP1B4Q9UN42 357 aaPredicted RBP8.87□□□□□ -0.99
PRKCB-206ENST00000482000 SLC27A5Q9Y2P5 690 aa8.87□□□□□ -0.99
PRKCB-206ENST00000482000 SNAPC4Q5SXM2 1469 aa8.87□□□□□ -0.99
PRKCB-206ENST00000482000 CSPP1Q1MSJ5 1256 aa8.86□□□□□ -0.99
PRKCB-206ENST00000482000 PCDHB3Q9Y5E6 796 aa8.86□□□□□ -0.99
PRKCB-206ENST00000482000 ABCA5Q8WWZ7 1642 aa8.85□□□□□ -0.99
PRKCB-206ENST00000482000 SUPT5HO00267 1087 aaKnown RBP8.85□□□□□ -0.99
PRKCB-206ENST00000482000 HRCP23327 699 aa8.85□□□□□ -0.99
PRKCB-206ENST00000482000 SCUBE3Q8IX30 993 aa8.85□□□□□ -0.99
PRKCB-206ENST00000482000 RNF166Q96A37 237 aaPredicted RBP8.85□□□□□ -0.99
PRKCB-206ENST00000482000 CLASP1Q7Z460 1538 aa8.85□□□□□ -0.99
PRKCB-206ENST00000482000 MAGI1Q96QZ7 1491 aaPredicted RBP8.84□□□□□ -0.99
PRKCB-206ENST00000482000 BLOC1S3Q6QNY0 202 aa8.84□□□□□ -0.99
PRKCB-206ENST00000482000 CABLES1Q8TDN4 633 aa8.84□□□□□ -0.99
PRKCB-206ENST00000482000 ZBTB3Q9H5J0 574 aa8.84□□□□□ -0.99
PRKCB-206ENST00000482000 SALL2Q9Y467 1007 aaPredicted RBP8.84□□□□□ -0.99
PRKCB-206ENST00000482000 BIVM-ERCC5R4GMW8 1640 aa8.83□□□□□ -1
PRKCB-206ENST00000482000 GRIN2BQ13224 1484 aa8.83□□□□□ -1
PRKCB-206ENST00000482000 ARAP1Q96P48 1450 aa8.83□□□□□ -1
PRKCB-206ENST00000482000 RFC5P40937 340 aa8.83□□□□□ -1
PRKCB-206ENST00000482000 MTMR2Q13614 643 aa8.83□□□□□ -1
PRKCB-206ENST00000482000 RTL5Q5HYW3 569 aaPredicted RBP8.83□□□□□ -1
PRKCB-206ENST00000482000 ABCA10Q8WWZ4 1543 aa8.82□□□□□ -1
PRKCB-206ENST00000482000 NR1I2O75469 434 aa8.82□□□□□ -1
PRKCB-206ENST00000482000 Q3C1V9 767 aa8.82□□□□□ -1
PRKCB-206ENST00000482000 SYMPKQ92797 1274 aaKnown RBP8.82□□□□□ -1
PRKCB-206ENST00000482000 THAP11Q96EK4 314 aa8.82□□□□□ -1
PRKCB-206ENST00000482000 HCSTQ9UBK5 93 aa8.82□□□□□ -1
PRKCB-206ENST00000482000 SYNJ2O15056 1496 aa8.82□□□□□ -1
PRKCB-206ENST00000482000 SYNJ1O43426 1573 aa8.82□□□□□ -1
PRKCB-206ENST00000482000 TOP2BQ02880 1626 aa8.81□□□□□ -1
PRKCB-206ENST00000482000 SPDYE5A6NIY4 337 aa8.81□□□□□ -1
PRKCB-206ENST00000482000 NUTM2BA6NNL0 878 aaPredicted RBP8.81□□□□□ -1
PRKCB-206ENST00000482000 NUTM2EB1AL46 878 aaPredicted RBP8.81□□□□□ -1
PRKCB-206ENST00000482000 MMRN1Q13201 1228 aa8.81□□□□□ -1
PRKCB-206ENST00000482000 NUTM2DQ5VT03 806 aaPredicted RBP8.81□□□□□ -1
PRKCB-206ENST00000482000 BRICD5Q6PL45 260 aa8.81□□□□□ -1
PRKCB-206ENST00000482000 NUTM2AQ8IVF1 878 aaPredicted RBP8.81□□□□□ -1
PRKCB-206ENST00000482000 GAPVD1Q14C86 1478 aa8.81□□□□□ -1
PRKCB-206ENST00000482000 C6orf229H3BNL8 230 aa8.8□□□□□ -1
PRKCB-206ENST00000482000 COPS2P61201 443 aa8.8□□□□□ -1
PRKCB-206ENST00000482000 TJAP1Q5JTD0 557 aa8.8□□□□□ -1
PRKCB-206ENST00000482000 MTRQ99707 1265 aa8.8□□□□□ -1
PRKCB-206ENST00000482000 TMEM259Q4ZIN3 620 aa8.79□□□□□ -1
PRKCB-206ENST00000482000 RNF19BQ6ZMZ0 732 aa8.79□□□□□ -1
PRKCB-206ENST00000482000 CFAP99D6REC4 459 aa8.78□□□□□ -1
PRKCB-206ENST00000482000 FMNL1O95466 1100 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms