RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Dhx57Q6P5D3 1388 aaKnown RBP10.85□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Prm3Q62100 101 aa10.85□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Ssh1Q76I79 1042 aa10.85□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Rsph4aQ8BYM7 716 aa10.85□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Eif3aP23116 1344 aaKnown RBP10.85□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Aebp1Q640N1 1128 aa10.85□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Q9D2X8 372 aa10.85□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Pmfbp1Q9WVQ0 1022 aa10.85□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Rab11fip3Q8CHD8 1047 aa10.84□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Trim30cD3YVI9 513 aa10.84□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Map3k7clP58500 142 aa10.84□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Tsen2Q6P7W5 460 aa10.84□□□□□ -0.67
Ptpre-204ENSMUST00000209979 March6Q6ZQ89 909 aa10.84□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Paip2Q9D6V8 124 aa10.84□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Clul1Q3ZRW6 464 aa10.84□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Pak3Q61036 559 aa10.84□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Smc4Q8CG47 1286 aa10.84□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Tceal9Q9DD24 104 aa10.84□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Fmnl2A2APV2 1086 aa10.83□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Spata24Q6P926 205 aa10.83□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Sept6Q9R1T4 434 aa10.83□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Sptbn5F6UCX4 1208 aa10.83□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Paxbp1P58501 919 aa10.83□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Vps53Q8CCB4 832 aa10.83□□□□□ -0.68
Ptpre-204ENSMUST00000209979 SelenooQ9DBC0 667 aa10.83□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Sparcl1P70663 650 aa10.83□□□□□ -0.68
Ptpre-204ENSMUST00000209979 SkilQ60665 675 aa10.83□□□□□ -0.68
Ptpre-204ENSMUST00000209979 IncenpQ9WU62 880 aa10.83□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Slc4a1apE9PX68 744 aa10.82□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Vgll3P85442 326 aa10.82□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Kdm5dQ62240 1548 aa10.82□□□□□ -0.68
Ptpre-204ENSMUST00000209979 TnmdQ9EP64 317 aa10.82□□□□□ -0.68
Ptpre-204ENSMUST00000209979 TxlnaQ6PAM1 554 aaKnown RBP10.82□□□□□ -0.68
Ptpre-204ENSMUST00000209979 CenphQ9QYM8 241 aa10.82□□□□□ -0.68
Ptpre-204ENSMUST00000209979 GsdmaQ9EST1 446 aa10.82□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Ccdc191J3QQ27 883 aa10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 NmiO35309 314 aa10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Lrrcc1Q69ZB0 1026 aa10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Rnf187Q8BFX1 236 aa10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Stk31Q99MW1 1018 aa10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Lemd3Q9WU40 921 aa10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Gm45140A0A0N4SUM8 220 aa10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Rbm25B2RY56 838 aaKnown RBP10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Dnajc2P54103 621 aaKnown RBP10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Hvcn1Q3U2S8 269 aa10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 PdiltQ9DAN1 588 aa10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Nek4Q9Z1J2 792 aa10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Birc3O08863 600 aa10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Smc1bQ920F6 1248 aa10.81□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Ppfibp2O35711 882 aa10.8□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Tnnt1O88346 262 aa10.8□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Ddx46Q569Z5 1032 aaKnown RBP10.8□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Trak1Q6PD31 939 aa10.8□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Ccdc39Q9D5Y1 937 aa10.8□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Ercc6lQ8BHK9 1240 aa10.8□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Gm18336A0A140LIU8 765 aa10.8□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Nf2P46662 596 aa10.8□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Cfap58B2RW38 873 aa10.8□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Zkscan2G3X952 960 aa10.8□□□□□ -0.68
Ptpre-204ENSMUST00000209979 ImpactO55091 318 aa10.8□□□□□ -0.68
Ptpre-204ENSMUST00000209979 MyclP10166 368 aa10.8□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Kcnj4P52189 445 aa10.79□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Ccdc96Q9CR92 584 aa10.79□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Mnat1P51949 309 aa10.79□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Pank3Q8R2W9 370 aa10.79□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Pafah1b1P63005 410 aaKnown RBP10.79□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Usp48Q3V0C5 1052 aa10.79□□□□□ -0.68
Ptpre-204ENSMUST00000209979 ScaperF8VQ70 1398 aaKnown RBP10.79□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Tex2Q6ZPJ0 1128 aaKnown RBP10.78□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Gtpbp4Q99ME9 634 aaKnown RBP10.78□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Kif2aP28740 705 aa10.78□□□□□ -0.68
Ptpre-204ENSMUST00000209979 HdgfP51859 237 aaKnown RBP10.78□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Erlin1Q91X78 346 aa10.78□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Cyp46a1Q9WVK8 500 aa10.78□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Jakmip3Q5DTN8 844 aa10.78□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Ccdc30Q8BVF4 654 aa10.78□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Triml2E9PW10 424 aa10.78□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Slu7Q8BHJ9 585 aa10.78□□□□□ -0.68
Ptpre-204ENSMUST00000209979 UacaQ8CGB3 1411 aa10.78□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Exoc8Q6PGF7 716 aa10.77□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Cfap53Q9D439 514 aa10.77□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Cabp1Q9JLK7 227 aa10.77□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Krt85Q9Z2T6 507 aa10.77□□□□□ -0.68
Ptpre-204ENSMUST00000209979 Ccdc171E9Q1U1 1324 aa10.77□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Stk38Q91VJ4 465 aa10.77□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Gcc1Q9D4H2 778 aa10.77□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Ccdc88bQ4QRL3 1481 aa10.77□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Plekhd1B2RPU2 505 aa10.77□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Map2k1P31938 393 aa10.77□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Plin1Q8CGN5 517 aa10.77□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Cfap45Q9D9U9 551 aa10.77□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Mcm4P49717 862 aa10.76□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Lamb3Q61087 1168 aa10.76□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Sass6Q80UK7 654 aa10.76□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Tango6Q8C3S2 1079 aa10.76□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Stim1P70302 685 aa10.76□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Maats1Q8BRC6 783 aa10.76□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Tmem132aQ922P8 1018 aa10.76□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Znf692Q3U381 531 aa10.76□□□□□ -0.69
Ptpre-204ENSMUST00000209979 Nup88Q8CEC0 753 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms