RNA–Protein interactions for RNA: ENSMUST00000188338.6

Msh4-203, Transcript of MutS protein homolog 4, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Msh4, Length 2,802 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-203ENSMUST00000188338 Kidins220E9Q9B7 1793 aa12.45□□□□□ -0.42
Msh4-203ENSMUST00000188338 Lemd3Q9WU40 921 aa12.44□□□□□ -0.42
Msh4-203ENSMUST00000188338 Xrn1P97789 1719 aaKnown RBP12.44□□□□□ -0.42
Msh4-203ENSMUST00000188338 TnikP83510 1323 aa12.44□□□□□ -0.42
Msh4-203ENSMUST00000188338 Kiaa1107Q80TK0 1369 aa12.44□□□□□ -0.42
Msh4-203ENSMUST00000188338 AampJ3QN89 436 aa12.44□□□□□ -0.42
Msh4-203ENSMUST00000188338 Dnai1Q8C0M8 701 aa12.43□□□□□ -0.42
Msh4-203ENSMUST00000188338 P2rx7Q9Z1M0 595 aa12.43□□□□□ -0.42
Msh4-203ENSMUST00000188338 Myo3aQ8K3H5 1613 aa12.43□□□□□ -0.42
Msh4-203ENSMUST00000188338 Ak7Q9D2H2 614 aa12.43□□□□□ -0.42
Msh4-203ENSMUST00000188338 Clasp1Q80TV8 1535 aaKnown RBP12.43□□□□□ -0.42
Msh4-203ENSMUST00000188338 Mbd3Q9Z2D8 285 aaKnown RBP12.42□□□□□ -0.42
Msh4-203ENSMUST00000188338 Smc5Q8CG46 1101 aaKnown RBP12.42□□□□□ -0.42
Msh4-203ENSMUST00000188338 Ylpm1Q9R0I7 1386 aaKnown RBP12.41□□□□□ -0.42
Msh4-203ENSMUST00000188338 Hsp90ab1P11499 724 aaKnown RBP12.41□□□□□ -0.42
Msh4-203ENSMUST00000188338 Abca8bQ8K440 1620 aa12.41□□□□□ -0.42
Msh4-203ENSMUST00000188338 Cluap1Q8R3P7 413 aa12.41□□□□□ -0.42
Msh4-203ENSMUST00000188338 Ppp1r3fQ9JIG4 799 aa12.41□□□□□ -0.42
Msh4-203ENSMUST00000188338 Rlbp1Q9Z275 317 aa12.41□□□□□ -0.42
Msh4-203ENSMUST00000188338 Hecw1Q8K4P8 1604 aa12.4□□□□□ -0.42
Msh4-203ENSMUST00000188338 Znf692Q3U381 531 aa12.4□□□□□ -0.42
Msh4-203ENSMUST00000188338 Arid4bA2CG63 1314 aaKnown RBP12.4□□□□□ -0.42
Msh4-203ENSMUST00000188338 AatkQ80YE4 1365 aa12.4□□□□□ -0.43
Msh4-203ENSMUST00000188338 Ksr2Q3UVC0 959 aa12.39□□□□□ -0.43
Msh4-203ENSMUST00000188338 U2af1Q9D883 239 aaKnown RBP12.39□□□□□ -0.43
Msh4-203ENSMUST00000188338 Abca6Q8K441 1624 aa12.39□□□□□ -0.43
Msh4-203ENSMUST00000188338 Pnmal2G3X9N3 661 aa12.39□□□□□ -0.43
Msh4-203ENSMUST00000188338 Uspl1Q3ULM6 1089 aa12.39□□□□□ -0.43
Msh4-203ENSMUST00000188338 Znf330Q922H9 316 aa12.39□□□□□ -0.43
Msh4-203ENSMUST00000188338 Atf7ipQ7TT18 1306 aa12.39□□□□□ -0.43
Msh4-203ENSMUST00000188338 Pola1P33609 1465 aa12.38□□□□□ -0.43
Msh4-203ENSMUST00000188338 Kdm5aQ3UXZ9 1690 aa12.38□□□□□ -0.43
Msh4-203ENSMUST00000188338 Gm6268A2A3U9 297 aa12.38□□□□□ -0.43
Msh4-203ENSMUST00000188338 Ythdc2B2RR83 1445 aaKnown RBP12.38□□□□□ -0.43
Msh4-203ENSMUST00000188338 KarsQ99MN1 595 aaKnown RBP12.38□□□□□ -0.43
Msh4-203ENSMUST00000188338 GsdmaQ9EST1 446 aa12.38□□□□□ -0.43
Msh4-203ENSMUST00000188338 Ttc37F8VPK0 1563 aa12.37□□□□□ -0.43
Msh4-203ENSMUST00000188338 Duxf3A0A0N4SV92 674 aa12.37□□□□□ -0.43
Msh4-203ENSMUST00000188338 Rtn4Q99P72 1162 aaKnown RBP12.37□□□□□ -0.43
Msh4-203ENSMUST00000188338 Myo5cE9Q1F5 1742 aa12.36□□□□□ -0.43
Msh4-203ENSMUST00000188338 Spryd3E9Q9B3 442 aa12.36□□□□□ -0.43
Msh4-203ENSMUST00000188338 NgefQ8CHT1 710 aa12.36□□□□□ -0.43
Msh4-203ENSMUST00000188338 Uggt2E9Q4X2 1504 aa12.35□□□□□ -0.43
Msh4-203ENSMUST00000188338 Neurl4Q5NCX5 1563 aa12.35□□□□□ -0.43
Msh4-203ENSMUST00000188338 Tsen2Q6P7W5 460 aa12.35□□□□□ -0.43
Msh4-203ENSMUST00000188338 Itsn2Q9Z0R6 1659 aa12.35□□□□□ -0.43
Msh4-203ENSMUST00000188338 Ccdc183A2AJB1 534 aa12.35□□□□□ -0.43
Msh4-203ENSMUST00000188338 Taok2Q6ZQ29 1240 aa12.35□□□□□ -0.43
Msh4-203ENSMUST00000188338 Exosc9Q9JHI7 438 aaKnown RBP12.35□□□□□ -0.43
Msh4-203ENSMUST00000188338 Ttc41Q692V3 1318 aa12.35□□□□□ -0.43
Msh4-203ENSMUST00000188338 AU022751B1B0V2 589 aa12.34□□□□□ -0.43
Msh4-203ENSMUST00000188338 Ipo8Q7TMY7 1010 aa12.34□□□□□ -0.43
Msh4-203ENSMUST00000188338 Abca17E9PX95 1733 aa12.34□□□□□ -0.43
Msh4-203ENSMUST00000188338 Ralbp1Q62172 648 aa12.34□□□□□ -0.43
Msh4-203ENSMUST00000188338 Igsf3Q6ZQA6 1194 aa12.34□□□□□ -0.43
Msh4-203ENSMUST00000188338 Nutm1Q8BHP2 1126 aa12.33□□□□□ -0.44
Msh4-203ENSMUST00000188338 Ppm1gQ61074 542 aa12.32□□□□□ -0.44
Msh4-203ENSMUST00000188338 AnkarA2RT91 1465 aa12.32□□□□□ -0.44
Msh4-203ENSMUST00000188338 Mapk8ip3Q9ESN9 1337 aa12.32□□□□□ -0.44
Msh4-203ENSMUST00000188338 Nphp4P59240 1425 aa12.32□□□□□ -0.44
Msh4-203ENSMUST00000188338 Ptch1Q61115 1434 aa12.32□□□□□ -0.44
Msh4-203ENSMUST00000188338 Kiaa1210E9Q0C6 1637 aa12.31□□□□□ -0.44
Msh4-203ENSMUST00000188338 Nos1Q9Z0J4 1429 aa12.31□□□□□ -0.44
Msh4-203ENSMUST00000188338 Irx3P81067 507 aa12.31□□□□□ -0.44
Msh4-203ENSMUST00000188338 Cfap65Q3V0B4 1847 aa12.31□□□□□ -0.44
Msh4-203ENSMUST00000188338 Iqgap3F8VQ29 1632 aa12.31□□□□□ -0.44
Msh4-203ENSMUST00000188338 IbtkQ6ZPR6 1352 aaKnown RBP12.31□□□□□ -0.44
Msh4-203ENSMUST00000188338 Trim58Q5NCC9 485 aa12.31□□□□□ -0.44
Msh4-203ENSMUST00000188338 IqubQ8CDK3 788 aa12.31□□□□□ -0.44
Msh4-203ENSMUST00000188338 Cdk5rap2Q8K389 1822 aa12.3□□□□□ -0.44
Msh4-203ENSMUST00000188338 Cald1E9QA15 768 aaKnown RBP12.3□□□□□ -0.44
Msh4-203ENSMUST00000188338 Myom1Q62234 1667 aaKnown RBP12.3□□□□□ -0.44
Msh4-203ENSMUST00000188338 Abca9Q8K449 1623 aa12.3□□□□□ -0.44
Msh4-203ENSMUST00000188338 Zfyve16Q80U44 1528 aa12.3□□□□□ -0.44
Msh4-203ENSMUST00000188338 Alpk3Q924C5 1678 aa12.3□□□□□ -0.44
Msh4-203ENSMUST00000188338 Fndc1E9Q043 1732 aa12.29□□□□□ -0.44
Msh4-203ENSMUST00000188338 Chrna2Q91X60 512 aa12.29□□□□□ -0.44
Msh4-203ENSMUST00000188338 Prex1Q69ZK0 1650 aa12.29□□□□□ -0.44
Msh4-203ENSMUST00000188338 Dusp27Q148W8 1138 aa12.29□□□□□ -0.44
Msh4-203ENSMUST00000188338 Gm156Q58A37 223 aa12.29□□□□□ -0.44
Msh4-203ENSMUST00000188338 Mre11Q61216 706 aa12.29□□□□□ -0.44
Msh4-203ENSMUST00000188338 Plin1Q8CGN5 517 aa12.29□□□□□ -0.44
Msh4-203ENSMUST00000188338 Ipo4Q8VI75 1082 aa12.29□□□□□ -0.44
Msh4-203ENSMUST00000188338 Scaf11E9PZM7 1456 aaKnown RBP12.28□□□□□ -0.44
Msh4-203ENSMUST00000188338 Nectin2P32507 530 aa12.28□□□□□ -0.44
Msh4-203ENSMUST00000188338 Aplp1Q03157 653 aa12.28□□□□□ -0.44
Msh4-203ENSMUST00000188338 Shq1Q7TMX5 569 aa12.28□□□□□ -0.44
Msh4-203ENSMUST00000188338 Stard8Q8K031 1019 aa12.28□□□□□ -0.44
Msh4-203ENSMUST00000188338 Igf1rQ60751 1373 aa12.27□□□□□ -0.44
Msh4-203ENSMUST00000188338 Cep152A2AUM9 1736 aaKnown RBP12.27□□□□□ -0.44
Msh4-203ENSMUST00000188338 Znf518aB2RRF6 1478 aaKnown RBP12.27□□□□□ -0.45
Msh4-203ENSMUST00000188338 Rims1Q99NE5 1463 aa12.27□□□□□ -0.45
Msh4-203ENSMUST00000188338 Mfap1aC0HKD8 439 aaKnown RBP12.27□□□□□ -0.45
Msh4-203ENSMUST00000188338 Mfap1bC0HKD9 439 aaKnown RBP12.27□□□□□ -0.45
Msh4-203ENSMUST00000188338 AcrbpQ3V140 540 aa12.26□□□□□ -0.45
Msh4-203ENSMUST00000188338 Map4k4P97820 1233 aaKnown RBP12.26□□□□□ -0.45
Msh4-203ENSMUST00000188338 DekQ7TNV0 380 aaKnown RBP12.26□□□□□ -0.45
Msh4-203ENSMUST00000188338 AU019823E9PUQ3 292 aa12.25□□□□□ -0.45
Msh4-203ENSMUST00000188338 Brd2Q7JJ13 798 aaKnown RBP12.25□□□□□ -0.45
Msh4-203ENSMUST00000188338 Tmco5bQ80X59 307 aa12.25□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms