Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Gm25239-201ENSMUST00000174915 86 ntBASIC61,25■■■■■ 7,4
Abca8bQ8K440 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC57,06■■■■■ 6,72
Abca8bQ8K440 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC55,83■■■■■ 6,53
Abca8bQ8K440 Gm24109-201ENSMUST00000175489 103 ntBASIC53,59■■■■■ 6,17
Abca8bQ8K440 Gm15042-201ENSMUST00000120212 883 ntBASIC52,99■■■■■ 6,07
Abca8bQ8K440 Gm15045-201ENSMUST00000117359 883 ntBASIC51,93■■■■■ 5,9
Abca8bQ8K440 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC51,82■■■■■ 5,89
Abca8bQ8K440 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC51,45■■■■■ 5,83
Abca8bQ8K440 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC51,38■■■■■ 5,82
Abca8bQ8K440 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC51,32■■■■■ 5,81
Abca8bQ8K440 Gm23366-201ENSMUST00000175022 89 ntBASIC51■■■■■ 5,75
Abca8bQ8K440 AC153911.1-202ENSMUST00000218534 1034 ntBASIC50■■■■■ 5,59
Abca8bQ8K440 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC49,55■■■■■ 5,52
Abca8bQ8K440 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC49,48■■■■■ 5,51
Abca8bQ8K440 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC49,46■■■■■ 5,51
Abca8bQ8K440 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC49,31■■■■■ 5,48
Abca8bQ8K440 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC49,05■■■■■ 5,44
Abca8bQ8K440 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC48,91■■■■■ 5,42
Abca8bQ8K440 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC48,8■■■■■ 5,4
Abca8bQ8K440 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC48,77■■■■■ 5,4
Abca8bQ8K440 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC48,63■■■■■ 5,38
Abca8bQ8K440 Gm25238-201ENSMUST00000174914 89 ntBASIC48,54■■■■■ 5,36
Abca8bQ8K440 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC48,52■■■■■ 5,36
Abca8bQ8K440 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC48,4■■■■■ 5,34
Abca8bQ8K440 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC47,91■■■■■ 5,26
Abca8bQ8K440 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC47,68■■■■■ 5,22
Abca8bQ8K440 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC47,52■■■■■ 5,2
Abca8bQ8K440 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC47,44■■■■■ 5,18
Abca8bQ8K440 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC47,41■■■■■ 5,18
Abca8bQ8K440 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC47,32■■■■■ 5,17
Abca8bQ8K440 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC47,3■■■■■ 5,16
Abca8bQ8K440 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC47,19■■■■■ 5,14
Abca8bQ8K440 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC47,07■■■■■ 5,13
Abca8bQ8K440 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC47,03■■■■■ 5,12
Abca8bQ8K440 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC47■■■■■ 5,12
Abca8bQ8K440 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC46,94■■■■■ 5,11
Abca8bQ8K440 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC46,93■■■■■ 5,1
Abca8bQ8K440 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC46,8■■■■■ 5,08
Abca8bQ8K440 Gm25262-201ENSMUST00000174934 133 ntBASIC46,64■■■■■ 5,06
Abca8bQ8K440 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC46,44■■■■■ 5,03
Abca8bQ8K440 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC46,29■■■■■ 5
Abca8bQ8K440 Gm27325-201ENSMUST00000175467 74 ntBASIC46,28■■■■■ 5
Abca8bQ8K440 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC46,21■■■■■ 4,99
Abca8bQ8K440 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC46,11■■■■■ 4,97
Abca8bQ8K440 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC46,02■■■■■ 4,96
Abca8bQ8K440 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC46■■■■■ 4,95
Abca8bQ8K440 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC45,96■■■■■ 4,95
Abca8bQ8K440 Rab21-202ENSMUST00000218831 843 ntBASIC45,84■■■■■ 4,93
Abca8bQ8K440 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC45,77■■■■■ 4,92
Abca8bQ8K440 Gm26115-201ENSMUST00000175605 87 ntBASIC45,76■■■■■ 4,92
Abca8bQ8K440 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC45,71■■■■■ 4,91
Abca8bQ8K440 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC45,7■■■■■ 4,91
Abca8bQ8K440 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC45,59■■■■■ 4,89
Abca8bQ8K440 Gm8109-201ENSMUST00000194076 746 ntBASIC45,59■■■■■ 4,89
Abca8bQ8K440 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC45,55■■■■■ 4,88
Abca8bQ8K440 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC45,51■■■■■ 4,88
Abca8bQ8K440 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC45,5■■■■■ 4,87
Abca8bQ8K440 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC45,47■■■■■ 4,87
Abca8bQ8K440 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC45,41■■■■■ 4,86
Abca8bQ8K440 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC45,41■■■■■ 4,86
Abca8bQ8K440 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC45,41■■■■■ 4,86
Abca8bQ8K440 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC45,26■■■■■ 4,84
Abca8bQ8K440 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC45,08■■■■■ 4,81
Abca8bQ8K440 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC45,06■■■■■ 4,8
Abca8bQ8K440 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC44,94■■■■■ 4,79
Abca8bQ8K440 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC44,92■■■■■ 4,78
Abca8bQ8K440 Psd-208ENSMUST00000224556 2034 ntBASIC44,74■■■■■ 4,75
Abca8bQ8K440 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC44,74■■■■■ 4,75
Abca8bQ8K440 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC44,68■■■■■ 4,74
Abca8bQ8K440 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC44,67■■■■■ 4,74
Abca8bQ8K440 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC44,66■■■■■ 4,74
Abca8bQ8K440 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC44,63■■■■■ 4,73
Abca8bQ8K440 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC44,58■■■■■ 4,73
Abca8bQ8K440 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC44,54■■■■■ 4,72
Abca8bQ8K440 Gm17082-201ENSMUST00000166043 1091 ntBASIC44,52■■■■■ 4,72
Abca8bQ8K440 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC44,46■■■■■ 4,71
Abca8bQ8K440 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC44,4■■■■■ 4,7
Abca8bQ8K440 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC44,39■■■■■ 4,7
Abca8bQ8K440 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC44,38■■■■■ 4,7
Abca8bQ8K440 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC44,36■■■■■ 4,69
Abca8bQ8K440 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC44,23■■■■■ 4,67
Abca8bQ8K440 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC44,13■■■■■ 4,66
Abca8bQ8K440 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC44,11■■■■■ 4,65
Abca8bQ8K440 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC44,11■■■■■ 4,65
Abca8bQ8K440 Gm24804-201ENSMUST00000174982 85 ntBASIC44,05■■■■■ 4,64
Abca8bQ8K440 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC44■■■■■ 4,63
Abca8bQ8K440 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC43,9■■■■■ 4,62
Abca8bQ8K440 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC43,81■■■■■ 4,6
Abca8bQ8K440 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC43,8■■■■■ 4,6
Abca8bQ8K440 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC43,8■■■■■ 4,6
Abca8bQ8K440 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC43,78■■■■■ 4,6
Abca8bQ8K440 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC43,76■■■■■ 4,6
Abca8bQ8K440 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC43,75■■■■■ 4,59
Abca8bQ8K440 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC43,73■■■■■ 4,59
Abca8bQ8K440 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC43,69■■■■■ 4,58
Abca8bQ8K440 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC43,69■■■■■ 4,58
Abca8bQ8K440 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC43,64■■■■■ 4,58
Abca8bQ8K440 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC43,61■■■■■ 4,57
Abca8bQ8K440 Gm27322-201ENSMUST00000184007 104 ntBASIC43,6■■■■■ 4,57
Abca8bQ8K440 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC43,6■■■■■ 4,57
Retrieved 100 of 76,532 protein–RNA pairs in 12,7 ms