Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Gm25239-201ENSMUST00000174915 86 ntBASIC61.25■■■■■ 7.4
Abca8bQ8K440 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC57.06■■■■■ 6.72
Abca8bQ8K440 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC55.83■■■■■ 6.53
Abca8bQ8K440 Gm24109-201ENSMUST00000175489 103 ntBASIC53.59■■■■■ 6.17
Abca8bQ8K440 Gm15042-201ENSMUST00000120212 883 ntBASIC52.99■■■■■ 6.07
Abca8bQ8K440 Gm15045-201ENSMUST00000117359 883 ntBASIC51.93■■■■■ 5.9
Abca8bQ8K440 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC51.82■■■■■ 5.89
Abca8bQ8K440 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC51.45■■■■■ 5.83
Abca8bQ8K440 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC51.38■■■■■ 5.82
Abca8bQ8K440 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC51.32■■■■■ 5.81
Abca8bQ8K440 Gm23366-201ENSMUST00000175022 89 ntBASIC51■■■■■ 5.75
Abca8bQ8K440 AC153911.1-202ENSMUST00000218534 1034 ntBASIC50■■■■■ 5.59
Abca8bQ8K440 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC49.55■■■■■ 5.52
Abca8bQ8K440 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC49.48■■■■■ 5.51
Abca8bQ8K440 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC49.46■■■■■ 5.51
Abca8bQ8K440 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC49.31■■■■■ 5.48
Abca8bQ8K440 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC49.05■■■■■ 5.44
Abca8bQ8K440 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC48.91■■■■■ 5.42
Abca8bQ8K440 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC48.8■■■■■ 5.4
Abca8bQ8K440 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC48.77■■■■■ 5.4
Abca8bQ8K440 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC48.63■■■■■ 5.38
Abca8bQ8K440 Gm25238-201ENSMUST00000174914 89 ntBASIC48.54■■■■■ 5.36
Abca8bQ8K440 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC48.52■■■■■ 5.36
Abca8bQ8K440 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC48.4■■■■■ 5.34
Abca8bQ8K440 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC47.91■■■■■ 5.26
Abca8bQ8K440 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC47.68■■■■■ 5.22
Abca8bQ8K440 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC47.52■■■■■ 5.2
Abca8bQ8K440 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC47.44■■■■■ 5.18
Abca8bQ8K440 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC47.41■■■■■ 5.18
Abca8bQ8K440 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC47.32■■■■■ 5.17
Abca8bQ8K440 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC47.3■■■■■ 5.16
Abca8bQ8K440 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC47.19■■■■■ 5.14
Abca8bQ8K440 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC47.07■■■■■ 5.13
Abca8bQ8K440 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC47.03■■■■■ 5.12
Abca8bQ8K440 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC47■■■■■ 5.12
Abca8bQ8K440 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC46.94■■■■■ 5.11
Abca8bQ8K440 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC46.93■■■■■ 5.1
Abca8bQ8K440 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC46.8■■■■■ 5.08
Abca8bQ8K440 Gm25262-201ENSMUST00000174934 133 ntBASIC46.64■■■■■ 5.06
Abca8bQ8K440 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC46.44■■■■■ 5.03
Abca8bQ8K440 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC46.29■■■■■ 5
Abca8bQ8K440 Gm27325-201ENSMUST00000175467 74 ntBASIC46.28■■■■■ 5
Abca8bQ8K440 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC46.21■■■■■ 4.99
Abca8bQ8K440 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC46.11■■■■■ 4.97
Abca8bQ8K440 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC46.02■■■■■ 4.96
Abca8bQ8K440 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC46■■■■■ 4.95
Abca8bQ8K440 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC45.96■■■■■ 4.95
Abca8bQ8K440 Rab21-202ENSMUST00000218831 843 ntBASIC45.84■■■■■ 4.93
Abca8bQ8K440 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC45.77■■■■■ 4.92
Abca8bQ8K440 Gm26115-201ENSMUST00000175605 87 ntBASIC45.76■■■■■ 4.92
Abca8bQ8K440 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC45.71■■■■■ 4.91
Abca8bQ8K440 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC45.7■■■■■ 4.91
Abca8bQ8K440 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC45.59■■■■■ 4.89
Abca8bQ8K440 Gm8109-201ENSMUST00000194076 746 ntBASIC45.59■■■■■ 4.89
Abca8bQ8K440 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC45.55■■■■■ 4.88
Abca8bQ8K440 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC45.51■■■■■ 4.88
Abca8bQ8K440 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC45.5■■■■■ 4.87
Abca8bQ8K440 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC45.47■■■■■ 4.87
Abca8bQ8K440 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC45.41■■■■■ 4.86
Abca8bQ8K440 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC45.41■■■■■ 4.86
Abca8bQ8K440 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC45.41■■■■■ 4.86
Abca8bQ8K440 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC45.26■■■■■ 4.84
Abca8bQ8K440 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC45.08■■■■■ 4.81
Abca8bQ8K440 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC45.06■■■■■ 4.8
Abca8bQ8K440 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC44.94■■■■■ 4.79
Abca8bQ8K440 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC44.92■■■■■ 4.78
Abca8bQ8K440 Psd-208ENSMUST00000224556 2034 ntBASIC44.74■■■■■ 4.75
Abca8bQ8K440 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC44.74■■■■■ 4.75
Abca8bQ8K440 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC44.68■■■■■ 4.74
Abca8bQ8K440 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC44.67■■■■■ 4.74
Abca8bQ8K440 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC44.66■■■■■ 4.74
Abca8bQ8K440 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC44.63■■■■■ 4.73
Abca8bQ8K440 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC44.58■■■■■ 4.73
Abca8bQ8K440 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC44.54■■■■■ 4.72
Abca8bQ8K440 Gm17082-201ENSMUST00000166043 1091 ntBASIC44.52■■■■■ 4.72
Abca8bQ8K440 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC44.46■■■■■ 4.71
Abca8bQ8K440 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC44.4■■■■■ 4.7
Abca8bQ8K440 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC44.39■■■■■ 4.7
Abca8bQ8K440 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC44.38■■■■■ 4.7
Abca8bQ8K440 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC44.36■■■■■ 4.69
Abca8bQ8K440 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC44.23■■■■■ 4.67
Abca8bQ8K440 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC44.13■■■■■ 4.66
Abca8bQ8K440 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC44.11■■■■■ 4.65
Abca8bQ8K440 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC44.11■■■■■ 4.65
Abca8bQ8K440 Gm24804-201ENSMUST00000174982 85 ntBASIC44.05■■■■■ 4.64
Abca8bQ8K440 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC44■■■■■ 4.63
Abca8bQ8K440 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC43.9■■■■■ 4.62
Abca8bQ8K440 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC43.81■■■■■ 4.6
Abca8bQ8K440 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC43.8■■■■■ 4.6
Abca8bQ8K440 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC43.8■■■■■ 4.6
Abca8bQ8K440 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC43.78■■■■■ 4.6
Abca8bQ8K440 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC43.76■■■■■ 4.6
Abca8bQ8K440 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC43.75■■■■■ 4.59
Abca8bQ8K440 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC43.73■■■■■ 4.59
Abca8bQ8K440 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC43.69■■■■■ 4.58
Abca8bQ8K440 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC43.69■■■■■ 4.58
Abca8bQ8K440 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC43.64■■■■■ 4.58
Abca8bQ8K440 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC43.61■■■■■ 4.57
Abca8bQ8K440 Gm27322-201ENSMUST00000184007 104 ntBASIC43.6■■■■■ 4.57
Abca8bQ8K440 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC43.6■■■■■ 4.57
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms