RNA–Protein interactions for RNA: ENSMUST00000161455.7

Ctc1-211, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Ctc1, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-211ENSMUST00000161455 Mug2P28666 1451 aa13.58□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Zranb1Q7M760 708 aa13.58□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Kif13aQ9EQW7 1749 aa13.58□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Mroh1E0CZ22 1640 aa13.58□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Bcl9Q9D219 1425 aa13.57□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Slc4a1apE9PX68 744 aa13.57□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Myo3aQ8K3H5 1613 aa13.57□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Cdk19Q8BWD8 501 aa13.57□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Slain2Q8CI08 581 aa13.57□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Rims2Q9EQZ7 1530 aa13.57□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Rtn4Q99P72 1162 aaKnown RBP13.56□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Lrrc7Q80TE7 1490 aa13.56□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Gsto1O09131 240 aa13.56□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Ggt6Q6PDE7 497 aa13.55□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Ehbp1l1Q99MS7 1716 aa13.54□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Ccdc9Q8VC31 543 aaKnown RBP13.54□□□□□ -0.24
Ctc1-211ENSMUST00000161455 PalldQ9ET54 1408 aa13.54□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Uggt1Q6P5E4 1551 aa13.54□□□□□ -0.24
Ctc1-211ENSMUST00000161455 GnpatP98192 678 aa13.54□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Abca8aQ8K442 1620 aa13.53□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Cpsf1Q9EPU4 1441 aaKnown RBP13.52□□□□□ -0.24
Ctc1-211ENSMUST00000161455 Ncoa1P70365 1447 aa13.52□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Anp32bQ9EST5 272 aaKnown RBP13.51□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Adamts13Q769J6 1426 aa13.51□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Znf710Q3U288 666 aa13.51□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Scn4aQ9ER60 1841 aa13.51□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Pak3Q61036 559 aa13.5□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Rims1Q99NE5 1463 aa13.5□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Taok2Q6ZQ29 1240 aa13.5□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Arhgef28P97433 1693 aa13.49□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Dip2aQ8BWT5 1523 aa13.49□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Gimap5Q8BWF2 308 aa13.49□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Itsn1Q9Z0R4 1714 aa13.49□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Pank3Q8R2W9 370 aa13.48□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Dcaf11Q91VU6 549 aa13.47□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Tns3Q5SSZ5 1440 aa13.47□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Chd2E9PZM4 1827 aaKnown RBP13.47□□□□□ -0.25
Ctc1-211ENSMUST00000161455 RalgapbQ8BQZ4 1484 aa13.47□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Inpp5dQ9ES52 1191 aa13.47□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Tmf1B9EKI3 1091 aa13.47□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Fyb1O35601 819 aa13.47□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Rimbp3Q3V0F0 1606 aa13.46□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Tom1O88746 492 aa13.46□□□□□ -0.25
Ctc1-211ENSMUST00000161455 Nlrp6Q91WS2 869 aa13.45□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Calr4Q3TQS0 420 aa13.45□□□□□ -0.26
Ctc1-211ENSMUST00000161455 FanciQ8K368 1330 aa13.45□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Birc3O08863 600 aa13.45□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Hspa1lP16627 641 aa13.45□□□□□ -0.26
Ctc1-211ENSMUST00000161455 TimelessQ9R1X4 1197 aa13.45□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Fam184bQ0KK56 942 aa13.44□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Ddx17Q501J6 650 aaKnown RBP13.44□□□□□ -0.26
Ctc1-211ENSMUST00000161455 PplQ9R269 1755 aa13.44□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Farp2Q91VS8 1065 aa13.44□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Zc3h13E9Q784 1729 aaKnown RBP13.44□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Cep152A2AUM9 1736 aaKnown RBP13.43□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Gemin5Q8BX17 1502 aaKnown RBP13.43□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Plxnc1Q9QZC2 1574 aa13.43□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Pik3r4Q8VD65 1358 aa13.43□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Nphp4P59240 1425 aa13.43□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Idi1P58044 227 aa13.43□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Hsp90aa1P07901 733 aaKnown RBP13.42□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Egfem1Q8C088 590 aa13.42□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Znf692Q3U381 531 aa13.41□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Cep170bQ80U49 1574 aa13.41□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Gm21190A0A0G2JGJ6 266 aa13.41□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Cabp4Q8VHC5 271 aa13.4□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Nrxn3Q6P9K9 1571 aa13.4□□□□□ -0.26
Ctc1-211ENSMUST00000161455 Ttll13A4Q9F6 804 aa13.39□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Iqgap1Q9JKF1 1657 aaKnown RBP13.39□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Mbd5B1AYB6 1498 aa13.39□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Ddx54Q8K4L0 874 aaKnown RBP13.39□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Acsbg1Q99PU5 721 aa13.39□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Brinp3Q499E0 766 aa13.38□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Eif2ak4Q9QZ05 1648 aa13.38□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Prdm2A2A7B5 1709 aaKnown RBP13.38□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Liat1Q810M6 228 aa13.38□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Slc5a4bQ91ZP4 660 aa13.38□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Chrna2Q91X60 512 aa13.37□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Ppp4r2Q0VGB7 417 aa13.37□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Slit3Q9WVB4 1523 aa13.37□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Zscan10Q3URR7 782 aa13.36□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Sirt1Q923E4 737 aa13.36□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Med1Q925J9 1575 aa13.36□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Kif16bB1AVY7 1312 aa13.36□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Plekhg1F6S200 1446 aa13.36□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Eif5bQ05D44 1216 aaKnown RBP13.35□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Idi2Q8BFZ6 227 aa13.35□□□□□ -0.27
Ctc1-211ENSMUST00000161455 PrxO55103 1391 aa13.35□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Rbm10Q99KG3 930 aaKnown RBP13.34□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Qtrt2B8ZXI1 415 aa13.34□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Kif7B7ZNG0 1348 aa13.34□□□□□ -0.27
Ctc1-211ENSMUST00000161455 HdgfP51859 237 aaKnown RBP13.33□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Wwc2Q6NXJ0 1187 aa13.33□□□□□ -0.27
Ctc1-211ENSMUST00000161455 Amigo3Q8C2S7 508 aa13.33□□□□□ -0.27
Ctc1-211ENSMUST00000161455 DmtnQ9WV69 405 aa13.33□□□□□ -0.27
Ctc1-211ENSMUST00000161455 InsrP15208 1372 aa13.33□□□□□ -0.28
Ctc1-211ENSMUST00000161455 Ltbp4Q8K4G1 1666 aa13.33□□□□□ -0.28
Ctc1-211ENSMUST00000161455 Mrs2Q5NCE8 434 aa13.32□□□□□ -0.28
Ctc1-211ENSMUST00000161455 Cdk5rap2Q8K389 1822 aa13.32□□□□□ -0.28
Ctc1-211ENSMUST00000161455 Map3k19E9Q3S4 1311 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms