RNA–Protein interactions for RNA: ENSMUST00000161455.7

Ctc1-211, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Ctc1, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-211ENSMUST00000161455 NischQ80TM9 1593 aa20.57■□□□□ 0.88
Ctc1-211ENSMUST00000161455 Gm35339A0A140LHH9 1649 aa20.15■□□□□ 0.82
Ctc1-211ENSMUST00000161455 Abcc9P70170 1546 aa19.74■□□□□ 0.75
Ctc1-211ENSMUST00000161455 Abcc8B2RUS7 1588 aa19.63■□□□□ 0.73
Ctc1-211ENSMUST00000161455 Rhox8Q6VSS7 320 aa19.02■□□□□ 0.63
Ctc1-211ENSMUST00000161455 ScribQ80U72 1612 aa18.66■□□□□ 0.58
Ctc1-211ENSMUST00000161455 NacadQ5SWP3 1504 aa18.31■□□□□ 0.52
Ctc1-211ENSMUST00000161455 Kdm5dQ62240 1548 aa18.29■□□□□ 0.52
Ctc1-211ENSMUST00000161455 Rb1cc1Q9ESK9 1588 aa17.97■□□□□ 0.47
Ctc1-211ENSMUST00000161455 Dcaf1Q80TR8 1506 aa17.97■□□□□ 0.47
Ctc1-211ENSMUST00000161455 Sycp2Q9CUU3 1500 aa17.87■□□□□ 0.45
Ctc1-211ENSMUST00000161455 Zcchc6Q5BLK4 1491 aaKnown RBP17.8■□□□□ 0.44
Ctc1-211ENSMUST00000161455 Baz1aO88379 1555 aa17.65■□□□□ 0.42
Ctc1-211ENSMUST00000161455 Ccdc136Q3TVA9 1136 aa17.64■□□□□ 0.41
Ctc1-211ENSMUST00000161455 BicraF8VPZ9 1578 aa17.49■□□□□ 0.39
Ctc1-211ENSMUST00000161455 Crybg2B7ZCC2 1516 aa17.33■□□□□ 0.36
Ctc1-211ENSMUST00000161455 Esf1Q3V1V3 845 aaKnown RBP17.26■□□□□ 0.35
Ctc1-211ENSMUST00000161455 Ccdc180J3QNE4 1664 aa17.25■□□□□ 0.35
Ctc1-211ENSMUST00000161455 Pds5bQ4VA53 1446 aaKnown RBP17.21■□□□□ 0.35
Ctc1-211ENSMUST00000161455 Trim41Q5NCC3 630 aa17.16■□□□□ 0.34
Ctc1-211ENSMUST00000161455 Cecr2E9Q2Z1 1453 aa17.12■□□□□ 0.33
Ctc1-211ENSMUST00000161455 Rtl1Q7M732 1744 aa17.11■□□□□ 0.33
Ctc1-211ENSMUST00000161455 Smarca2Q6DIC0 1577 aa17.07■□□□□ 0.32
Ctc1-211ENSMUST00000161455 Atad2bE9Q166 1460 aaKnown RBP17.05■□□□□ 0.32
Ctc1-211ENSMUST00000161455 Dnajc5bQ9CQ94 199 aa17.04■□□□□ 0.32
Ctc1-211ENSMUST00000161455 Cngb1E1AZ71 1325 aa17.01■□□□□ 0.31
Ctc1-211ENSMUST00000161455 Ercc6F8VPZ5 1481 aa16.99■□□□□ 0.31
Ctc1-211ENSMUST00000161455 Smarca4Q3TKT4 1613 aaKnown RBP16.96■□□□□ 0.31
Ctc1-211ENSMUST00000161455 Brd4Q9ESU6 1400 aaKnown RBP16.95■□□□□ 0.3
Ctc1-211ENSMUST00000161455 Iqgap2Q3UQ44 1575 aa16.86■□□□□ 0.29
Ctc1-211ENSMUST00000161455 Ubl4bQ9CQ84 188 aa16.84■□□□□ 0.29
Ctc1-211ENSMUST00000161455 CftrP26361 1476 aa16.75■□□□□ 0.27
Ctc1-211ENSMUST00000161455 Synj1Q8CHC4 1574 aa16.73■□□□□ 0.27
Ctc1-211ENSMUST00000161455 Il27Q8K3I6 234 aa16.7■□□□□ 0.26
Ctc1-211ENSMUST00000161455 Frmpd1A2AKB4 1549 aa16.65■□□□□ 0.26
Ctc1-211ENSMUST00000161455 Cc2d2aQ8CFW7 1633 aa16.65■□□□□ 0.26
Ctc1-211ENSMUST00000161455 Phldb1Q6PDH0 1371 aaKnown RBP16.65■□□□□ 0.26
Ctc1-211ENSMUST00000161455 Thoc2B1AZI6 1594 aaKnown RBP16.63■□□□□ 0.25
Ctc1-211ENSMUST00000161455 Cttnbp2B9EJA2 1648 aa16.62■□□□□ 0.25
Ctc1-211ENSMUST00000161455 Rpgrip1Q9EPQ2 1331 aa16.6■□□□□ 0.25
Ctc1-211ENSMUST00000161455 Wdr62Q3U3T8 1523 aa16.58■□□□□ 0.25
Ctc1-211ENSMUST00000161455 Npm1Q61937 292 aaKnown RBP16.53■□□□□ 0.24
Ctc1-211ENSMUST00000161455 Kif15Q6P9L6 1387 aa16.52■□□□□ 0.24
Ctc1-211ENSMUST00000161455 Rsf1E9PWW9 1441 aaKnown RBP16.49■□□□□ 0.23
Ctc1-211ENSMUST00000161455 Golga3P55937 1487 aa16.42■□□□□ 0.22
Ctc1-211ENSMUST00000161455 Pcgf6Q99NA9 353 aa16.38■□□□□ 0.21
Ctc1-211ENSMUST00000161455 Gab3Q8BSM5 595 aa16.38■□□□□ 0.21
Ctc1-211ENSMUST00000161455 Fam135aQ6NS59 1506 aa16.37■□□□□ 0.21
Ctc1-211ENSMUST00000161455 Cux2P70298 1426 aa16.35■□□□□ 0.21
Ctc1-211ENSMUST00000161455 Zeb1Q64318 1117 aa16.31■□□□□ 0.2
Ctc1-211ENSMUST00000161455 Npm2Q80W85 207 aa16.27■□□□□ 0.2
Ctc1-211ENSMUST00000161455 Chic1Q8CBW7 227 aa16.27■□□□□ 0.2
Ctc1-211ENSMUST00000161455 Mrc2Q64449 1479 aa16.27■□□□□ 0.2
Ctc1-211ENSMUST00000161455 Ccdc18Q640L5 1455 aa16.19■□□□□ 0.18
Ctc1-211ENSMUST00000161455 Cep164Q5DU05 1446 aa16.19■□□□□ 0.18
Ctc1-211ENSMUST00000161455 Unc13aQ4KUS2 1712 aa16.17■□□□□ 0.18
Ctc1-211ENSMUST00000161455 HrcG5E8J6 738 aa16.12■□□□□ 0.17
Ctc1-211ENSMUST00000161455 Fmn1Q05860 1466 aa16.12■□□□□ 0.17
Ctc1-211ENSMUST00000161455 Ccdc88bQ4QRL3 1481 aa16.11■□□□□ 0.17
Ctc1-211ENSMUST00000161455 Myt1lP97500 1187 aa16.09■□□□□ 0.17
Ctc1-211ENSMUST00000161455 Lamc3Q9R0B6 1581 aa16.04■□□□□ 0.16
Ctc1-211ENSMUST00000161455 Baz1bQ9Z277 1479 aa16.04■□□□□ 0.16
Ctc1-211ENSMUST00000161455 Top2bQ64511 1612 aa16.03■□□□□ 0.16
Ctc1-211ENSMUST00000161455 Dhx29Q6PGC1 1365 aaKnown RBP16.01■□□□□ 0.15
Ctc1-211ENSMUST00000161455 LrpprcQ6PB66 1392 aaKnown RBP16■□□□□ 0.15
Ctc1-211ENSMUST00000161455 Acin1Q9JIX8 1338 aaKnown RBP15.94■□□□□ 0.14
Ctc1-211ENSMUST00000161455 Camsap1A2AHC3 1581 aa15.89■□□□□ 0.13
Ctc1-211ENSMUST00000161455 Kif21aQ9QXL2 1672 aa15.88■□□□□ 0.13
Ctc1-211ENSMUST00000161455 Urb2E9Q7L1 1524 aaKnown RBP15.88■□□□□ 0.13
Ctc1-211ENSMUST00000161455 Pelp1Q9DBD5 1123 aaKnown RBP15.86■□□□□ 0.13
Ctc1-211ENSMUST00000161455 DiexfQ8BTT6 772 aaKnown RBP15.85■□□□□ 0.13
Ctc1-211ENSMUST00000161455 Plb1Q3TTY0 1478 aa15.83■□□□□ 0.13
Ctc1-211ENSMUST00000161455 TnnQ80Z71 1560 aa15.82■□□□□ 0.12
Ctc1-211ENSMUST00000161455 PogzQ8BZH4 1409 aaKnown RBP15.81■□□□□ 0.12
Ctc1-211ENSMUST00000161455 Duox2A2AQ99 1517 aa15.8■□□□□ 0.12
Ctc1-211ENSMUST00000161455 Neurod1Q60867 357 aa15.77■□□□□ 0.11
Ctc1-211ENSMUST00000161455 Crocc2F6XLV1 1638 aa15.76■□□□□ 0.11
Ctc1-211ENSMUST00000161455 Grin2bQ01097 1482 aa15.76■□□□□ 0.11
Ctc1-211ENSMUST00000161455 Lrriq1Q0P5X1 1673 aa15.76■□□□□ 0.11
Ctc1-211ENSMUST00000161455 Top2aQ01320 1528 aaKnown RBP15.74■□□□□ 0.11
Ctc1-211ENSMUST00000161455 Rad54l2Q99NG0 1466 aa15.7■□□□□ 0.1
Ctc1-211ENSMUST00000161455 Efcab5A0JP43 1406 aa15.69■□□□□ 0.1
Ctc1-211ENSMUST00000161455 Ap3b1Q9Z1T1 1105 aa15.68■□□□□ 0.1
Ctc1-211ENSMUST00000161455 PtprkP35822 1457 aa15.67■□□□□ 0.1
Ctc1-211ENSMUST00000161455 CenpbP27790 599 aa15.65■□□□□ 0.1
Ctc1-211ENSMUST00000161455 Shroom4Q1W617 1475 aa15.63■□□□□ 0.09
Ctc1-211ENSMUST00000161455 Ift140E9PY46 1464 aa15.62■□□□□ 0.09
Ctc1-211ENSMUST00000161455 1700123L14RikQ3V2K7 440 aa15.62■□□□□ 0.09
Ctc1-211ENSMUST00000161455 NrkQ9R0G8 1455 aa15.62■□□□□ 0.09
Ctc1-211ENSMUST00000161455 Arhgap27A2AB59 869 aa15.61■□□□□ 0.09
Ctc1-211ENSMUST00000161455 Myt1Q8CFC2 1127 aa15.61■□□□□ 0.09
Ctc1-211ENSMUST00000161455 Fkbp15Q6P9Q6 1216 aaKnown RBP15.6■□□□□ 0.09
Ctc1-211ENSMUST00000161455 Ifnlr1Q8CGK5 535 aa15.6■□□□□ 0.09
Ctc1-211ENSMUST00000161455 Rapgef2Q8CHG7 1496 aa15.6■□□□□ 0.09
Ctc1-211ENSMUST00000161455 Las1lA2BE28 776 aaKnown RBP15.57■□□□□ 0.08
Ctc1-211ENSMUST00000161455 Ehmt2Q9Z148 1263 aaKnown RBP15.57■□□□□ 0.08
Ctc1-211ENSMUST00000161455 Pabpn1Q8CCS6 302 aaKnown RBP15.56■□□□□ 0.08
Ctc1-211ENSMUST00000161455 AknaQ80VW7 1404 aa15.55■□□□□ 0.08
Ctc1-211ENSMUST00000161455 Bcl11aQ9QYE3 773 aa15.55■□□□□ 0.08
Ctc1-211ENSMUST00000161455 Samd9lQ69Z37 1561 aa15.54■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms