RNA–Protein interactions for RNA: ENSMUST00000111198.8

Cd44-208, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-208ENSMUST00000111198 MaddQ80U28 1577 aa10.89□□□□□ -0.67
Cd44-208ENSMUST00000111198 Gimap5Q8BWF2 308 aa10.89□□□□□ -0.67
Cd44-208ENSMUST00000111198 Nwd1A6H603 1563 aa10.88□□□□□ -0.67
Cd44-208ENSMUST00000111198 Col14a1Q80X19 1797 aa10.88□□□□□ -0.67
Cd44-208ENSMUST00000111198 Rims1Q99NE5 1463 aa10.87□□□□□ -0.67
Cd44-208ENSMUST00000111198 Washc2Q6PGL7 1334 aa10.86□□□□□ -0.67
Cd44-208ENSMUST00000111198 Ift172Q6VH22 1749 aa10.86□□□□□ -0.67
Cd44-208ENSMUST00000111198 Tmem94Q7TSH8 1360 aa10.86□□□□□ -0.67
Cd44-208ENSMUST00000111198 HnrnpmQ9D0E1 729 aaKnown RBP10.86□□□□□ -0.67
Cd44-208ENSMUST00000111198 Cps1Q8C196 1500 aa10.86□□□□□ -0.67
Cd44-208ENSMUST00000111198 Rock1P70335 1354 aa10.85□□□□□ -0.67
Cd44-208ENSMUST00000111198 NalcnQ8BXR5 1738 aa10.85□□□□□ -0.67
Cd44-208ENSMUST00000111198 Tulp4Q9JIL5 1547 aa10.84□□□□□ -0.67
Cd44-208ENSMUST00000111198 Atf3Q60765 181 aa10.84□□□□□ -0.67
Cd44-208ENSMUST00000111198 Dapk1Q80YE7 1442 aa10.84□□□□□ -0.67
Cd44-208ENSMUST00000111198 Ttll13A4Q9F6 804 aa10.83□□□□□ -0.68
Cd44-208ENSMUST00000111198 Slc52a2Q9D8F3 450 aa10.83□□□□□ -0.68
Cd44-208ENSMUST00000111198 Kif20bQ80WE4 1774 aaKnown RBP10.82□□□□□ -0.68
Cd44-208ENSMUST00000111198 Slc5a4bQ91ZP4 660 aa10.81□□□□□ -0.68
Cd44-208ENSMUST00000111198 Itsn2Q9Z0R6 1659 aa10.81□□□□□ -0.68
Cd44-208ENSMUST00000111198 Nyap1Q6PFX7 833 aa10.81□□□□□ -0.68
Cd44-208ENSMUST00000111198 C3P01027 1663 aa10.81□□□□□ -0.68
Cd44-208ENSMUST00000111198 Cep152A2AUM9 1736 aaKnown RBP10.8□□□□□ -0.68
Cd44-208ENSMUST00000111198 Adamts13Q769J6 1426 aa10.8□□□□□ -0.68
Cd44-208ENSMUST00000111198 Fbln2P37889 1221 aa10.8□□□□□ -0.68
Cd44-208ENSMUST00000111198 Rreb1Q3UH06 1700 aaKnown RBP10.8□□□□□ -0.68
Cd44-208ENSMUST00000111198 Qtrt2B8ZXI1 415 aa10.79□□□□□ -0.68
Cd44-208ENSMUST00000111198 Stra8P70278 393 aa10.79□□□□□ -0.68
Cd44-208ENSMUST00000111198 Utp14aQ640M1 767 aaKnown RBP10.79□□□□□ -0.68
Cd44-208ENSMUST00000111198 KdrP35918 1367 aa10.78□□□□□ -0.68
Cd44-208ENSMUST00000111198 Usp47Q8BY87 1376 aa10.78□□□□□ -0.68
Cd44-208ENSMUST00000111198 D430041D05RikF6ZGR6 1678 aa10.78□□□□□ -0.68
Cd44-208ENSMUST00000111198 Zfp142G5E869 1843 aa10.77□□□□□ -0.68
Cd44-208ENSMUST00000111198 Cdk5rap2Q8K389 1822 aa10.77□□□□□ -0.68
Cd44-208ENSMUST00000111198 Srpk2O54781 681 aaKnown RBP10.77□□□□□ -0.68
Cd44-208ENSMUST00000111198 Stk26Q99JT2 416 aa10.77□□□□□ -0.68
Cd44-208ENSMUST00000111198 Slit2Q9R1B9 1521 aa10.77□□□□□ -0.68
Cd44-208ENSMUST00000111198 Pik3c2bE9QAN8 1632 aa10.77□□□□□ -0.69
Cd44-208ENSMUST00000111198 Ifit1bl1D3Z6F0 470 aa10.77□□□□□ -0.69
Cd44-208ENSMUST00000111198 PrkcshO08795 521 aa10.77□□□□□ -0.69
Cd44-208ENSMUST00000111198 Kdm2aP59997 1161 aa10.77□□□□□ -0.69
Cd44-208ENSMUST00000111198 Rgl3Q3UYI5 709 aa10.77□□□□□ -0.69
Cd44-208ENSMUST00000111198 Usp32F8VPZ3 1604 aa10.76□□□□□ -0.69
Cd44-208ENSMUST00000111198 Fan1Q69ZT1 1020 aa10.76□□□□□ -0.69
Cd44-208ENSMUST00000111198 Wnk3Q80XP9 1757 aa10.76□□□□□ -0.69
Cd44-208ENSMUST00000111198 Gm10563F6WIE4 79 aa10.76□□□□□ -0.69
Cd44-208ENSMUST00000111198 Atf5O70191 283 aa10.76□□□□□ -0.69
Cd44-208ENSMUST00000111198 DccP70211 1447 aa10.76□□□□□ -0.69
Cd44-208ENSMUST00000111198 Q3UJC8 639 aa10.76□□□□□ -0.69
Cd44-208ENSMUST00000111198 Lrrc7Q80TE7 1490 aa10.75□□□□□ -0.69
Cd44-208ENSMUST00000111198 Adgrl1Q80TR1 1466 aa10.75□□□□□ -0.69
Cd44-208ENSMUST00000111198 Sipa1l2Q80TE4 1722 aa10.75□□□□□ -0.69
Cd44-208ENSMUST00000111198 PtprvP70289 1705 aa10.75□□□□□ -0.69
Cd44-208ENSMUST00000111198 Cep170bQ80U49 1574 aa10.74□□□□□ -0.69
Cd44-208ENSMUST00000111198 Puf60Q3UEB3 564 aaKnown RBP10.74□□□□□ -0.69
Cd44-208ENSMUST00000111198 Fnbp4Q6ZQ03 1031 aa10.74□□□□□ -0.69
Cd44-208ENSMUST00000111198 Kif7B7ZNG0 1348 aa10.74□□□□□ -0.69
Cd44-208ENSMUST00000111198 Nhsl1Q8CAF4 1587 aa10.74□□□□□ -0.69
Cd44-208ENSMUST00000111198 Kif24Q6NWW5 1356 aa10.74□□□□□ -0.69
Cd44-208ENSMUST00000111198 Plekhg1F6S200 1446 aa10.74□□□□□ -0.69
Cd44-208ENSMUST00000111198 Eid3Q3V124 375 aa10.74□□□□□ -0.69
Cd44-208ENSMUST00000111198 C5P06684 1680 aa10.73□□□□□ -0.69
Cd44-208ENSMUST00000111198 Cypt2Q6P924 180 aa10.73□□□□□ -0.69
Cd44-208ENSMUST00000111198 Gm38655A0A286YDK6 273 aa10.72□□□□□ -0.69
Cd44-208ENSMUST00000111198 Gm20521D3Z5F7 333 aa10.72□□□□□ -0.69
Cd44-208ENSMUST00000111198 Stag3O70576 1240 aa10.72□□□□□ -0.69
Cd44-208ENSMUST00000111198 Ybx3Q9JKB3 361 aaKnown RBP10.72□□□□□ -0.69
Cd44-208ENSMUST00000111198 Als2Q920R0 1651 aa10.72□□□□□ -0.69
Cd44-208ENSMUST00000111198 Cntnap1O54991 1385 aa10.72□□□□□ -0.69
Cd44-208ENSMUST00000111198 Sipa1l1Q8C0T5 1782 aa10.72□□□□□ -0.69
Cd44-208ENSMUST00000111198 Sema6bO54951 886 aa10.72□□□□□ -0.69
Cd44-208ENSMUST00000111198 Kcna6Q61923 529 aa10.71□□□□□ -0.69
Cd44-208ENSMUST00000111198 Siglec1Q62230 1695 aa10.71□□□□□ -0.7
Cd44-208ENSMUST00000111198 Cypt1Q8CH20 168 aa10.7□□□□□ -0.7
Cd44-208ENSMUST00000111198 GnpatP98192 678 aa10.7□□□□□ -0.7
Cd44-208ENSMUST00000111198 Znf526Q8BI66 675 aa10.7□□□□□ -0.7
Cd44-208ENSMUST00000111198 Farp2Q91VS8 1065 aa10.7□□□□□ -0.7
Cd44-208ENSMUST00000111198 Marf1Q8BJ34 1730 aaKnown RBP10.69□□□□□ -0.7
Cd44-208ENSMUST00000111198 N4bp2F8VQG7 1678 aaKnown RBP10.69□□□□□ -0.7
Cd44-208ENSMUST00000111198 Grwd1Q810D6 446 aaKnown RBP10.69□□□□□ -0.7
Cd44-208ENSMUST00000111198 Abca14E9Q8F8 1683 aa10.69□□□□□ -0.7
Cd44-208ENSMUST00000111198 Hspa5P20029 655 aaKnown RBP10.68□□□□□ -0.7
Cd44-208ENSMUST00000111198 Ggt6Q6PDE7 497 aa10.68□□□□□ -0.7
Cd44-208ENSMUST00000111198 Bcl2l12Q9D3J3 255 aa10.68□□□□□ -0.7
Cd44-208ENSMUST00000111198 Kif1aP33173 1695 aa10.68□□□□□ -0.7
Cd44-208ENSMUST00000111198 Camta1A2A891 1682 aa10.68□□□□□ -0.7
Cd44-208ENSMUST00000111198 IqubQ8CDK3 788 aa10.68□□□□□ -0.7
Cd44-208ENSMUST00000111198 Ddx17Q501J6 650 aaKnown RBP10.67□□□□□ -0.7
Cd44-208ENSMUST00000111198 MypopQ8R4U1 393 aa10.67□□□□□ -0.7
Cd44-208ENSMUST00000111198 Tmem2Q5FWI3 1383 aa10.67□□□□□ -0.7
Cd44-208ENSMUST00000111198 Lrp6O88572 1613 aa10.66□□□□□ -0.7
Cd44-208ENSMUST00000111198 Atp2b2Q9R0K7 1198 aa10.66□□□□□ -0.7
Cd44-208ENSMUST00000111198 Anp32aO35381 247 aa10.65□□□□□ -0.7
Cd44-208ENSMUST00000111198 Polr3aB2RXC6 1390 aa10.64□□□□□ -0.71
Cd44-208ENSMUST00000111198 Idi1P58044 227 aa10.64□□□□□ -0.71
Cd44-208ENSMUST00000111198 Skap1Q3UUV5 355 aa10.64□□□□□ -0.71
Cd44-208ENSMUST00000111198 Rtl5Q5DTT4 599 aa10.64□□□□□ -0.71
Cd44-208ENSMUST00000111198 Usp40Q8BWR4 1235 aa10.64□□□□□ -0.71
Cd44-208ENSMUST00000111198 Abcc10Q8R4P9 1501 aa10.64□□□□□ -0.71
Cd44-208ENSMUST00000111198 RalgapbQ8BQZ4 1484 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms