RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Rusc2Q80U22 1514 aa9.27□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Mroh2aD3Z750 1679 aa9.27□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Gapvd1Q6PAR5 1458 aa9.27□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Tex14Q7M6U3 1450 aa9.27□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Casq1O09165 405 aa9.27□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Gm45140A0A0N4SUM8 220 aa9.26□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Ppp2r1aQ76MZ3 589 aa9.26□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Zhx1P70121 873 aa9.26□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Cluap1Q8R3P7 413 aa9.26□□□□□ -0.93
Bdnf-204ENSMUST00000111044 PrxO55103 1391 aa9.26□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Cbx1P83917 185 aaKnown RBP9.26□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Mknk2Q8CDB0 459 aa9.26□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Clstn2Q9ER65 966 aa9.25□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Polr3aB2RXC6 1390 aa9.25□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Cpsf1Q9EPU4 1441 aaKnown RBP9.25□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Tmx3Q8BXZ1 456 aa9.25□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Setd1aE9PYH6 1716 aa9.25□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Atf7ipQ7TT18 1306 aa9.25□□□□□ -0.93
Bdnf-204ENSMUST00000111044 ImpactO55091 318 aa9.25□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Cdk13Q69ZA1 1511 aaKnown RBP9.24□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Ccdc173A0JLY1 547 aa9.24□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Caskin1Q6P9K8 1431 aa9.24□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Dnajc5P60904 198 aa9.24□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Rps6ka5Q8C050 863 aa9.24□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Duxf3A0A0N4SV92 674 aa9.24□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Glipr1l2Q9CQ35 332 aa9.24□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Fancd2Q80V62 1450 aa9.24□□□□□ -0.93
Bdnf-204ENSMUST00000111044 FanciQ8K368 1330 aa9.23□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Plch2A2AP18 1501 aa9.23□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Gm973E9Q295 1059 aa9.23□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Kiaa0754Q69ZZ9 979 aa9.23□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Grpel1Q99LP6 217 aa9.23□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Trim30aP15533 496 aa9.23□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Supt6hQ62383 1726 aaKnown RBP9.22□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Dnmt1P13864 1620 aaKnown RBP9.22□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Trappc8E9PWG2 1437 aa9.22□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Hs1bp3Q3TC93 395 aa9.22□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Fam114a1Q9D281 569 aa9.22□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Mrvi1Q9WUX5 899 aaKnown RBP9.22□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Rlbp1Q9Z275 317 aa9.22□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Iqgap1Q9JKF1 1657 aaKnown RBP9.22□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Arhgap5P97393 1501 aa9.22□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Ncapd2Q8K2Z4 1392 aa9.22□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Gm10093D3YYI8 482 aa9.22□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Hdac1O09106 482 aaKnown RBP9.22□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Kdm5cP41230 1554 aa9.21□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Erich6D3Z6S9 713 aa9.21□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Bag4Q8CI61 457 aa9.21□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Gtpbp4Q99ME9 634 aaKnown RBP9.21□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Rcan3Q9JKK0 239 aa9.21□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Wdr7Q920I9 1489 aa9.21□□□□□ -0.93
Bdnf-204ENSMUST00000111044 Mindy4Q3UQI9 744 aa9.21□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Gripap1Q8VD04 806 aa9.21□□□□□ -0.94
Bdnf-204ENSMUST00000111044 4931400O07RikQ9D4M5 137 aa9.21□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Slc4a1apE9PX68 744 aa9.21□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Chmp4bQ9D8B3 224 aaKnown RBP9.21□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Kif4P33174 1231 aa9.2□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Fam135bQ9DAI6 1403 aa9.2□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Stac3Q8BZ71 360 aa9.2□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Dnajc14Q921R4 703 aa9.2□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Pank2Q3U4S0 443 aa9.2□□□□□ -0.94
Bdnf-204ENSMUST00000111044 1700010I14RikQ7TPG0 532 aa9.2□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Rbm25B2RY56 838 aaKnown RBP9.19□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Fez2Q6TYB5 348 aa9.19□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Fam184bQ0KK56 942 aa9.19□□□□□ -0.94
Bdnf-204ENSMUST00000111044 GorabQ8BRM2 368 aa9.19□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Kif18aQ91WD7 886 aa9.19□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Ssh2Q5SW75 1423 aa9.19□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Zcchc11B2RX14 1644 aaKnown RBP9.19□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Zfp251Q6PCX8 632 aa9.19□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Casc1Q6TDU8 730 aa9.19□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Zkscan1Q8BGS3 561 aaKnown RBP9.19□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Ifit1bl1D3Z6F0 470 aa9.18□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Plcd3Q8K2J0 785 aa9.18□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Znf521Q6KAS7 1311 aa9.18□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Tarbp1E9Q368 1579 aa9.18□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Ccar1Q8CH18 1146 aaKnown RBP9.18□□□□□ -0.94
Bdnf-204ENSMUST00000111044 EzrP26040 586 aaKnown RBP9.18□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Spag9Q58A65 1321 aaKnown RBP9.18□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Nectin2P32507 530 aa9.17□□□□□ -0.94
Bdnf-204ENSMUST00000111044 SkilQ60665 675 aa9.17□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Rnf214Q8BFU3 668 aaKnown RBP9.17□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Os9Q8K2C7 672 aa9.17□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Cd109Q8R422 1442 aa9.17□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Nsfl1cQ9CZ44 370 aaKnown RBP9.17□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Map3k5O35099 1380 aa9.17□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Ddit3P35639 168 aa9.17□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Dync1i1O88485 628 aa9.17□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Cog6Q8R3I3 657 aa9.17□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Arid3cA6PWV5 409 aa9.16□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Kdm4cQ8VCD7 1054 aa9.16□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Rrbp1Q99PL5 1605 aaKnown RBP9.16□□□□□ -0.94
Bdnf-204ENSMUST00000111044 RdxP26043 583 aaKnown RBP9.16□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Pde4cQ3UEI1 686 aa9.16□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Eif4g3Q80XI3 1579 aaKnown RBP9.16□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Trpm2Q91YD4 1506 aa9.16□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Ksr2Q3UVC0 959 aa9.16□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Bloc1s4Q8VED2 215 aa9.16□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Kif7B7ZNG0 1348 aa9.16□□□□□ -0.94
Bdnf-204ENSMUST00000111044 Anp32cQ64G17 123 aa9.15□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms