RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Cep170bQ80U49 1574 aa16.76■□□□□ 0.27
Lig3-202ENSMUST00000080461 Plekhg1F6S200 1446 aa16.76■□□□□ 0.27
Lig3-202ENSMUST00000080461 Stk26Q99JT2 416 aa16.75■□□□□ 0.27
Lig3-202ENSMUST00000080461 Anp32bQ9EST5 272 aaKnown RBP16.74■□□□□ 0.27
Lig3-202ENSMUST00000080461 Cnga1P29974 684 aa16.74■□□□□ 0.27
Lig3-202ENSMUST00000080461 Txndc2Q6P902 515 aa16.73■□□□□ 0.27
Lig3-202ENSMUST00000080461 Psme1P97371 249 aa16.72■□□□□ 0.27
Lig3-202ENSMUST00000080461 Bcl9Q9D219 1425 aa16.71■□□□□ 0.27
Lig3-202ENSMUST00000080461 Utp14aQ640M1 767 aaKnown RBP16.71■□□□□ 0.26
Lig3-202ENSMUST00000080461 Slit3Q9WVB4 1523 aa16.71■□□□□ 0.26
Lig3-202ENSMUST00000080461 Gprasp1Q5U4C1 1347 aa16.7■□□□□ 0.26
Lig3-202ENSMUST00000080461 Aplp2Q06335 707 aa16.7■□□□□ 0.26
Lig3-202ENSMUST00000080461 Abca14E9Q8F8 1683 aa16.7■□□□□ 0.26
Lig3-202ENSMUST00000080461 Tex14Q7M6U3 1450 aa16.69■□□□□ 0.26
Lig3-202ENSMUST00000080461 Calr4Q3TQS0 420 aa16.69■□□□□ 0.26
Lig3-202ENSMUST00000080461 4930407I10RikD3Z5T8 1512 aa16.69■□□□□ 0.26
Lig3-202ENSMUST00000080461 Ofd1Q80Z25 1017 aa16.68■□□□□ 0.26
Lig3-202ENSMUST00000080461 Asxl2Q8BZ32 1370 aa16.67■□□□□ 0.26
Lig3-202ENSMUST00000080461 IghaA0A0A6YXW6 389 aa16.67■□□□□ 0.26
Lig3-202ENSMUST00000080461 Nwd1A6H603 1563 aa16.67■□□□□ 0.26
Lig3-202ENSMUST00000080461 Rad21Q61550 635 aaKnown RBP16.66■□□□□ 0.26
Lig3-202ENSMUST00000080461 NktrP30415 1453 aa16.66■□□□□ 0.26
Lig3-202ENSMUST00000080461 Alpk3Q924C5 1678 aa16.65■□□□□ 0.26
Lig3-202ENSMUST00000080461 Rab3gap2Q8BMG7 1366 aa16.65■□□□□ 0.26
Lig3-202ENSMUST00000080461 Ppp2r1aQ76MZ3 589 aa16.65■□□□□ 0.26
Lig3-202ENSMUST00000080461 Mink1Q9JM52 1308 aa16.65■□□□□ 0.26
Lig3-202ENSMUST00000080461 Atp2b2Q9R0K7 1198 aa16.64■□□□□ 0.25
Lig3-202ENSMUST00000080461 Kif7B7ZNG0 1348 aa16.64■□□□□ 0.25
Lig3-202ENSMUST00000080461 KdrP35918 1367 aa16.64■□□□□ 0.25
Lig3-202ENSMUST00000080461 Zscan21Q07231 555 aa16.64■□□□□ 0.25
Lig3-202ENSMUST00000080461 Dcaf11Q91VU6 549 aa16.64■□□□□ 0.25
Lig3-202ENSMUST00000080461 Cps1Q8C196 1500 aa16.63■□□□□ 0.25
Lig3-202ENSMUST00000080461 Nrxn1Q9CS84 1514 aa16.63■□□□□ 0.25
Lig3-202ENSMUST00000080461 Lmtk3Q5XJV6 1424 aa16.63■□□□□ 0.25
Lig3-202ENSMUST00000080461 PzpQ61838 1495 aa16.63■□□□□ 0.25
Lig3-202ENSMUST00000080461 Arap3Q8R5G7 1538 aa16.62■□□□□ 0.25
Lig3-202ENSMUST00000080461 Pik3r4Q8VD65 1358 aa16.62■□□□□ 0.25
Lig3-202ENSMUST00000080461 Gsto1O09131 240 aa16.61■□□□□ 0.25
Lig3-202ENSMUST00000080461 Zranb1Q7M760 708 aa16.61■□□□□ 0.25
Lig3-202ENSMUST00000080461 Exosc9Q9JHI7 438 aaKnown RBP16.61■□□□□ 0.25
Lig3-202ENSMUST00000080461 Cdk19Q8BWD8 501 aa16.6■□□□□ 0.25
Lig3-202ENSMUST00000080461 GphnQ8BUV3 769 aaKnown RBP16.59■□□□□ 0.25
Lig3-202ENSMUST00000080461 Atf7ipQ7TT18 1306 aa16.59■□□□□ 0.25
Lig3-202ENSMUST00000080461 Esx1O88933 382 aa16.59■□□□□ 0.25
Lig3-202ENSMUST00000080461 Adgrl1Q80TR1 1466 aa16.58■□□□□ 0.24
Lig3-202ENSMUST00000080461 Topaz1E5FYH1 1653 aa16.57■□□□□ 0.24
Lig3-202ENSMUST00000080461 MyclP10166 368 aa16.57■□□□□ 0.24
Lig3-202ENSMUST00000080461 Usp32F8VPZ3 1604 aa16.57■□□□□ 0.24
Lig3-202ENSMUST00000080461 L3mbtl2P59178 703 aa16.56■□□□□ 0.24
Lig3-202ENSMUST00000080461 FanciQ8K368 1330 aa16.56■□□□□ 0.24
Lig3-202ENSMUST00000080461 Scaf11E9PZM7 1456 aaKnown RBP16.52■□□□□ 0.24
Lig3-202ENSMUST00000080461 Pik3c2bE9QAN8 1632 aa16.52■□□□□ 0.24
Lig3-202ENSMUST00000080461 Zfp444Q3TDV8 331 aaKnown RBP16.52■□□□□ 0.23
Lig3-202ENSMUST00000080461 Mak16Q8BGS0 296 aaKnown RBP16.52■□□□□ 0.23
Lig3-202ENSMUST00000080461 HnrnpmQ9D0E1 729 aaKnown RBP16.52■□□□□ 0.23
Lig3-202ENSMUST00000080461 CenpbP27790 599 aa16.51■□□□□ 0.23
Lig3-202ENSMUST00000080461 Kcnh8P59111 1102 aa16.51■□□□□ 0.23
Lig3-202ENSMUST00000080461 MlecQ6ZQI3 291 aaKnown RBP16.51■□□□□ 0.23
Lig3-202ENSMUST00000080461 CrbnQ8C7D2 445 aa16.51■□□□□ 0.23
Lig3-202ENSMUST00000080461 Tnrc6bQ8BKI2 1810 aaKnown RBP16.49■□□□□ 0.23
Lig3-202ENSMUST00000080461 Map3k19E9Q3S4 1311 aa16.49■□□□□ 0.23
Lig3-202ENSMUST00000080461 Nlrp6Q91WS2 869 aa16.49■□□□□ 0.23
Lig3-202ENSMUST00000080461 Rreb1Q3UH06 1700 aaKnown RBP16.49■□□□□ 0.23
Lig3-202ENSMUST00000080461 Cald1E9QA15 768 aaKnown RBP16.48■□□□□ 0.23
Lig3-202ENSMUST00000080461 Sirt1Q923E4 737 aa16.48■□□□□ 0.23
Lig3-202ENSMUST00000080461 PtpruB1AUH1 1446 aa16.48■□□□□ 0.23
Lig3-202ENSMUST00000080461 Ecm2Q5FW85 670 aa16.47■□□□□ 0.23
Lig3-202ENSMUST00000080461 Rimbp3Q3V0F0 1606 aa16.47■□□□□ 0.23
Lig3-202ENSMUST00000080461 NinlQ6ZQ12 1394 aa16.47■□□□□ 0.23
Lig3-202ENSMUST00000080461 IbtkQ6ZPR6 1352 aaKnown RBP16.46■□□□□ 0.23
Lig3-202ENSMUST00000080461 Nolc1E9Q5C9 702 aaKnown RBP16.46■□□□□ 0.23
Lig3-202ENSMUST00000080461 Idi2Q8BFZ6 227 aa16.46■□□□□ 0.23
Lig3-202ENSMUST00000080461 Ppp4r2Q0VGB7 417 aa16.46■□□□□ 0.23
Lig3-202ENSMUST00000080461 Kif20bQ80WE4 1774 aaKnown RBP16.46■□□□□ 0.22
Lig3-202ENSMUST00000080461 D430041D05RikF6ZGR6 1678 aa16.45■□□□□ 0.22
Lig3-202ENSMUST00000080461 Erbb3Q61526 1339 aa16.45■□□□□ 0.22
Lig3-202ENSMUST00000080461 Slc4a3P16283 1227 aa16.44■□□□□ 0.22
Lig3-202ENSMUST00000080461 Q3UJC8 639 aa16.44■□□□□ 0.22
Lig3-202ENSMUST00000080461 Kiaa1107Q80TK0 1369 aa16.44■□□□□ 0.22
Lig3-202ENSMUST00000080461 Neurod2Q62414 383 aa16.43■□□□□ 0.22
Lig3-202ENSMUST00000080461 N4bp2F8VQG7 1678 aaKnown RBP16.43■□□□□ 0.22
Lig3-202ENSMUST00000080461 P2rx7Q9Z1M0 595 aa16.42■□□□□ 0.22
Lig3-202ENSMUST00000080461 Rims2Q9EQZ7 1530 aa16.42■□□□□ 0.22
Lig3-202ENSMUST00000080461 Med1Q925J9 1575 aa16.41■□□□□ 0.22
Lig3-202ENSMUST00000080461 Als2Q920R0 1651 aa16.41■□□□□ 0.22
Lig3-202ENSMUST00000080461 C5P06684 1680 aa16.4■□□□□ 0.22
Lig3-202ENSMUST00000080461 Tcerg1Q8CGF7 1100 aaKnown RBP16.4■□□□□ 0.22
Lig3-202ENSMUST00000080461 CatipB9EKE5 520 aa16.39■□□□□ 0.22
Lig3-202ENSMUST00000080461 Thsd7aQ69ZU6 1645 aa16.39■□□□□ 0.21
Lig3-202ENSMUST00000080461 Kif1aP33173 1695 aa16.38■□□□□ 0.21
Lig3-202ENSMUST00000080461 Phlpp1Q8CHE4 1687 aa16.38■□□□□ 0.21
Lig3-202ENSMUST00000080461 Znf316Q6PGE4 1016 aa16.38■□□□□ 0.21
Lig3-202ENSMUST00000080461 Usp19Q3UJD6 1360 aa16.38■□□□□ 0.21
Lig3-202ENSMUST00000080461 GsdmaQ9EST1 446 aa16.37■□□□□ 0.21
Lig3-202ENSMUST00000080461 Fam71e1A1L3C1 212 aa16.37■□□□□ 0.21
Lig3-202ENSMUST00000080461 Znf335A2A5K6 1337 aa16.36■□□□□ 0.21
Lig3-202ENSMUST00000080461 Mon2Q80TL7 1715 aa16.36■□□□□ 0.21
Lig3-202ENSMUST00000080461 Map4k4P97820 1233 aaKnown RBP16.35■□□□□ 0.21
Lig3-202ENSMUST00000080461 Speer4f1Q9D5Q6 258 aa16.35■□□□□ 0.21
Lig3-202ENSMUST00000080461 Apbb1Q9QXJ1 710 aa16.35■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 1407 ms