RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Scaf11E9PZM7 1456 aaKnown RBP12.31□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Arap3Q8R5G7 1538 aa12.3□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Gm20521D3Z5F7 333 aa12.29□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 CenpbP27790 599 aa12.29□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Znf541Q0GGX2 1363 aa12.29□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Fan1Q69ZT1 1020 aa12.29□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Stk24Q99KH8 431 aa12.29□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Cps1Q8C196 1500 aa12.28□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Kdm2aP59997 1161 aa12.27□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Ercc6l2Q9JIM3 1537 aa12.27□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Pik3c2bE9QAN8 1632 aa12.27□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Gm38655A0A286YDK6 273 aa12.27□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Srpk2O54781 681 aaKnown RBP12.27□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Slit3Q9WVB4 1523 aa12.26□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 IbtkQ6ZPR6 1352 aaKnown RBP12.26□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Mdc1Q5PSV9 1707 aa12.26□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Erich6D3Z6S9 713 aa12.26□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Kif1aP33173 1695 aa12.25□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Rsph4aQ8BYM7 716 aa12.25□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Zmym3Q9JLM4 1370 aa12.24□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Ncbp3Q8BZR9 615 aaKnown RBP12.24□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Dip2bQ3UH60 1574 aa12.24□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Nolc1E9Q5C9 702 aaKnown RBP12.23□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Slc24a1Q91WD8 1130 aa12.23□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Kif7B7ZNG0 1348 aa12.23□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Anp32aO35381 247 aa12.23□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Anp32bQ9EST5 272 aaKnown RBP12.23□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 P2rx7Q9Z1M0 595 aa12.23□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Spef2Q8C9J3 1734 aa12.22□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Kif16bB1AVY7 1312 aa12.22□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 Lmtk3Q5XJV6 1424 aa12.22□□□□□ -0.45
Ctnna1-201ENSMUST00000042345 N4bp2F8VQG7 1678 aaKnown RBP12.21□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 NalcnQ8BXR5 1738 aa12.2□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Tnrc6bQ8BKI2 1810 aaKnown RBP12.19□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Liat1Q810M6 228 aa12.19□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Map4k4P97820 1233 aaKnown RBP12.19□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Esx1O88933 382 aa12.18□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Uspl1Q3ULM6 1089 aa12.18□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 CenpjQ569L8 1344 aa12.18□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Upf2A2AT37 1269 aaKnown RBP12.17□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Plekhh1Q80TI1 1356 aa12.17□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Fam135bQ9DAI6 1403 aa12.17□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 P3h3Q8CG70 732 aa12.17□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 D430041D05RikF6ZGR6 1678 aa12.16□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Med1Q925J9 1575 aa12.16□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Prkrip1Q9CWV6 186 aaKnown RBP12.16□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Uhrf1bp1B2KF50 1429 aa12.16□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Rims2Q9EQZ7 1530 aa12.15□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Wdr43Q6ZQL4 677 aaKnown RBP12.15□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Mon2Q80TL7 1715 aa12.15□□□□□ -0.46
Ctnna1-201ENSMUST00000042345 Zbtb4Q5F293 982 aa12.15□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Als2Q920R0 1651 aa12.14□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Dcaf11Q91VU6 549 aa12.14□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Cald1E9QA15 768 aaKnown RBP12.13□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Fam71e1A1L3C1 212 aa12.13□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Tet3Q8BG87 1668 aa12.13□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Znf521Q6KAS7 1311 aa12.13□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Kdm2bQ6P1G2 1309 aa12.13□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 PtpruB1AUH1 1446 aa12.13□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Scn7aB1AYL1 1681 aa12.12□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Eif5bQ05D44 1216 aaKnown RBP12.12□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 C5P06684 1680 aa12.12□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Afap1Q80YS6 731 aa12.12□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Bcl9Q9D219 1425 aa12.11□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Stag3O70576 1240 aa12.1□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Kcnh8P59111 1102 aa12.1□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Supt16hQ920B9 1047 aa12.1□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Pik3r4Q8VD65 1358 aa12.1□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Ubr1O70481 1757 aa12.1□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Egfem1Q8C088 590 aa12.1□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 IqubQ8CDK3 788 aa12.1□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 IghaA0A0A6YXW6 389 aa12.09□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Ppp1r18Q8BQ30 594 aa12.09□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Kif20bQ80WE4 1774 aaKnown RBP12.09□□□□□ -0.47
Ctnna1-201ENSMUST00000042345 Mbd3Q9Z2D8 285 aaKnown RBP12.08□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Chd4Q6PDQ2 1915 aaKnown RBP12.08□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Atp7bQ64446 1462 aa12.07□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Ralbp1Q62172 648 aa12.07□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 CrbnQ8C7D2 445 aa12.07□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Os9Q8K2C7 672 aa12.07□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Pik3c2aQ61194 1686 aa12.07□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Shq1Q7TMX5 569 aa12.07□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Ccdc30Q8BVF4 654 aa12.06□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Ppp4r2Q0VGB7 417 aa12.06□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Trim28Q62318 834 aa12.06□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Dnajc5gQ8C632 165 aa12.06□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Rreb1Q3UH06 1700 aaKnown RBP12.05□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 NinlQ6ZQ12 1394 aa12.05□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Map3k19E9Q3S4 1311 aa12.05□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 PtprvP70289 1705 aa12.04□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Tcerg1Q8CGF7 1100 aaKnown RBP12.04□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Golga2Q921M4 999 aa12.04□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Thsd7aQ69ZU6 1645 aa12.04□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Gsto1O09131 240 aa12.04□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 4930407I10RikD3Z5T8 1512 aa12.03□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 FanciQ8K368 1330 aa12.03□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 GsdmaQ9EST1 446 aa12.03□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Map2P20357 1828 aa12.03□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Sirt1Q923E4 737 aa12.03□□□□□ -0.48
Ctnna1-201ENSMUST00000042345 Col16a1Q8BLX7 1580 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms