RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Trappc8E9PWG2 1437 aa16.7■□□□□ 0.26
Vps35-201ENSMUST00000034131 Tmx3Q8BXZ1 456 aa16.69■□□□□ 0.26
Vps35-201ENSMUST00000034131 TimelessQ9R1X4 1197 aa16.69■□□□□ 0.26
Vps35-201ENSMUST00000034131 Gm10093D3YYI8 482 aa16.69■□□□□ 0.26
Vps35-201ENSMUST00000034131 Hdac1O09106 482 aaKnown RBP16.69■□□□□ 0.26
Vps35-201ENSMUST00000034131 Gys2Q8VCB3 704 aa16.69■□□□□ 0.26
Vps35-201ENSMUST00000034131 PtprgQ05909 1442 aa16.69■□□□□ 0.26
Vps35-201ENSMUST00000034131 Cd109Q8R422 1442 aa16.68■□□□□ 0.26
Vps35-201ENSMUST00000034131 Rbm25B2RY56 838 aaKnown RBP16.68■□□□□ 0.26
Vps35-201ENSMUST00000034131 Rangap1P46061 589 aaKnown RBP16.68■□□□□ 0.26
Vps35-201ENSMUST00000034131 GorabQ8BRM2 368 aa16.68■□□□□ 0.26
Vps35-201ENSMUST00000034131 Rapgef6Q5NCJ1 1609 aa16.66■□□□□ 0.26
Vps35-201ENSMUST00000034131 WizO88286 1684 aaKnown RBP16.66■□□□□ 0.26
Vps35-201ENSMUST00000034131 Ccar1Q8CH18 1146 aaKnown RBP16.66■□□□□ 0.26
Vps35-201ENSMUST00000034131 Lmod3E9QA62 571 aa16.65■□□□□ 0.26
Vps35-201ENSMUST00000034131 Casq1O09165 405 aa16.65■□□□□ 0.26
Vps35-201ENSMUST00000034131 Tfip11Q9ERA6 838 aaKnown RBP16.65■□□□□ 0.26
Vps35-201ENSMUST00000034131 Ythdc1E9Q5K9 736 aaKnown RBP16.65■□□□□ 0.26
Vps35-201ENSMUST00000034131 Nectin2P32507 530 aa16.65■□□□□ 0.26
Vps35-201ENSMUST00000034131 Nup160Q9Z0W3 1402 aaKnown RBP16.64■□□□□ 0.25
Vps35-201ENSMUST00000034131 Hs1bp3Q3TC93 395 aa16.64■□□□□ 0.25
Vps35-201ENSMUST00000034131 Gzf1Q4VBD9 706 aa16.64■□□□□ 0.25
Vps35-201ENSMUST00000034131 Bag4Q8CI61 457 aa16.64■□□□□ 0.25
Vps35-201ENSMUST00000034131 Grin2aP35436 1464 aa16.64■□□□□ 0.25
Vps35-201ENSMUST00000034131 Atp7aQ64430 1491 aa16.64■□□□□ 0.25
Vps35-201ENSMUST00000034131 Erich6D3Z6S9 713 aa16.64■□□□□ 0.25
Vps35-201ENSMUST00000034131 AU019823E9PUQ3 292 aa16.64■□□□□ 0.25
Vps35-201ENSMUST00000034131 Map4k4P97820 1233 aaKnown RBP16.64■□□□□ 0.25
Vps35-201ENSMUST00000034131 SkilQ60665 675 aa16.64■□□□□ 0.25
Vps35-201ENSMUST00000034131 Plppr3Q7TPB0 716 aa16.64■□□□□ 0.25
Vps35-201ENSMUST00000034131 Pabpn1Q8CCS6 302 aaKnown RBP16.63■□□□□ 0.25
Vps35-201ENSMUST00000034131 Kiaa1107Q80TK0 1369 aa16.63■□□□□ 0.25
Vps35-201ENSMUST00000034131 Dmrtc1Q9D9R7 182 aa16.62■□□□□ 0.25
Vps35-201ENSMUST00000034131 Ppp1r3fQ9JIG4 799 aa16.62■□□□□ 0.25
Vps35-201ENSMUST00000034131 ScaperF8VQ70 1398 aaKnown RBP16.62■□□□□ 0.25
Vps35-201ENSMUST00000034131 MsnP26041 577 aaKnown RBP16.62■□□□□ 0.25
Vps35-201ENSMUST00000034131 Znf330Q922H9 316 aa16.62■□□□□ 0.25
Vps35-201ENSMUST00000034131 Pank2Q3U4S0 443 aa16.62■□□□□ 0.25
Vps35-201ENSMUST00000034131 Myom2Q14BI5 1463 aa16.62■□□□□ 0.25
Vps35-201ENSMUST00000034131 Bloc1s4Q8VED2 215 aa16.61■□□□□ 0.25
Vps35-201ENSMUST00000034131 Magi3Q9EQJ9 1476 aa16.61■□□□□ 0.25
Vps35-201ENSMUST00000034131 GsdmaQ9EST1 446 aa16.61■□□□□ 0.25
Vps35-201ENSMUST00000034131 PxdnQ3UQ28 1475 aa16.61■□□□□ 0.25
Vps35-201ENSMUST00000034131 Setd1bQ8CFT2 1985 aa16.61■□□□□ 0.25
Vps35-201ENSMUST00000034131 NcapgE9PWG6 1004 aa16.61■□□□□ 0.25
Vps35-201ENSMUST00000034131 Fam163aQ8CAA5 168 aa16.6■□□□□ 0.25
Vps35-201ENSMUST00000034131 Lrrc9Q8CDN9 1456 aa16.6■□□□□ 0.25
Vps35-201ENSMUST00000034131 Gm20521D3Z5F7 333 aa16.6■□□□□ 0.25
Vps35-201ENSMUST00000034131 Fam13bQ8K2H3 851 aa16.6■□□□□ 0.25
Vps35-201ENSMUST00000034131 Kdm4cQ8VCD7 1054 aa16.59■□□□□ 0.25
Vps35-201ENSMUST00000034131 4931400O07RikQ9D4M5 137 aa16.59■□□□□ 0.25
Vps35-201ENSMUST00000034131 Col17a1Q07563 1470 aa16.59■□□□□ 0.25
Vps35-201ENSMUST00000034131 Pbrm1Q8BSQ9 1634 aaKnown RBP16.58■□□□□ 0.25
Vps35-201ENSMUST00000034131 ImpactO55091 318 aa16.58■□□□□ 0.25
Vps35-201ENSMUST00000034131 Arhgef11Q68FM7 1552 aa16.58■□□□□ 0.25
Vps35-201ENSMUST00000034131 Apaf1O88879 1249 aa16.58■□□□□ 0.24
Vps35-201ENSMUST00000034131 Adamts12Q811B3 1600 aa16.58■□□□□ 0.24
Vps35-201ENSMUST00000034131 Ncapd2Q8K2Z4 1392 aa16.58■□□□□ 0.24
Vps35-201ENSMUST00000034131 Kiaa1551Q5DTW7 1521 aa16.57■□□□□ 0.24
Vps35-201ENSMUST00000034131 Gtf2e1Q9D0D5 440 aa16.57■□□□□ 0.24
Vps35-201ENSMUST00000034131 Mlh3A0A1Y7VMP7 1443 aa16.57■□□□□ 0.24
Vps35-201ENSMUST00000034131 Cul9Q80TT8 1865 aa16.57■□□□□ 0.24
Vps35-201ENSMUST00000034131 Cnga1P29974 684 aa16.57■□□□□ 0.24
Vps35-201ENSMUST00000034131 Ccdc94Q9D6J3 314 aa16.57■□□□□ 0.24
Vps35-201ENSMUST00000034131 Brd1E9PZ26 1189 aaKnown RBP16.56■□□□□ 0.24
Vps35-201ENSMUST00000034131 Shroom2A2ALU4 1481 aa16.56■□□□□ 0.24
Vps35-201ENSMUST00000034131 Cdc42bpaQ3UU96 1719 aa16.56■□□□□ 0.24
Vps35-201ENSMUST00000034131 Rasa1E9PYG6 1038 aa16.56■□□□□ 0.24
Vps35-201ENSMUST00000034131 Wdr78E9PYY5 807 aa16.55■□□□□ 0.24
Vps35-201ENSMUST00000034131 Kiaa0753Q6A000 959 aa16.55■□□□□ 0.24
Vps35-201ENSMUST00000034131 Ssh2Q5SW75 1423 aa16.55■□□□□ 0.24
Vps35-201ENSMUST00000034131 Aplp1Q03157 653 aa16.55■□□□□ 0.24
Vps35-201ENSMUST00000034131 Pnma3Q8JZW8 466 aa16.54■□□□□ 0.24
Vps35-201ENSMUST00000034131 Magi1Q6RHR9 1471 aa16.54■□□□□ 0.24
Vps35-201ENSMUST00000034131 1700010I14RikQ7TPG0 532 aa16.54■□□□□ 0.24
Vps35-201ENSMUST00000034131 Rnf214Q8BFU3 668 aaKnown RBP16.54■□□□□ 0.24
Vps35-201ENSMUST00000034131 Zkscan1Q8BGS3 561 aaKnown RBP16.54■□□□□ 0.24
Vps35-201ENSMUST00000034131 U2af1Q9D883 239 aaKnown RBP16.54■□□□□ 0.24
Vps35-201ENSMUST00000034131 Rcan3Q9JKK0 239 aa16.54■□□□□ 0.24
Vps35-201ENSMUST00000034131 Nek4Q9Z1J2 792 aa16.54■□□□□ 0.24
Vps35-201ENSMUST00000034131 Fkbp15Q6P9Q6 1216 aaKnown RBP16.53■□□□□ 0.24
Vps35-201ENSMUST00000034131 Maco1Q7TQE6 664 aaKnown RBP16.53■□□□□ 0.24
Vps35-201ENSMUST00000034131 Rps6ka5Q8C050 863 aa16.53■□□□□ 0.24
Vps35-201ENSMUST00000034131 Mindy4Q3UQI9 744 aa16.52■□□□□ 0.24
Vps35-201ENSMUST00000034131 Tbc1d9Q3UYK3 1264 aa16.52■□□□□ 0.24
Vps35-201ENSMUST00000034131 Caskin1Q6P9K8 1431 aa16.52■□□□□ 0.24
Vps35-201ENSMUST00000034131 Ppip5k1A2ARP1 1436 aa16.52■□□□□ 0.23
Vps35-201ENSMUST00000034131 Syce3B5KM66 88 aa16.51■□□□□ 0.23
Vps35-201ENSMUST00000034131 Dnajc5P60904 198 aa16.51■□□□□ 0.23
Vps35-201ENSMUST00000034131 Cbx1P83917 185 aaKnown RBP16.51■□□□□ 0.23
Vps35-201ENSMUST00000034131 Stk11ipQ3TAA7 1072 aa16.51■□□□□ 0.23
Vps35-201ENSMUST00000034131 Ccdc60Q8C4J0 545 aa16.51■□□□□ 0.23
Vps35-201ENSMUST00000034131 Zscan25B2RX31 543 aa16.5■□□□□ 0.23
Vps35-201ENSMUST00000034131 Rbm27Q5SFM8 1060 aaKnown RBP16.5■□□□□ 0.23
Vps35-201ENSMUST00000034131 Cetn4Q8K4K1 168 aa16.5■□□□□ 0.23
Vps35-201ENSMUST00000034131 Adamts13Q769J6 1426 aa16.5■□□□□ 0.23
Vps35-201ENSMUST00000034131 Kif3aP28741 701 aa16.5■□□□□ 0.23
Vps35-201ENSMUST00000034131 Nutm1Q8BHP2 1126 aa16.5■□□□□ 0.23
Vps35-201ENSMUST00000034131 Gripap1Q8VD04 806 aa16.5■□□□□ 0.23
Vps35-201ENSMUST00000034131 Dnajc14Q921R4 703 aa16.5■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms