RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 ErbinQ80TH2 1402 aa17.67■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 Myo3aQ8K3H5 1613 aa17.67■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 Rab3gap2Q8BMG7 1366 aa17.67■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 Mak16Q8BGS0 296 aaKnown RBP17.66■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 Dnttip2Q8R2M2 758 aaKnown RBP17.66■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 Usp32F8VPZ3 1604 aa17.65■□□□□ 0.42
Prpf38b-201ENSMUST00000029480 DmtnQ9WV69 405 aa17.64■□□□□ 0.41
Prpf38b-201ENSMUST00000029480 Knl1Q66JQ7 1612 aa17.64■□□□□ 0.41
Prpf38b-201ENSMUST00000029480 NeflP08551 543 aa17.64■□□□□ 0.41
Prpf38b-201ENSMUST00000029480 Dnajc5gQ8C632 165 aa17.63■□□□□ 0.41
Prpf38b-201ENSMUST00000029480 InsrP15208 1372 aa17.62■□□□□ 0.41
Prpf38b-201ENSMUST00000029480 PalldQ9ET54 1408 aa17.61■□□□□ 0.41
Prpf38b-201ENSMUST00000029480 Nrxn1Q9CS84 1514 aa17.61■□□□□ 0.41
Prpf38b-201ENSMUST00000029480 Ofd1Q80Z25 1017 aa17.59■□□□□ 0.41
Prpf38b-201ENSMUST00000029480 Prkrip1Q9CWV6 186 aaKnown RBP17.59■□□□□ 0.41
Prpf38b-201ENSMUST00000029480 PplQ9R269 1755 aa17.59■□□□□ 0.41
Prpf38b-201ENSMUST00000029480 Zscan10Q3URR7 782 aa17.58■□□□□ 0.41
Prpf38b-201ENSMUST00000029480 Fbxo3Q9DC63 480 aa17.58■□□□□ 0.41
Prpf38b-201ENSMUST00000029480 Mdc1Q5PSV9 1707 aa17.57■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Fam135bQ9DAI6 1403 aa17.57■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 AatkQ80YE4 1365 aa17.57■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Pdcl3Q8BVF2 240 aa17.56■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Chrna2Q91X60 512 aa17.56■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Slc52a2Q9D8F3 450 aa17.56■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Zc3h13E9Q784 1729 aaKnown RBP17.56■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Ahdc1Q6PAL7 1594 aaKnown RBP17.56■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Rims2Q9EQZ7 1530 aa17.55■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Plekhg1F6S200 1446 aa17.55■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Afap1Q80YS6 731 aa17.55■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Iqsec2Q5DU25 1478 aa17.55■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Pak3Q61036 559 aa17.54■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Alpk3Q924C5 1678 aa17.54■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Plekhh1Q80TI1 1356 aa17.53■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Tcerg1Q8CGF7 1100 aaKnown RBP17.53■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Srcin1Q9QWI6 1250 aa17.53■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Slc4a3P16283 1227 aa17.53■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Spef2Q8C9J3 1734 aa17.52■□□□□ 0.4
Prpf38b-201ENSMUST00000029480 Mroh3A0A1D5RM54 893 aa17.51■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Fam184bQ0KK56 942 aa17.51■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Ifit1bl1D3Z6F0 470 aa17.5■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Gemin5Q8BX17 1502 aaKnown RBP17.5■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Itsn1Q9Z0R4 1714 aa17.5■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Arhgef28P97433 1693 aa17.5■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Lmtk3Q5XJV6 1424 aa17.49■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Dip2bQ3UH60 1574 aa17.49■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Lrrc7Q80TE7 1490 aa17.48■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 L3mbtl2P59178 703 aa17.48■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Liat1Q810M6 228 aa17.48■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Rpgrip1lQ8CG73 1264 aa17.48■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Samd1D3YXK1 519 aa17.47■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Grwd1Q810D6 446 aaKnown RBP17.47■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Hsp90aa1P07901 733 aaKnown RBP17.47■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Pank3Q8R2W9 370 aa17.47■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Kif13aQ9EQW7 1749 aa17.46■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Armcx1Q9CX83 456 aa17.46■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Sall3Q62255 1320 aa17.46■□□□□ 0.39
Prpf38b-201ENSMUST00000029480 Erich6D3Z6S9 713 aa17.45■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Kcnh8P59111 1102 aa17.45■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Map4k4P97820 1233 aaKnown RBP17.45■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Zfp444Q3TDV8 331 aaKnown RBP17.45■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Gtf2a1Q99PM3 378 aa17.45■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Ppp2r1aQ76MZ3 589 aa17.44■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 PtprmP28828 1452 aa17.44■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Kif1aP33173 1695 aa17.43■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Erbb3Q61526 1339 aa17.43■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Chd2E9PZM4 1827 aaKnown RBP17.42■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Bcl9Q9D219 1425 aa17.42■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Usp19Q3UJD6 1360 aa17.42■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Tmc1Q8R4P5 757 aa17.41■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Stk24Q99KH8 431 aa17.41■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Zbtb4Q5F293 982 aa17.4■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Ciz1Q8VEH2 845 aa17.4■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Ercc6l2Q9JIM3 1537 aa17.4■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Gtf2e1Q9D0D5 440 aa17.39■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Dip2aQ8BWT5 1523 aa17.39■□□□□ 0.38
Prpf38b-201ENSMUST00000029480 Naip7Q9JIB3 1402 aa17.39■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Kif16bB1AVY7 1312 aa17.38■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Ralbp1Q62172 648 aa17.38■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 DekQ7TNV0 380 aaKnown RBP17.38■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Uhrf1bp1B2KF50 1429 aa17.38■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Prrc2bQ7TPM1 1486 aaKnown RBP17.38■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Znf326O88291 580 aa17.37■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Arap3Q8R5G7 1538 aa17.37■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Egfem1Q8C088 590 aa17.37■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Scaf11E9PZM7 1456 aaKnown RBP17.37■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Nwd1A6H603 1563 aa17.36■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Zfp91Q62511 572 aa17.35■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Q8BT18 775 aa17.35■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Inpp5dQ9ES52 1191 aa17.35■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 AU022751B1B0V2 589 aa17.34■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Kdm2bQ6P1G2 1309 aa17.34■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 NktrP30415 1453 aa17.34■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Ythdc1E9Q5K9 736 aaKnown RBP17.34■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 IbtkQ6ZPR6 1352 aaKnown RBP17.33■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Safb2Q80YR5 991 aaKnown RBP17.33■□□□□ 0.37
Prpf38b-201ENSMUST00000029480 Cps1Q8C196 1500 aa17.33■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 Ipo9Q91YE6 1041 aa17.32■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 Rrp9Q91WM3 475 aaKnown RBP17.32■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 Mapk8ip3Q9ESN9 1337 aa17.31■□□□□ 0.36
Prpf38b-201ENSMUST00000029480 4930407I10RikD3Z5T8 1512 aa17.31■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms