RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Mapk8ip3Q9ESN9 1337 aa22.83■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Gtf3c3Q3TMP1 882 aa22.83■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Trim58Q5NCC9 485 aa22.82■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Col17a1Q07563 1470 aa22.82■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Myo3aQ8K3H5 1613 aa22.82■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Nectin2P32507 530 aa22.81■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Cald1E9QA15 768 aaKnown RBP22.8■■□□□ 1.24
Ptpra-201ENSMUST00000028769 AU022751B1B0V2 589 aa22.8■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Shq1Q7TMX5 569 aa22.8■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Plcd4Q8K3R3 807 aa22.8■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Dusp27Q148W8 1138 aa22.79■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Tmco5bQ80X59 307 aa22.79■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Robo2Q7TPD3 1470 aa22.79■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Mfap1aC0HKD8 439 aaKnown RBP22.77■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Mfap1bC0HKD9 439 aaKnown RBP22.77■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Stard8Q8K031 1019 aa22.77■■□□□ 1.24
Ptpra-201ENSMUST00000028769 Aplp1Q03157 653 aa22.75■■□□□ 1.23
Ptpra-201ENSMUST00000028769 Mre11Q61216 706 aa22.74■■□□□ 1.23
Ptpra-201ENSMUST00000028769 NhsB1AV60 1647 aa22.74■■□□□ 1.23
Ptpra-201ENSMUST00000028769 Q9D9H8 365 aa22.74■■□□□ 1.23
Ptpra-201ENSMUST00000028769 Birc3O08863 600 aa22.74■■□□□ 1.23
Ptpra-201ENSMUST00000028769 Ccdc60Q8C4J0 545 aa22.74■■□□□ 1.23
Ptpra-201ENSMUST00000028769 Kidins220E9Q9B7 1793 aa22.73■■□□□ 1.23
Ptpra-201ENSMUST00000028769 Tnpo1Q8BFY9 898 aaKnown RBP22.7■■□□□ 1.23
Ptpra-201ENSMUST00000028769 Ttc41Q692V3 1318 aa22.7■■□□□ 1.23
Ptpra-201ENSMUST00000028769 Igf1rQ60751 1373 aa22.7■■□□□ 1.22
Ptpra-201ENSMUST00000028769 Ptch1Q61115 1434 aa22.7■■□□□ 1.22
Ptpra-201ENSMUST00000028769 Utp14aQ640M1 767 aaKnown RBP22.7■■□□□ 1.22
Ptpra-201ENSMUST00000028769 Plppr3Q7TPB0 716 aa22.7■■□□□ 1.22
Ptpra-201ENSMUST00000028769 IbtkQ6ZPR6 1352 aaKnown RBP22.69■■□□□ 1.22
Ptpra-201ENSMUST00000028769 Ccar1Q8CH18 1146 aaKnown RBP22.69■■□□□ 1.22
Ptpra-201ENSMUST00000028769 CenpjQ569L8 1344 aa22.69■■□□□ 1.22
Ptpra-201ENSMUST00000028769 Pdcd11Q6NS46 1862 aaKnown RBP22.68■■□□□ 1.22
Ptpra-201ENSMUST00000028769 Map4k4P97820 1233 aaKnown RBP22.68■■□□□ 1.22
Ptpra-201ENSMUST00000028769 Abca8bQ8K440 1620 aa22.67■■□□□ 1.22
Ptpra-201ENSMUST00000028769 Nphp4P59240 1425 aa22.67■■□□□ 1.22
Ptpra-201ENSMUST00000028769 Xrn1P97789 1719 aaKnown RBP22.67■■□□□ 1.22
Ptpra-201ENSMUST00000028769 Abca6Q8K441 1624 aa22.67■■□□□ 1.22
Ptpra-201ENSMUST00000028769 Pola1P33609 1465 aa22.65■■□□□ 1.22
Ptpra-201ENSMUST00000028769 PtprtQ99M80 1454 aa22.65■■□□□ 1.22
Ptpra-201ENSMUST00000028769 AU019823E9PUQ3 292 aa22.65■■□□□ 1.22
Ptpra-201ENSMUST00000028769 Ppp2r3aB2RXC8 1150 aa22.64■■□□□ 1.22
Ptpra-201ENSMUST00000028769 Chd1P40201 1711 aa22.64■■□□□ 1.21
Ptpra-201ENSMUST00000028769 1700019A02RikA0A087WPV9 146 aa22.64■■□□□ 1.21
Ptpra-201ENSMUST00000028769 Kdm5aQ3UXZ9 1690 aa22.64■■□□□ 1.21
Ptpra-201ENSMUST00000028769 Ppp1r9bQ6R891 817 aaKnown RBP22.63■■□□□ 1.21
Ptpra-201ENSMUST00000028769 Vsig10D3YX43 558 aa22.63■■□□□ 1.21
Ptpra-201ENSMUST00000028769 Atp2b2Q9R0K7 1198 aa22.63■■□□□ 1.21
Ptpra-201ENSMUST00000028769 Nos1Q9Z0J4 1429 aa22.62■■□□□ 1.21
Ptpra-201ENSMUST00000028769 Scaf11E9PZM7 1456 aaKnown RBP22.62■■□□□ 1.21
Ptpra-201ENSMUST00000028769 Maco1Q7TQE6 664 aaKnown RBP22.62■■□□□ 1.21
Ptpra-201ENSMUST00000028769 Ccdc9Q8VC31 543 aaKnown RBP22.62■■□□□ 1.21
Ptpra-201ENSMUST00000028769 Rbm25B2RY56 838 aaKnown RBP22.61■■□□□ 1.21
Ptpra-201ENSMUST00000028769 U2surpQ6NV83 1029 aaKnown RBP22.61■■□□□ 1.21
Ptpra-201ENSMUST00000028769 AnkarA2RT91 1465 aa22.61■■□□□ 1.21
Ptpra-201ENSMUST00000028769 Hecw1Q8K4P8 1604 aa22.59■■□□□ 1.21
Ptpra-201ENSMUST00000028769 Uggt2E9Q4X2 1504 aa22.59■■□□□ 1.21
Ptpra-201ENSMUST00000028769 GorabQ8BRM2 368 aa22.59■■□□□ 1.21
Ptpra-201ENSMUST00000028769 Neurl4Q5NCX5 1563 aa22.58■■□□□ 1.21
Ptpra-201ENSMUST00000028769 Slc12a5Q91V14 1138 aa22.58■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Mcm10Q0VBD2 885 aa22.57■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Pibf1E9Q6K3 756 aa22.57■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Cdk19Q8BWD8 501 aa22.57■■□□□ 1.2
Ptpra-201ENSMUST00000028769 PalmQ9Z0P4 383 aa22.57■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Asxl2Q8BZ32 1370 aa22.56■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Zfyve16Q80U44 1528 aa22.56■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Znf518aB2RRF6 1478 aaKnown RBP22.56■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Rfx1P48377 963 aa22.55■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Cog6Q8R3I3 657 aa22.55■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Cfap65Q3V0B4 1847 aa22.55■■□□□ 1.2
Ptpra-201ENSMUST00000028769 G3bp1P97855 465 aaKnown RBP22.55■■□□□ 1.2
Ptpra-201ENSMUST00000028769 NgefQ8CHT1 710 aa22.55■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Gprasp1Q5U4C1 1347 aa22.54■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Clasp1Q80TV8 1535 aaKnown RBP22.54■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Gsto1O09131 240 aa22.53■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Afap1Q80YS6 731 aa22.53■■□□□ 1.2
Ptpra-201ENSMUST00000028769 OvosQ3UU35 1456 aa22.53■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Znf521Q6KAS7 1311 aa22.53■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Sptbn5F6UCX4 1208 aa22.53■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Lrrc7Q80TE7 1490 aa22.53■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Stk11ipQ3TAA7 1072 aa22.53■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Itsn2Q9Z0R6 1659 aa22.52■■□□□ 1.2
Ptpra-201ENSMUST00000028769 CastP51125 788 aa22.52■■□□□ 1.2
Ptpra-201ENSMUST00000028769 Myo5cE9Q1F5 1742 aa22.52■■□□□ 1.2
Ptpra-201ENSMUST00000028769 NinlQ6ZQ12 1394 aa22.51■■□□□ 1.19
Ptpra-201ENSMUST00000028769 Rims1Q99NE5 1463 aa22.51■■□□□ 1.19
Ptpra-201ENSMUST00000028769 Gli2Q0VGT2 1544 aa22.5■■□□□ 1.19
Ptpra-201ENSMUST00000028769 Iqgap3F8VQ29 1632 aa22.49■■□□□ 1.19
Ptpra-201ENSMUST00000028769 PalldQ9ET54 1408 aa22.49■■□□□ 1.19
Ptpra-201ENSMUST00000028769 Kif18aQ91WD7 886 aa22.49■■□□□ 1.19
Ptpra-201ENSMUST00000028769 Plcb2A3KGF7 1181 aa22.48■■□□□ 1.19
Ptpra-201ENSMUST00000028769 Klhdc4Q921I2 584 aa22.48■■□□□ 1.19
Ptpra-201ENSMUST00000028769 Cavin4A2AMM0 362 aa22.48■■□□□ 1.19
Ptpra-201ENSMUST00000028769 Htatsf1Q8BGC0 757 aa22.47■■□□□ 1.19
Ptpra-201ENSMUST00000028769 Abca9Q8K449 1623 aa22.47■■□□□ 1.19
Ptpra-201ENSMUST00000028769 InsrP15208 1372 aa22.47■■□□□ 1.19
Ptpra-201ENSMUST00000028769 Rabep1O35551 862 aa22.46■■□□□ 1.19
Ptpra-201ENSMUST00000028769 Efcab6Q6P1E8 1516 aa22.46■■□□□ 1.19
Ptpra-201ENSMUST00000028769 DekQ7TNV0 380 aaKnown RBP22.46■■□□□ 1.19
Ptpra-201ENSMUST00000028769 Catsper2A2ARP9 588 aa22.46■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms