RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C UFD4P33202 1483 aa1.04□□□□□ -2.24
CTF18YMR078C YRF1-2P40105 1681 aa1.04□□□□□ -2.24
CTF18YMR078C ADK1P07170 222 aaKnown RBP1.04□□□□□ -2.24
CTF18YMR078C YER187WP40102 141 aa1.04□□□□□ -2.24
CTF18YMR078C YLR042CQ07990 161 aa1.04□□□□□ -2.24
CTF18YMR078C MMS22Q06164 1454 aa1.04□□□□□ -2.24
CTF18YMR078C BLM10P43583 2143 aa1.03□□□□□ -2.24
CTF18YMR078C YEA6P39953 335 aa1.03□□□□□ -2.24
CTF18YMR078C YIR020CP40575 100 aa1.03□□□□□ -2.24
CTF18YMR078C BCK1Q01389 1478 aa1.03□□□□□ -2.24
CTF18YMR078C XRN1P22147 1528 aaKnown RBP1.03□□□□□ -2.24
CTF18YMR078C YRF1-1P0CX20 1796 aa1.03□□□□□ -2.24
CTF18YMR078C YRF1-5P0CX21 1796 aa1.03□□□□□ -2.24
CTF18YMR078C YRF1-8P0CX22 1796 aa1.03□□□□□ -2.24
CTF18YMR078C APS2Q00381 147 aa1.03□□□□□ -2.25
CTF18YMR078C POL1P13382 1468 aa1.03□□□□□ -2.25
CTF18YMR078C PDR10P51533 1564 aa1.03□□□□□ -2.25
CTF18YMR078C TY1B-BRQ12193 1756 aa1.02□□□□□ -2.25
CTF18YMR078C TY1B-GR3Q12316 1755 aa1.02□□□□□ -2.25
CTF18YMR078C TY1B-ORQ92393 1755 aa1.02□□□□□ -2.25
CTF18YMR078C STU1P38198 1513 aa1.02□□□□□ -2.25
CTF18YMR078C MYO4P32492 1471 aa1.02□□□□□ -2.25
CTF18YMR078C TOP2P06786 1428 aaKnown RBP1.02□□□□□ -2.25
CTF18YMR078C HMRA2P0CY13 119 aa1.02□□□□□ -2.25
CTF18YMR078C RPL22BP56628 122 aaKnown RBP1.02□□□□□ -2.25
CTF18YMR078C ARO1P08566 1588 aaKnown RBP1.02□□□□□ -2.25
CTF18YMR078C NUP159P40477 1460 aa1.02□□□□□ -2.25
CTF18YMR078C YCR099CP25657 155 aa1.01□□□□□ -2.25
CTF18YMR078C VPS55P47111 140 aa1.01□□□□□ -2.25
CTF18YMR078C SNN1P48232 102 aa1.01□□□□□ -2.25
CTF18YMR078C YOR304C-AO14468 76 aa1□□□□□ -2.25
CTF18YMR078C RUB1Q03919 77 aa1□□□□□ -2.25
CTF18YMR078C SMC4Q12267 1418 aa1□□□□□ -2.25
CTF18YMR078C BUD3P25558 1636 aa1□□□□□ -2.25
CTF18YMR078C YIR021W-AQ3E739 70 aa1□□□□□ -2.25
CTF18YMR078C TY3B-GQ99315 1547 aa1□□□□□ -2.25
CTF18YMR078C SEC7P11075 2009 aaKnown RBP1□□□□□ -2.25
CTF18YMR078C SPP41P38904 1435 aa0.99□□□□□ -2.25
CTF18YMR078C USO1P25386 1790 aa0.99□□□□□ -2.25
CTF18YMR078C PAM16P42949 149 aa0.99□□□□□ -2.25
CTF18YMR078C RPO21P04050 1733 aaKnown RBP0.99□□□□□ -2.25
CTF18YMR078C BRR2P32639 2163 aaKnown RBP0.99□□□□□ -2.25
CTF18YMR078C GCN2P15442 1659 aa0.99□□□□□ -2.25
CTF18YMR078C YLR363W-AQ3E747 85 aa0.99□□□□□ -2.25
CTF18YMR078C DAD1Q12248 94 aa0.98□□□□□ -2.25
CTF18YMR078C MLP2P40457 1679 aa0.98□□□□□ -2.25
CTF18YMR078C URB1P34241 1764 aaKnown RBP0.98□□□□□ -2.25
CTF18YMR078C VMR1P38735 1592 aa0.97□□□□□ -2.25
CTF18YMR078C CUP1-1P0CX80 61 aa0.97□□□□□ -2.25
CTF18YMR078C CUP1-2P0CX81 61 aa0.97□□□□□ -2.25
CTF18YMR078C TY1B-DR5P0C2I2 1755 aa0.97□□□□□ -2.25
CTF18YMR078C TY1B-DR6P0C2I3 1755 aa0.97□□□□□ -2.25
CTF18YMR078C TY1B-LR2P0C2I5 1755 aa0.97□□□□□ -2.25
CTF18YMR078C TY1B-LR3P0C2I6 1755 aaKnown RBP0.97□□□□□ -2.25
CTF18YMR078C TY1B-PR1P0C2I9 1755 aaKnown RBP0.97□□□□□ -2.25
CTF18YMR078C TY1B-PR2P0C2J0 1756 aa0.97□□□□□ -2.25
CTF18YMR078C TY1B-PR3P0C2J1 1755 aaKnown RBP0.97□□□□□ -2.25
CTF18YMR078C TY1B-JR1P47098 1755 aa0.97□□□□□ -2.25
CTF18YMR078C TY1B-ML2Q03434 1755 aaKnown RBP0.97□□□□□ -2.25
CTF18YMR078C TY1B-ER1Q03612 1755 aa0.97□□□□□ -2.25
CTF18YMR078C TY1B-ML1Q04711 1755 aaKnown RBP0.97□□□□□ -2.25
CTF18YMR078C TY1B-GR2Q12269 1755 aa0.97□□□□□ -2.25
CTF18YMR078C TY1B-OLQ12273 1755 aa0.97□□□□□ -2.25
CTF18YMR078C TY1B-PLQ12414 1755 aaKnown RBP0.97□□□□□ -2.25
CTF18YMR078C YER137CP40083 148 aaKnown RBP0.97□□□□□ -2.25
CTF18YMR078C PDR5P33302 1511 aaKnown RBP0.97□□□□□ -2.25
CTF18YMR078C YBT1P32386 1661 aa0.96□□□□□ -2.26
CTF18YMR078C SNQ2P32568 1501 aaKnown RBP0.96□□□□□ -2.26
CTF18YMR078C LHP1P33399 275 aaKnown RBP0.96□□□□□ -2.26
CTF18YMR078C TY2B-LR1P0C2J3 1770 aa0.96□□□□□ -2.26
CTF18YMR078C TY2B-FP0CX63 1770 aa0.96□□□□□ -2.26
CTF18YMR078C TY2B-GR2P0CX64 1770 aa0.96□□□□□ -2.26
CTF18YMR078C TY2B-CP25384 1770 aa0.96□□□□□ -2.26
CTF18YMR078C TY2B-DR2Q03494 1770 aa0.96□□□□□ -2.26
CTF18YMR078C TY1B-DR1Q03855 1755 aa0.96□□□□□ -2.26
CTF18YMR078C TY2B-DR3Q07791 1770 aaKnown RBP0.96□□□□□ -2.26
CTF18YMR078C TY2B-OR1Q12113 1770 aa0.96□□□□□ -2.26
CTF18YMR078C TY2B-DR1Q12472 1770 aa0.96□□□□□ -2.26
CTF18YMR078C TY2B-OR2Q12501 1770 aa0.96□□□□□ -2.26
CTF18YMR078C SRB8P25648 1427 aa0.96□□□□□ -2.26
CTF18YMR078C SSN2P38931 1420 aa0.96□□□□□ -2.26
CTF18YMR078C RGI1P40043 161 aaPredicted RBP0.96□□□□□ -2.26
CTF18YMR078C RTR2Q12378 196 aa0.96□□□□□ -2.26
CTF18YMR078C NUP188P52593 1655 aaKnown RBP0.96□□□□□ -2.26
CTF18YMR078C SKI3P17883 1432 aaKnown RBP0.95□□□□□ -2.26
CTF18YMR078C IQG1Q12280 1495 aa0.95□□□□□ -2.26
CTF18YMR078C PDR12Q02785 1511 aa0.94□□□□□ -2.26
CTF18YMR078C FYV7Q12247 151 aa0.94□□□□□ -2.26
CTF18YMR078C YLR365WQ7LIF2 110 aa0.94□□□□□ -2.26
CTF18YMR078C RSF2P46974 1380 aa0.94□□□□□ -2.26
CTF18YMR078C TY2B-BQ12491 1770 aa0.93□□□□□ -2.26
CTF18YMR078C VTH1P40438 1549 aa0.93□□□□□ -2.26
CTF18YMR078C VTH2P40890 1549 aa0.93□□□□□ -2.26
CTF18YMR078C PAU19P0CE85 124 aa0.93□□□□□ -2.26
CTF18YMR078C PAU3P25610 124 aa0.93□□□□□ -2.26
CTF18YMR078C RPS12P48589 143 aaKnown RBP0.93□□□□□ -2.26
CTF18YMR078C YER039C-AP0CD97 72 aa0.93□□□□□ -2.26
CTF18YMR078C TY1B-JR2P47100 1755 aaKnown RBP0.92□□□□□ -2.26
CTF18YMR078C TY1B-ER2Q03619 1755 aa0.92□□□□□ -2.26
CTF18YMR078C TY1B-MR1Q04214 1755 aa0.92□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms