RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 HTR3EA5X5Y0 456 aa18.73■□□□□ 0.59
CHTOP-201ENST00000368686 MEI4A8MW99 385 aa18.73■□□□□ 0.59
CHTOP-201ENST00000368686 ALDH2P05091 517 aa18.73■□□□□ 0.59
CHTOP-201ENST00000368686 BMP3P12645 472 aa18.73■□□□□ 0.59
CHTOP-201ENST00000368686 ALDH1A3P47895 512 aa18.73■□□□□ 0.59
CHTOP-201ENST00000368686 CREB5Q02930 508 aa18.73■□□□□ 0.59
CHTOP-201ENST00000368686 ATG16L1Q676U5 607 aa18.73■□□□□ 0.59
CHTOP-201ENST00000368686 CIAPIN1Q6FI81 312 aa18.73■□□□□ 0.59
CHTOP-201ENST00000368686 ARID3BQ8IVW6 561 aaPredicted RBP18.73■□□□□ 0.59
CHTOP-201ENST00000368686 NLRP4Q96MN2 994 aa18.73■□□□□ 0.59
CHTOP-201ENST00000368686 RSL24D1Q9UHA3 163 aaKnown RBP18.73■□□□□ 0.59
CHTOP-201ENST00000368686 COL24A1Q17RW2 1714 aa18.73■□□□□ 0.59
CHTOP-201ENST00000368686 MATN2O00339 956 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 SERPINB7O75635 380 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 ZSCAN5DPP0CG00 497 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 KLRK1P26718 216 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 SSTR1P30872 391 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 VCPP55072 806 aaKnown RBP18.72■□□□□ 0.59
CHTOP-201ENST00000368686 BTKQ06187 659 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 CNGA3Q16281 694 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 RABGAP1LQ5R372 815 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 PGM2L1Q6PCE3 622 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 ZNF720Q7Z2F6 126 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 RTKN2Q8IZC4 609 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 EXD1Q8NHP7 514 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 SHC3Q92529 594 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 DDX17Q92841 729 aaKnown RBP18.72■□□□□ 0.59
CHTOP-201ENST00000368686 HNRNPABQ99729 332 aaKnown RBP18.72■□□□□ 0.59
CHTOP-201ENST00000368686 C6orf203Q9P0P8 240 aaPredicted RBP18.72■□□□□ 0.59
CHTOP-201ENST00000368686 PPP1R1BQ9UD71 204 aaPredicted RBP18.72■□□□□ 0.59
CHTOP-201ENST00000368686 SF3B1O75533 1304 aaKnown RBP eCLIP18.72■□□□□ 0.59
CHTOP-201ENST00000368686 COL5A2P05997 1499 aaPredicted RBP18.72■□□□□ 0.59
CHTOP-201ENST00000368686 SNHG28P0DPA3 235 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 MFAP3P55082 362 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 SLC25A3Q00325 362 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 MYBPC1Q00872 1141 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 TMEM53Q6P2H8 277 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 ADGRF4Q8IZF3 695 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 RDH13Q8NBN7 331 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 TTC13Q8NBP0 860 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 SHKBP1Q8TBC3 707 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 GPCPD1Q9NPB8 672 aa18.72■□□□□ 0.59
CHTOP-201ENST00000368686 SRGAP2CP0DJJ0 459 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 SRGAP2BP0DMP2 458 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 VAMP7P51809 220 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 AQP5P55064 265 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 DLG4P78352 724 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 CYP4A11Q02928 519 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 PPP3CAQ08209 521 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 PCGF5Q86SE9 256 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 MAPKAPK5Q8IW41 473 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 ACAP3Q96P50 834 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 PHF12Q96QT6 1004 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 PRPF18Q99633 342 aaKnown RBP18.71■□□□□ 0.59
CHTOP-201ENST00000368686 TMOD2Q9NZR1 351 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 SUN2Q9UH99 717 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 DNPEPQ9ULA0 475 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 EFR3BQ9Y2G0 817 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 ITGB4P16144 1822 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 H3BSA7 217 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 PROSCO94903 275 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 C6orf222P0C671 652 aaPredicted RBP18.71■□□□□ 0.59
CHTOP-201ENST00000368686 FAM58BPP0C7Q3 252 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 ATF3P18847 181 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 HALP42357 657 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 EPHB1P54762 984 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 HDAC4P56524 1084 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 PPP4CP60510 307 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 RELAQ04206 551 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 SYCP2LQ5T4T6 812 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 FAM178BQ8IXR5 827 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 ACTRT2Q8TDY3 377 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 TRIM11Q96F44 468 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 KREMEN1Q96MU8 473 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 RILPQ96NA2 401 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 TMEM117Q9H0C3 514 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 PRDM11Q9NQV5 511 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 SLAIN2Q9P270 581 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 CDH22Q9UJ99 828 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 TMEM98Q9Y2Y6 226 aa18.71■□□□□ 0.59
CHTOP-201ENST00000368686 H3BNX3 289 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 CRTAMO95727 393 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 ZBED1O96006 694 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 TSHRP16473 764 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 POLD1P28340 1107 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 GCLMP48507 274 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 CDK9P50750 372 aaKnown RBP18.7■□□□□ 0.58
CHTOP-201ENST00000368686 GSTO1P78417 241 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 PRR16Q569H4 304 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 POTEHQ6S545 545 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 CRLF3Q8IUI8 442 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 CATSPER1Q8NEC5 780 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 FIZ1Q96SL8 496 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 BCS1LQ9Y276 419 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 DRG1Q9Y295 367 aaKnown RBP18.7■□□□□ 0.58
CHTOP-201ENST00000368686 AP4B1Q9Y6B7 739 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 BANF1O75531 89 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 POLR2MP0CAP2 368 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 NAA20P61599 178 aa18.7■□□□□ 0.58
CHTOP-201ENST00000368686 TMPRSS15P98073 1019 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms