RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 JAM2P57087 298 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 TWF1Q12792 350 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 VEPH1Q14D04 833 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 MEA1Q16626 185 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 CCDC142Q17RM4 750 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 PUS10Q3MIT2 529 aaKnown RBP16.3■□□□□ 0.2
SEC13-201ENST00000337354 TJAP1Q5JTD0 557 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 ATAT1Q5SQI0 421 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 LCLAT1Q6UWP7 414 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 GPR149Q86SP6 731 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 FAM35AQ86V20 835 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 ANKRD52Q8NB46 1076 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 SPATA17Q96L03 361 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 ASB2Q96Q27 587 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 DUSP16Q9BY84 665 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 UBXN6Q9BZV1 441 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 ZNF518BQ9C0D4 1074 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 NUCKS1Q9H1E3 243 aaKnown RBP16.3■□□□□ 0.2
SEC13-201ENST00000337354 CSNK1G1Q9HCP0 422 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 FAM49BQ9NUQ9 324 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 EHD2Q9NZN4 543 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 HESX1Q9UBX0 185 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 CD207Q9UJ71 328 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 VWA8A3KMH1 1905 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 A0A1W2PQJ5 194 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 H3BQ06 376 aaPredicted RBP16.29■□□□□ 0.2
SEC13-201ENST00000337354 O00370 1275 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 CLDN5O00501 218 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 CYP26A1O43174 497 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 FAM200BP0CF97 657 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 PTPN2P17706 415 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 ANXA13P27216 316 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 GNA15P30679 374 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 CLCN1P35523 988 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 SOX5P35711 763 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 KCNQ1P51787 676 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 LEXMQ3ZCV2 418 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 SPECC1LQ69YQ0 1117 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 TMC5Q6UXY8 1006 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 SCN4BQ8IWT1 228 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 TTC9BQ8N6N2 239 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 C12orf76Q8N812 135 aaPredicted RBP16.29■□□□□ 0.2
SEC13-201ENST00000337354 LEMD2Q8NC56 503 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 SMRP1Q8NCR6 262 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 ZNF397Q8NF99 534 aaPredicted RBP16.29■□□□□ 0.2
SEC13-201ENST00000337354 ZNF606Q8WXB4 792 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 ZNF707Q96C28 371 aaPredicted RBP16.29■□□□□ 0.2
SEC13-201ENST00000337354 RIPOR3Q96MK2 946 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 TTYH3Q9C0H2 523 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 PIDD1Q9HB75 910 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 PNPLA8Q9NP80 782 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 DMAP1Q9NPF5 467 aaPredicted RBP16.29■□□□□ 0.2
SEC13-201ENST00000337354 UNC80Q8N2C7 3258 aa16.29■□□□□ 0.2
SEC13-201ENST00000337354 AP1G2O75843 785 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 CSH1P0DML2 217 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 CSH2P0DML3 217 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 ATF6P18850 670 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 ADORA2BP29275 332 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 TRIM14Q14142 442 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 CLUL1Q15846 466 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 DDR2Q16832 855 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 RARS2Q5T160 578 aaKnown RBP16.28■□□□□ 0.2
SEC13-201ENST00000337354 DNAJB7Q7Z6W7 309 aaPredicted RBP16.28■□□□□ 0.2
SEC13-201ENST00000337354 VSTM4Q8IW00 320 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 TFAP2BQ92481 460 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 SMG7Q92540 1137 aaKnown RBP16.28■□□□□ 0.2
SEC13-201ENST00000337354 PSMG2Q969U7 264 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 MRFAP1L1Q96HT8 127 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 NECTIN4Q96NY8 510 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 KRT82Q9NSB4 513 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 TSPAN16Q9UKR8 245 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 CAPN11Q9UMQ6 739 aa16.28■□□□□ 0.2
SEC13-201ENST00000337354 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.28■□□□□ 0.2
SEC13-201ENST00000337354 F8VP50 259 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 CCL16O15467 120 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 AP5Z1O43299 807 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 THAP12O43422 761 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 SOAT2O75908 522 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 CYP11B1P15538 503 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 NPR3P17342 541 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 MTHFRP42898 656 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 CDR1P51861 262 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 BCAT1P54687 386 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 TAF12Q16514 161 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 PTPN21Q16825 1174 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 CLEC20AQ6ZU45 233 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 ZNF677Q86XU0 584 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 BAP1Q92560 729 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 KCNK16Q96T55 309 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 SMOQ99835 787 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 AVENQ9NQS1 362 aaPredicted RBP16.27■□□□□ 0.2
SEC13-201ENST00000337354 COMMD8Q9NX08 183 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 FAM50BQ9Y247 325 aa16.27■□□□□ 0.2
SEC13-201ENST00000337354 PLXNA3P51805 1871 aa16.27■□□□□ 0.19
SEC13-201ENST00000337354 GFPT2O94808 682 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 FGF19O95750 216 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 SETSIPP0DME0 302 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 FERP16591 822 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 BRD2P25440 801 aaKnown RBP16.26■□□□□ 0.19
SEC13-201ENST00000337354 KRT9P35527 623 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms